Xiphophorus hellerii (green swordtail): 116708111
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Entry
116708111 CDS
T07363
Symbol
cep290
Name
(RefSeq) LOW QUALITY PROTEIN: centrosomal protein of 290 kDa
KO
K16533
centrosomal protein CEP290
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116708111 (cep290)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116708111 (cep290)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
116708111 (cep290)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116708111 (cep290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
ATG16
Motif
Other DBs
NCBI-GeneID:
116708111
NCBI-ProteinID:
XP_032401793
LinkDB
All DBs
Position
2:28846480..28914193
Genome browser
AA seq
2434 aa
AA seq
DB search
MPPSGLIWDKVLKIDPKTLDECEKDELDEVFHIFVATKEWEVKDKAKENIIRVLQVGQAL
LKMKEREVKLHESFIDDIGVQHVKTENELRTKVSRLEQERKQLGTGPDSRFLRDEIRQLE
AQLEQREKELTQLSKDMGKEKKTNEELIVRLEEAEDEVKKLKRENEQFQQDVEFYRGELE
QKEPLTSRDDGAEIQRKLSLANRQLYQCLDDLQRAEDENAHLKTQNVQLQRSLEESVKEM
EKMTDEYNKMKIVVQQTDSIMDQLRKERDHTKLQVRELTEKIQSMTEENDPIMAAVNAKV
EEWKKVLSGKDEEILVYQQMIRELREKLRSAQLDLDKSNIIALQQAIQERDNQIKTLSEQ
VEQYTGEMEKHAQLIEELKMSSNKDRGAPSTLQQKKMEELQSKLKVAEARAMEAERAFRQ
AESHAEEKDKAFIEASNRLSQYESGTYGLEAAIAEIKECNNQIRMRDREAEAMTKEINQL
ELRINDLMDENEEFREKLGLEPKQEVDLTEFRRARDLRQRQYKAENQVLAKEIERLEEER
LELKKQIRRMVKEKAVPTGIPQSSVQLEEDVWSSRKEEAQGRIYTDDEIRRKNEYLEKEL
SSKKRELELHKSDFQAQLADLSKAKRDLEATLKDVLQAMRTSQQTGSDSVTASSMKSLSN
ALDVSSLGGQLETGLNSQIHRLVGRNEELRQELKLAREEASSSFSDFIRAKEKVSHLQNE
LELLRKSGGGGVLPRPLTLPEGLGPSSTEVISSLNEYAVRLLQELKNREEKGKKLLETLE
EYKEKFSVISHQQGLLYKEYLSEKAEWQQEKETFTDTKNKLDEQKQVDDVKIQQFNELLD
TLHRDPEEIRRQLSEAFRKLTVLRVNEKKLSRRYSTLLEREQLLRKENGKLRDESSRMQA
SVLQRMGYLQRYKEMAAYKITALQKTLDGSVPASELERANKQYTELTVKYRDVLQKDSLL
VQKTSSLQHLESENESLREQISAVKKELEITKEKLNTLEQAWETVGSVGSETVLAEGDRA
SINSEAISAARRITALEMKELNERQRAEHAHRMYEHMRNSLRQVEERNTELESKFSELTK
MNAEAQRVERELRDMLVDTSSKAASDADKARITELEKAEAELRLEVSKLQEVSDVALSQV
SALQARHKSKDIEVEALRRQILDYQSQSDEKALIAKLHQHMVALQLSESAALGKLEAAAS
HIQRLEANMLRAEQRLDASERALFLARQEGRHRATHLRQTVQALRRQFAGALPLRQQEKF
SLAMLKLQEDRAKAQEERRAAEKERRRAEGRAQELEVRLEGLEELISTLKDVKGAHKVME
WHKRMEEARLQELRKGRELVVQKEEISYLKKLVEEQDRTVRSLEEDIVQLNSLQEERQLA
WDQREVELERQLDRYEKQHTEILNSAEKVKEEERPLPDPALPLAHQLEFALGKIKEQVRT
ILELQGTCKSLDKKLKESEVALLKAEQNIVSRDKVINELRLRLPAAADREHLLADLRKNE
EDQPSSQASLKLAHQTIKDLQSRLDKKEDVLKKYQNQMAQARQDQEEMIKRHQEELRILH
QKLDLHTDTSLDQFKQTAMELMKKPAIRVPTPKHLERLAELEQTVAEQDASLSSVTEKLK
LTAAELEQHRIAMEMQAKKHAEEMAKLEENYVAQVKALSGEVEDRSSQLAQMEKEMSFLR
SELEAQKEANVRSPSNTMKNLVERLKAQLTQKEKQLKALSKALLELRAEMTSAAEQQVIA
NAAQKEQSLNVQVLVDKHTKDLKTRVQELNEELQAAKDSAKAARSRENVLKEEVEGLNQD
FQRYQRTQRRLQAEKAEREQEVVELKQQVKRLTSTMQNQTEADGKGAIIENLQKKIRRLE
SDLEKRNDVKNTKDDHGKTKDEIVRWEESKRWQARMEKVKNSLKEKERDNESLSKQLATL
