Xiphophorus hellerii (green swordtail): 116711641
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Entry
116711641 CDS
T07363
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116711641 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116711641 (nr1h4)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116711641 (nr1h4)
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
116711641 (nr1h4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PBP_dimer
Motif
Other DBs
NCBI-GeneID:
116711641
NCBI-ProteinID:
XP_032406929
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Position
2:14199505..14215530
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AA seq
485 aa
AA seq
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MNEWEGPEINVVGPLQIPSSDEFSISESAHFFDILADQGSPLLQDPDILPFTTYPSMQYP
SLEPNMSATPYYSSQNYYPPFSGDEWYSHMGLYELRKGPLEGSYGTEMDEASSVVPAVCK
RNRHLNQPGRIKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKTSPGRSTGDETEGVDSA
DNKQVTSTTKLSKEKVAITKEQDALLKLIVEAYNKHQIPQDVTKKLLQEQYSTEENFLLL
TEIATSQVQVLVEFTKNIPGFLSLDHEDQIALLKGSAVEAMFLRSAQVFSRKMPKGHTVV
LEERIRKSGISEEFITPLFNFYKSVGELHMVLEEQALLTAITILTPDRPYVKDQQAVERL
QEPMVELLKKLCVLQHPQEPQYFARLLGRLTELRTLNHYHAEMLTSWRVNDHKFTPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggagggccccgagatcaatgtggtgggaccactgcaaatcccatccagc
gatgagttctccatctctgagagcgcccacttcttcgacatactggcagatcaaggcagt
cctcttctgcaggaccctgacatcctaccattcaccacttaccccagtatgcagtatcca
tccctggagccaaacatgtccgccactccatactactcctctcagaactattaccctcca
ttcagtggagacgaatggtactcacacatgggcttatacgaactgaggaaaggacccctg
gagggcagctatgggactgaaatggacgaggcctcttctgttgtgccggctgtttgcaag
aggaaccggcacctgaatcaacctggaaggatcaagggggaggaactgtgtgtggtctgc
ggagacaaggcctctggataccactacaacgctctcacctgtgaaggatgtaaaggcttc
ttcagacgaagcataacaaagaacgccgtgtacaaatgcaagagtggcggcaactgtgag
atggacatgtacatgcgcaggaaatgccaggagtgcaggctgagaaaatgcaaggagatg
ggcatgctggcagagtgtctgctgacagagatccagtgtaaatccaaaaggcttcgcaag
aacaccaagacctccccggggcggtcaacaggagacgagacagagggggtggacagtgcg
gacaacaagcaggtcacctcaaccaccaagctgtcaaaggaaaaggtggcaattactaaa
gagcaagatgcactcttgaagctcatagtggaagcttacaacaaacatcaaatcccccag
gacgttaccaaaaagctgctacaagaacagtacagcacagaggaaaactttctcctcttg
accgaaatcgcaacaagtcaagttcaggttttggtggagtttacaaagaatattccagga
tttctgtctctggatcatgaagatcagatcgctctgctgaagggttcagctgtggaggcc
atgtttctgcgttcagctcaagttttcagcaggaagatgccaaaaggacacactgtggtt
ttagaagagaggatacggaaaagtggtatatcagaagaattcatcacgcccttgtttaat
ttttacaaaagtgttggtgagctgcacatggtgctggaggaacaggctctcctcactgca
ataaccatcctgacaccagaccggccttatgtgaaggaccagcaggctgtggagcggctg
caggagccaatggtggagctgctgaagaagctgtgtgttttgcagcatccgcaggagccg
cagtactttgctcgccttctgggccgcctgacggagctgaggacgctcaaccactatcat
gcagagatgctcacatcatggagagtgaacgaccacaaattcaccccgctgctctgtgag
atctgggatgtgcagtga
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