Xiphophorus hellerii (green swordtail): 116707493
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Entry
116707493 CDS
T07363
Name
(RefSeq) guanine nucleotide exchange C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116707493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116707493
Membrane trafficking [BR:
xhe04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
116707493
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
116707493
NCBI-ProteinID:
XP_032400749
LinkDB
All DBs
Position
18:complement(4714590..4721122)
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AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKTEVAVEGECPLLAATFAYWDNILGPRVRHMWAPRGEQPMSLSDGEV
TFLANHTLNGEILRNAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSVILPQT
ELAFYLPLHAACVERLTHGIRKGRIWMQKGYNIISVLSLEIAPIMELLASMKSHCVPEEI
DIRDTVLNDDDIGDSCHEGFLHKAISSHLQTCGCSVVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCRASSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYAPYPTTHIDVDINTVKQMP
PCHEHTFNQRRYMRSELNTLWKTDSEDDIPPETVIHTDETFTPDLNIFQDVLHTDTLVRS
FIDEVFLLKPGLALRSSYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRALRNLKADLDL
KAEGDLNIVMAMAEKLRAGLHSFVFGKPFYTSVQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccggctgtcccccccagtccccggccgtagcgaagacagaggtagcggtggag
ggagagtgccccctgctggccgccacctttgcctactgggacaacatcctggggcctcgc
gtgcgccacatgtgggcgccgcgcggcgagcagccgatgtcgctgagcgacggcgaggtc
accttcctggccaaccacacgctgaacggagagatcctgcgcaacgccgagtgcggcgcc
gtggacgtcaagttcttcgtcttggcagagaaaggtgtcatcatcgtgtctctgatcttc
gacggcgagctaaagggcgacaagaacacgtgcgccctgtccgtcatcctgccgcagacc
gagctggccttctacctgccgctgcacgccgcctgcgtggagcggctcacacacggcatc
cgcaaaggacgcatctggatgcagaagggctacaacatcatctcagtgctgagcctggag
atcgcccccatcatggagctgctggcctccatgaagtctcactgcgtgcctgaagaaata
gacatcagagacaccgtgctaaatgatgacgacatcggggacagctgccatgagggcttc
ctccacaaagccatcagctcccatctgcagacgtgcggctgctccgtcgtggtcggaagc
aacccagagaaagtaaacaagatcgtccggacgctctgcctgttcctgactccagctgag
aggaagtgttcccgcctctgccgggccagctcctccttcaagtacgacacgggtctgttc
gtccagggactcctgaaggactccacgggcagcttcgtgctgccgttccgccaggtgctg
tacgcgccgtacccgaccacgcacatcgacgtggacatcaacaccgtgaagcagatgccg
ccgtgccacgaacacaccttcaaccagcggcgctacatgcgctctgagctcaacacgctg
tggaagaccgacagtgaggacgacatcccgccggaaaccgtgatccacacagacgaaacc
ttcactccggacctgaacatcttccaggatgtcctgcataccgacacgttggtcagatcc
ttcatagacgaggtgttcctgctgaagcccggcctggccctcaggagctcctacctggcc
cagttcctgctgctgctgcaccgcaaggcgctcacgctgctcaagtacatcgaggacgag
acgcagaaagggaagaagccgttccgggccctccggaacctgaaggcggacctggacctg
aaggccgagggggacctgaacatcgtcatggcgatggccgagaagctgagggcagggctt
cactccttcgtgttcgggaagccgttctacaccagcgtgcaggagagggacgtgctcatg
agcttctga
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