Xanthomonas hydrangeae: LMG31886_27460
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Entry
LMG31886_27460 CDS
T07925
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMG31886_27460 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_27460 (nth)
Enzymes [BR:
xhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMG31886_27460 (nth)
DNA repair and recombination proteins [BR:
xhd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMG31886_27460 (nth)
Prokaryotic type
LMG31886_27460 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
DUF6127
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAD7738333
LinkDB
All DBs
Position
LMG31886:3284196..3284906
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AA seq
236 aa
AA seq
DB search
MNAIRPALPARRGSIMRKPEVQEMFERLRELNPHPTTELEYTTPFELLIAVLLSAQATDV
GVNKATRKLYPVANTPRDILDLGEEGLKRYIATIGLFNAKAKNVIATCRILLEQYAGEVP
HDRAALEALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVANRTGLAPGKDVRVVEDKLVK
VIPAEFLQDAHHWLILHGRYVCKARKPDCPGCVIHDLCRYRDKTVAPTERPPSPRG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgattcgccccgccctgccggcacgtcgcggcagcatcatgcgcaagcccgaa
gtgcaggaaatgttcgaacgcctgcgcgaactcaacccgcacccgaccaccgagctggaa
tacaccaccccgttcgagttgctgatcgccgtgctgctttcggcgcaagccaccgatgtc
ggcgtcaacaaggccacccgcaagctgtacccggtcgccaatacgccgcgcgacattctc
gatctcggcgaagaaggcctgaagcgctacatcgccaccatcggcctgttcaacgccaag
gcaaagaacgtcatcgccacctgtcgtattttgctcgagcaatacgctggagaagtcccg
catgatcgcgcggcgctggaagcattgcccggtgtcggccgcaagaccgccaacgtggtg
ctcaacaccgcattcggcgagcccaccatggcggtggacacgcatatcttccgcgtggcc
aatcgcaccggacttgcgccgggcaaggacgtgcgcgtggtcgaagacaaactggtgaag
gtcattcctgcggagtttctgcaagacgcgcatcactggctcatcctgcatggccgctac
gtctgcaaggcacgcaaaccggattgcccgggctgcgtgatccacgacctgtgccgctat
cgtgacaagaccgtggctccgaccgaacggccgccatctccgcgaggctga
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