Xiphophorus hellerii (green swordtail): 116711254
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Entry
116711254 CDS
T07363
Symbol
spdef
Name
(RefSeq) SAM pointed domain-containing Ets transcription factor
KO
K09442
SAM pointed domain-containing ETS transcription factor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116711254 (spdef)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
116711254 (spdef)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
116711254
NCBI-ProteinID:
XP_032406552
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Position
20:complement(6689455..6698528)
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AA seq
333 aa
AA seq
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MSNPVSGLPESSGFVSRIGMTEDSLVFRERNRCSEDPWDTVDIKPNIEALERGAGLYLSC
YDMLLTEDAAWVVKVSEGSTALAVPMNRMESREEPEQCPVIDSQEHGLSPGLEGQMEDRS
LEQVQSMVVGEVLKDIETACKLLNITPDPTEWNTGNVQKWMLWTEHLYRLPHAGKAFQEV
TGKDLCAMSEEEFRQRSPLCGDTLYAHLDIWKSAAWMKERCSAVDTKATGCEELWSEADS
SCSGQPIHLWQFLRELLLKPHNYGRCIRWLNKEKGIFKIEDSAHVARLWGLRKNRPAMNY
DKLSRSIRQYYKKGIIRKPDVSQRLVYQFVHPV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatccagtgagcggcttaccagagagctctggctttgtgtcccggattgggatg
acagaggattcactcgtcttccgcgagcgaaacagatgctctgaagacccctgggacaca
gttgacatcaaacccaacatagaagctctggagcgtggagcgggcctctatctgtcctgc
tacgacatgctcctcactgaagatgccgcctgggtggtgaaagtatcagaggggtccact
gcactagcagtacccatgaatcgcatggagagccgagaggagccagagcagtgccctgtc
attgatagccaggagcatggactctcccctgggcttgagggtcagatggaggatcgttct
ctggagcaggtgcagagcatggtcgtaggggaggtgctgaaggacattgaaacagcctgc
aaactgctcaacatcaccccagaccctacagagtggaacacggggaatgtccaaaagtgg
atgctgtggactgaacacctgtacaggttgccccatgcaggaaaggccttccaggaggtg
acagggaaggatctgtgtgccatgagcgaagaggagtttcggcagcgctccccactgtgc
ggagacacgctgtacgctcacctggatatatggaagtcagctgcctggatgaaagagagg
tgctcagctgtagataccaaagctacaggctgtgaggagctttggtccgaggcggattca
tcctgttcgggtcaaccgattcatctgtggcagttcctccgagagctgctgctcaaacct
cacaactatggtcgctgcatacgctggctcaataaagaaaaaggtatttttaaaatcgaa
gactcggctcatgtggcgcgactgtggggactcaggaagaacagacctgctatgaattat
gacaagctgagccgctccattcggcagtactacaaaaagggaatcattcgcaagcctgac
gtgtctcagagactggtctaccagtttgttcacccagtatga
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