KDLYGRLEQEKAALQKKLKARGVTADQVVGVRANDMERQIEELKKKNSELETQIVTIKQQ
QALPRDDAMENLMSKNQLLEERLHSLERQISKEPPSRPSTSGRGTGTPSQRDQDISKENL
KLASENLELRLQLEQANQDLPRLKNQIADLREMCTALKQERAEAEKKLAHLRGAGYSGKT
VPELEKTIGLMKKVVERVQRENEALKKSSSRAEQDRVAALEKENEKLKADYEKLKHRSEA
ELSAKLESKTKGLERIVVENERLRREIKREVEAAEKLRVSRTSLEASNEKLESELEETRQ
RLRAALSKAAAVGPEGKASRATVIVCSTCRMFENKMKELEEQLSQKTSSVSELKQQLKEA
KGREEWAETRARQLQDQVDLLQKFPAAPKTNVGSSKDLQAVRLESAEPERTTVEPKQKLN
DDPEQDAGVSPEPGHGNLKRLLQAAESQKSKLQAEVRKLRKELGNFDPNFFEELEDLKYN
YNLEVKKNILLEEQLRKVCDQFGVTPEMPSVSIS
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgtctggtctcatatgggataaagtgttgaaaattgatccaaagactcttgat
gaatgtgaaaaagacgaactggatgaagtcttccacatttttgttgcgacaaaagaatgg
gaggtgaaggataaagccaaggagaacattatccgtgtcctccaagtgggtcaggccctg
ctaaagatgaaagagcgcgaggttaagctccatgaaagcttcatcgacgatatcggtgta
cagcacgtcaaaaccgaaaatgaacttcgtacaaaagtgtccaggctggaacaagagcgc
aagcagctcggcactgggccagatagccgctttcttagggatgagattcggcagctcgag
gcccagctggagcaacgggagaaggaattgacccagttaagcaaagacatgggcaaggag
aagaaaaccaatgaagagctgattgtgcgactggaggaggctgaggacgaagtgaaaaag
ttaaaaagagagaacgagcagttccagcaggacgtggagttctaccgtggagagctggag
cagaaggagccgctcacctccagagacgacggcgctgagattcagaggaagctcagcctg
gccaaccgacagctctatcagtgcctggacgacctgcagcgagcagaggatgaaaacgca
cacctgaagacacagaacgtgcagctgcagagaagcctggaggagtctgtgaaagagatg
gagaagatgacagatgagtacaacaagatgaagatcgttgtgcagcagactgactcaatt
atggaccagctcaggaaagaaagggatcacacgaagcttcaagttagagagctgacagaa
aagattcaaagcatgactgaagagaatgacccaatcatggcagctgtcaatgccaaagta
gaggagtggaagaaagtgctgtctgggaaggatgaagaaatcttggtgtaccagcaaatg
atccgtgagctgagggaaaagctgcgctctgcccagctggacttggacaaaagcaacata
attgccctgcagcaggccatccaggagcgagataatcagatcaagacgctgagcgagcag
gtggagcagtatacaggagagatggaaaagcacgctcagctcatagaggagctgaagatg
tcttcaaacaaagacagaggtgctccttcgacgttacagcagaagaagatggaggagctg
cagtccaaattgaaagtcgcggaggccagagcgatggaagcagagcgggccttcagacag
gcagaatcgcatgctgaggaaaaagacaaagcctttattgaggcgtcaaatcgcctgagc
cagtacgagtctggcacttacggcctggaagcagccattgccgagatcaaagagtgtaac
aatcaaattagaatgagagatcgtgaggcagaggccatgaccaaagagatcaaccagctc
gagctgagaatcaatgacctcatggatgaaaacgaggagttccgggaaaaactaggtctg
gagccgaagcaggaagtggatctgacagaattcaggcgcgccagggatctcaggcagcgc
cagtacaaagcagaaaaccaggttcttgccaaagagattgagcgactggaagaagagcgg
ctggagttgaagaaacaaatcaggcgcatggtgaaagaaaaagctgtgcctactggaatc
ccacagtcaagtgtgcagctggaggaagatgtctggtccagcagaaaagaagaggcacaa
ggaagaatttacactgacgacgagatcagacgaaagaatgaatacctagagaaagaactg
agcagcaagaagagggaactggaacttcacaagtccgattttcaggctcaactggcagac
ctgtccaaagcaaagcgagacttggaggctaccctgaaagatgttcttcaggccatgagg
actagtcaacagaccggttctgattctgtcactgctagcagtatgaaaagcttgtctaat
gctttagatgtgagcagcctaggtgggcaactcgagactggcctcaactctcaaatccat
