Xiphophorus hellerii (green swordtail): 116710566
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Entry
116710566 CDS
T07363
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116710566
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
116710566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARMC9_ARM
Atx10homo_assoc
HEAT_EZ
HEAT
IL4
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
116710566
NCBI-ProteinID:
XP_032405589
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All DBs
Position
20:6201538..6212024
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AA seq
732 aa
AA seq
DB search
MSSADPLKSAISIRSSDDTSLALPSANEYHSREQRVKAQVQSLRRTKSRHSSSGRSGSTS
LSPTSPEYDSVFLDGAKSQLSSSNGGDFLSNGSSKVFTTNRNMNNQHMISNMKRSTVRKQ
TINHYDSRYGAVGGVASLGLANTSRSEPGLALNSSVPLPSVPMQIQPTIQQRSNRNTYMK
HRSNSNHYIKRTISQTQPLYALNGSGLMHKQSQYGVSQPEMNKAQSQHTVTDSSSKNQMN
SEVNGNSLSSNITMQEAVQFLSSQDEKYQHCGASYIQHNTFISDKAREEVFTLNGIPPLM
RLLQSPNSQVKSTASAALRNLTFQNNKNKEEIQRCDGIPEVVAQLKASESAELDKQLTGL
LWNLSSVDNLKSDLLKNALPVLMERVILPYTSGSRDTVSAEVFCHATACLRNLSSAKEAS
RQTMRKCRGLIDGLVAYMKECVANSKTEDETLGHCVSILHNLTFHLEEEFSSLFINMNSL
AKNMISNVSQNNANSVGCFSAPSKPLQTDRPFDYAVIEDPQPNGAGLLIHSKTLKDYLSL
LRLTERQPLQDACWGILHNLTARESAVSYVISQIIVKKLNGMHYISPFLKSDKVNMQKNA
MGLVVNLIKNPTLCSVVGEKAIPDLLSVLSKDTAGANESDDTLALACQAASGLVLNDVEW
TKRHLSEKLIKSLNGISQNIYFSKSSKAASVLLIRMWSNKELQSSLKKLGFSKSMFINDT
TMAVQKSLHVVD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtgcggatcctctgaaatcggcgatttccatcaggagctcggacgacacgtcg
ctggctctgccgtcggcgaatgagtatcattcccgggagcagcgcgtcaaggcgcaagtg
caatctctgaggaggacgaagtcaaggcactccagcagcggcaggagcggatctacttct
ctttccccaacaagccccgagtacgactctgtgtttttagatggcgcaaagtctcagttg
agttcatctaatggaggcgattttttgagcaatggctcctcaaaagtttttaccacaaac
agaaatatgaataaccaacacatgatcagtaacatgaaaagatccactgtaaggaagcag
actataaatcactatgatagcaggtatggcgctgttggcggtgtagccagtctgggtctt
gctaacaccagtcgcagcgagcccgggctggccttgaacagcagcgtcccactgccgtcc
gtcccaatgcagatacaaccaaccatacaacagcggagcaacaggaacacctacatgaaa
caccgcagcaacagcaatcactatataaagaggaccatctcccaaacccagcctctgtat
gctttaaatggatcgggtctgatgcacaaacaaagccagtacggagtcagtcaacctgaa
atgaacaaggcgcagtcgcaacacaccgtcactgattcttcatccaagaatcaaatgaac
tcagaagtaaatggaaacagtttgagttctaacatcactatgcaagaagctgtacagttt
ctttccagccaagatgagaaataccaacactgtggtgcttcctacattcagcacaacact
ttcattagcgacaaagcaagagaagaggtttttaccttgaatggtatcccgcccctcatg
cgtttgctgcaaagccccaactcacaggtcaaaagcacggcctctgccgccctgcgaaat
ctgacctttcagaacaacaaaaacaaagaagagatccaacgctgcgacggcatacccgag
gtggttgctcagctcaaagcctcagaatctgcagaactggacaaacagctgacaggtctt
ttgtggaatttgtcgtctgtagacaacctgaagtcagacctgctgaagaatgctctgcct
gttctaatggagcgtgtgattctgccttacacgtcaggctctagagatactgtcagtgct
gaggtcttctgccacgccacagcatgccttcgaaacctcagcagtgcaaaggaggccagc
agacagacgatgaggaaatgtcgaggtttgatcgatggcttagtcgcttacatgaaagaa
tgtgtggcaaactctaaaacagaagatgagactttaggacactgtgtgagcattctgcac
aatctgacatttcacctggaagaagaattttcaagtctgttcatcaacatgaattctttg
gcgaagaatatgatcagtaacgtcagtcaaaataacgccaactctgttggttgcttcagt
gcaccaagcaaacccctacaaactgatcgtcccttcgactatgcagtcattgaggatccg
cagcctaatggagcaggccttttgatccactccaaaacgctgaaggattacttgtctctg
cttcgcttgaccgagcgccaaccgctgcaggatgcctgctggggcatactgcacaatctc
actgcgcgtgaaagcgctgtctcttatgtaataagtcagatcattgtgaagaaactgaat
ggcatgcattatatcagccccttcttaaagtcagataaagtcaacatgcagaagaacgca
atgggtttggtggtaaatttgatcaagaacccaactctgtgcagtgtcgttggtgaaaaa
gccatcccagacctactaagtgtcctctcaaaggacacggctggagccaacgagtccgat
gacactcttgctttggcctgccaggctgccagtggcctggttctgaatgacgttgaatgg
accaaaagacatttaagcgaaaaactgattaaatccctgaacggcatcagccaaaacatt
tatttttccaaatcgagcaaagctgcttcagttcttctcatcagaatgtggtctaataaa
gaacttcagagctctttgaaaaagcttgggttcagcaagtctatgtttatcaatgacacc
accatggcagtacaaaaatctctccacgttgtggattaa
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