cggctggtgggccgaaacgaagagctgaggcaggaactgaaattggctcgcgaggaggcg
agcagcagcttcagtgacttcatcagagccaaagagaaggtgagccatctccaaaatgag
ctggagctgctcaggaagtcaggcggaggtggagtcctccctcgacctctgacccttccc
gaaggcctgggccccagcagcactgaggtcattagctccttgaacgagtacgctgttcga
ctgcttcaggagctgaaaaacagggaggaaaaaggcaagaaacttttagaaaccctggaa
gaatacaaagagaagttttctgtcataagccatcaacaaggactcctctataaggaatat
ttaagtgaaaaggcagagtggcaacaagagaaggagactttcacagacacgaagaacaag
ctggatgagcaaaagcaggtggacgatgtgaaaattcaacagttcaacgagctgctggac
acacttcacagagaccccgaggaaatcaggaggcagctgagcgaggcgttccgcaagcta
accgtgctgagggtcaacgagaagaaactgtcgcgccgctactccactctgctggaacgg
gagcagctcctccgcaaggaaaacggcaagctgagggacgagagcagccgcatgcaggcc
tctgtcctccagaggatgggctacctgcagaggtacaaggaaatggctgcctataagata
acagccctgcagaagaccttggatggcagcgtgcctgcatcagaacttgagagagccaat
aagcagtacaccgagctaacagtcaaatacagagatgtgctccagaaggacagcctactt
gtgcagaaaacatccagcctccaacatttagagagcgagaacgagtctctacgggaacaa
atctctgccgtcaagaaggagctggagatcacgaaagagaaactcaacacgttggagcaa
gcatgggagaccgtcggttcagtcggctctgaaactgtcctagctgagggagacagggca
tcgatcaacagcgaggcgatatccgctgcgaggcggatcacagctttagagatgaaggag
ctgaacgagaggcagagggccgagcatgcccacagaatgtacgaacacatgaggaactcc
ctgagacaagtggaggagcgcaacacggagctggaatccaagttctcagagctgaccaag
atgaatgcggaggcccagcgggtcgagcgggagcttagagatatgctggtggacaccagc
agcaaagccgccagcgacgccgacaaggccaggatcacagagctggagaaggccgaggcc
gagctgcgcctcgaggtctccaagctgcaagaagtctcagacgtggctttgtctcaggtc
tccgctctgcaggcccgacacaagtccaaagacatcgaagtcgaggctttaaggagacaa
atactggattaccagtctcagtcggatgagaaggctctgattgcaaagctccaccaacac
atggtggcgctgcagctcagtgagtcggcggctctggggaagctggaggccgccgcctct
cacatacagcggctggaggccaacatgctgcgtgccgagcagcggctggacgccagcgag
cgagcgctcttcctcgcccgccaggagggccgccaccgcgccacacacctccgccagacc
gtccaggcgctccgcaggcagttcgccggggcgctgcccctccggcagcaggagaagttc
tctctggccatgctgaagctccaggaggaccgagccaaagcccaggaggagagaagggca
gctgagaaggagaggcggagggcagagggaagagctcaggagctggaggtgagactggaa
ggcctggaggagctcatctctactctgaaggacgtgaagggcgcccacaaggtaatggag
tggcacaagaggatggaggaggcccgcctccaggagctgaggaaagggagggagctggtg
gtccagaaggaggagatcagctacctgaagaagctggtggaggagcaggaccgcacagtc
cgctcgctggaggaggacattgtccagctcaactctcttcaggaagagcgtcagctggcg
tgggaccagcgggaggtggagctggagcgccagctggaccgctatgagaagcagcacacc
gagattctcaacagcgctgagaaggttaaggaagaggaaaggccgctcccagacccagcg
ctgcctctggctcatcagttagagtttgctttgggtaaaatcaaagagcaggttcgcacc
atcttggagcttcagggaacatgcaaaagtttggacaagaaactgaaagagagcgaagtg
gctctgttgaaagcagagcagaacattgtgtcgagggacaaggtgatcaacgagctgcgt
ctccggctcccggcggccgccgaccgcgagcatctgcttgctgacctcagaaagaacgaa
gaggaccagccgagcagtcaggcttccctcaagctggcgcaccagaccatcaaagatctc
caaagtcgactcgacaagaaggaggatgtgctgaagaaataccaaaaccagatggctcag
gccagacaggatcaagaggagatgataaaaagacatcaggaagagttgagaatattacat
cagaagctggacttgcacacagacacctctctggatcagttcaaacagacagcaatggag
ttgatgaagaagcccgctatcagagtgccaacacctaaacacctggagcgcctggctgag
ttggagcagacggtggctgagcaggatgcgtcactcagctctgtcacagagaagctgaag
ctgaccgcagccgagctggagcagcaccggatcgccatggagatgcaggctaagaaacat
gctgaggagatggcaaagctggaggagaactacgttgcccaggtgaaggctctgagcggt
gaggtggaggacaggagcagccagctggctcagatggagaaggagatgagcttcctgcgc
tcagagctggaagcacagaaggaggccaatgttcgctccccgagcaacaccatgaaaaac
ctggtggaacgcctcaaagcacaactcactcagaaggagaaacagctcaaggctctcagc
aaggctctgttggagctgcgggccgagatgacgtcagctgcagagcagcaagtcatagct
aacgctgcccagaaagagcagagtctcaatgttcaggtgctggtggacaaacacaccaaa
gacctgaagacacgggtacaggaactgaacgaagaacttcaagctgcgaaggattcggcc
aaagcagccaggagcagagagaacgttctgaaagaggaggtcgaaggactaaaccaagac
ttccagagatatcaaagaactcagagacgactgcaggccgaaaaagcagagagagagcaa
gaagtggtggagctcaagcagcaagtaaagaggctcaccagcaccatgcagaatcagaca
gaggcagatgggaaaggagccatcatagagaatctgcagaagaagatcaggaggctggag
tcagacctggagaaacggaacgacgtaaaaaacaccaaagatgatcatgggaagaccaaa
gatgaaattgttcggtgggaggagagcaaaagatggcaggctagaatggaaaaagtgaag
aattccctgaaggagaaggaacgagataacgaatcgttgtcgaagcaactcgccactctt
aaagatctttatggcagattggagcaggagaaggctgcgctgcagaaaaagctgaaagct
cgaggtgtgaccgccgaccaggtggtgggggtacgagccaatgacatggaaaggcagata
gaggagttgaagaagaagaattctgagctggaaacccagattgtaaccataaaacagcag
caggccttgcctcgtgatgatgccatggagaaccttatgtcaaagaaccaacttctagag
gagagactccactccttagagaggcagatatccaaggaacccccttctagaccctcgact
tcgggacgcgggaccgggactccatcacagagagatcaggacatctcaaaggaaaacctc
aagctggcctcagagaacttggagctgcgcctccaactggagcaggccaaccaagactta
cccaggctgaagaatcagattgcagacctaagggagatgtgtacggctctgaaacaggag
agagcggaggccgagaagaagctggcacacctacggggagctggttacagcggcaaaacg
gtccctgagctggagaagaccattggtctgatgaagaaggtggtggagagggtgcagagg
gagaacgaggcgctgaagaaatccagcagccgtgcagagcaagacagagttgccgctttg
gagaaggaaaatgaaaagttgaaggctgactatgagaagctgaaacatcgaagcgaagct
gagctgagcgcaaaactggaatccaaaaccaaaggactggagaggatcgtggtggaaaac
gagcgcctccgcagagagatcaaaagggaagtggaggcggcggagaagctgagagtgagc
aggacgagtctggaggcgtccaatgagaagctggagtctgagctggaggaaaccaggcag
aggctgcgagcagctctgtccaaagctgccgctgtggggcccgaaggcaaagcttccagg
gccactgtcatcgtgtgttcaacttgcaggatgtttgagaacaagatgaaggagttggag
gagcagctctcccagaagacctccagcgtgtcggagctcaagcagcagctcaaagaggcc
aaggggcgcgaggagtgggccgagacgcgggcaaggcagctccaagatcaggttgacttg
ttacaaaagtttccagcagctccaaagactaatgtggggagctccaaggatcttcaagca
gtcagactggagagcgccgagccagagaggacaaccgtggagccgaaacagaagctgaat
gacgacccggagcaggatgctggagtttctccagaacctggacatgggaacctgaaaaga
ctcctacaagctgccgaaagccagaaatctaaactccaagcagaggtgagaaagctaagg
aaggagctggggaacttcgacccgaactttttcgaagagctggaggatttgaaatacaac
tacaacctggaggtgaagaagaacatcctgctggaggagcagctgaggaaggtgtgcgat
cagtttggcgtgacgcctgaaatgcccagcgtgtccatcagttaa
DBGET
integrated database retrieval system
