Xiphophorus hellerii (green swordtail): 116713108
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Entry
116713108 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: protein FAM83H-like
KO
K23931
protein FAM83H
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116713108
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
116713108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SACK1
PLDc_2
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
116713108
NCBI-ProteinID:
XP_032408966
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All DBs
Position
22:3088264..3098473
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AA seq
1757 aa
AA seq
DB search
MARRSQCSSAGDNPLDPNYLPPHYREEYRLAVDALVEDSLNGYYQCLQNVDVVDFLSPAE
IQYIQSVVQPPKQSILSEQQFLDSEGEGSSDTYWPIHSDLDVPGLDLGWPQMHHFIEPTE
VTTLVNPPEPDMPSIKEQARRLIKNAQQVIAIVMDMFTDVDIFADILNAAGRRVAVYILL
DEQNADLFVNMVANCRVNLQAFPFLRLRTVSGITYQCRSGKSFKGQMMDRFLLTDCRAVL
SGNYSFMWSFEKLHRCMAHLFLGQLVTTFDEEFRILFAQSQPLNVENMLAQMEDLKVLQK
REFPNESTSLYREPKRFLTLDIPSDDWGGHPYDDQLDGNLRIMALKRQGSLRGPADMYNR
FGSQQSHMDPGFDQGPSRHLMTDNPALKRHSYTEDVPGRYSFPLMPQQGMPDSEPRGKPF
HRGQQPFPGPGPGPEEDYSSYDKFWNQGYLPEQYPVPALQQEVPPEFDPVLNYLSSTRNL
DVDQGTDKLQPPVDFSFTSPQPKRLGVGQPYACQTSPTPSNSADQKPFFHDLTLNRKDPT
VKQKLRNWRIGSYLSTYDNPEEEGLPMVPTQPTDTFEEPLNPIQQTAQLPGLPASKIPNV
KEFKVTTVPRVSQMPGFAKAVTQEKLKKVLDDPVPVVIETKTTPASSETSYTAEERKTEE
EDQKQPVSTGLQRDDSFKRKYNPGGLITSRLRSSLIFSSLEQQTPQETTTADQDDEGGDK
TKTEQAKLPLVSQVLGQRRSTAREPFEWSRYIKSTLETLRPADVSKKEEDKDTSRGKHSQ
DLADTLEAKEAIKPTDVEQDNVSLLMPQVKLPKLKAPKTDQPVQPTEPLLTDVDMNDPDK
RLMFFKELAAKRKAAKATESQKEKEKAELKPQSEVKTMSICQKEESLPKRTPETSVAKDS
VKKPSENISNKDSNIPKPSTELQVQPKKTELDSQSVAGLSVSAETGDPPSKPLEYPTLPN
PFVKESLSALIPQSKPTSVELPKTDQPVKMPNPLFTSPYIDMSDPDNRLMFFKELAAKRK
ASQAKKGEEEAPIKPQADLQNTSVSPKEEDPPKGTPESMEPSVPKGSSENSTTLSTETSN
SESSPSLKSPSLKHDENTRKQDSLVKNDPSTLSTSGEQAQEVSAESAKTDSERLSAEETE
ASQSKSSENPTVSELSVQKNSPKQANVAHTAVSCHGEGADNGEPPTLECISIIPSLEEAS
SSTTPQNTESVQLETSICSPPLPSEAETTTEIGSVQISTSDTPPLESGLNNHPATTEETS
FSDSAQEVYSSANVSSKTSSNIDDIKAQEPVSSSQQEPSNENLQTSDQTHLNAVSQXASS
ENTSVADAANTDAVVSPDKTTADLEPDNLNATTETNRKESFAGTPLVEGVEKNVTELGQE
ESVAKECEALISPEDAEAQSTSPAVCPSVPDSTLPSESGHEGSVAEPDLEKTVSSVTDPV
DTQLADVPTETGSLENTESPKASLLEKSELPQEVAIQTAPSSNLKLTDLNTPSAPETLSS
SSTSESVQSGLDPEAKVSVTSVSTEQNFSDTNSISNDTQPKSEESLLQPTAQSLSSPSET
TTAAPAEADLPCKISETVTPQSQTPEPAAPQESSKKEAELGETDEKKSNNLEDKDKSQQP
STEDPASREKMKDQSKQSNCSETSEVTSKQPKSSQSRYHSSTVNVITSSNLRDDTKLLLE
QISAQSQSRNEATKESPVTDDEKEDKADKKIKNEKELGYRSYNRGQTKSTQEKEKLLERI
QSMRKERKVYSRFEMAP
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgccgctctcagtgttcctccgctggggataaccccctggaccccaattacctc
cctccccactaccgggaggagtaccgcctggctgtcgatgccctggtggaggacagcttg
aacggatactatcagtgcctccaaaacgtggacgtggtggacttcctgtccccggctgag
atccagtacatccagagcgtcgttcagcctccgaagcagagcatcctctctgagcagcag
ttcctggacagcgagggagaaggctcctcggacacctactggcccattcactccgacctg
gacgtccccggtctggacctcggctggcctcagatgcatcacttcattgagcccacagag
gtcacgaccctggttaaccccccggagccggacatgccgagcatcaaggagcaggcccgg
cggctgatcaagaacgcccagcaggtcatcgctatagtgatggacatgtttactgatgtc
gacatatttgcggatattctcaacgccgctgggaggagagttgctgtctacatcctgctg
gatgagcagaatgctgatctctttgttaacatggtggccaactgcagagtcaatctgcag
gcattcccattcctacgcttgagaacagtatctggaataacatatcagtgccgctctggg
aaatccttcaaaggccagatgatggatcgcttcctgctaaccgactgcagagctgtgctg
agtggaaattacagcttcatgtggtcttttgagaagctgcaccgctgcatggcccacctc
ttccttggacagctggtgaccaccttcgacgaggagttccggattctcttcgctcagtcg
cagccgctgaatgttgagaacatgcttgctcagatggaggatttaaaagttttacaaaag
agagaatttcccaacgaaagcacttcactgtacagagagcctaaaagattcctgactctg
gacattccttctgatgactggggaggacatccgtatgatgatcaactcgatgggaatttg
aggattatggctctaaagaggcaggggtctcttcgcggccctgcagatatgtataatagg
tttggttcccaacagtcgcacatggaccccggttttgaccagggtccttcacggcatttg
atgacagataatcctgccttaaagcgtcactcttatactgaagatgttcctggcagatac
tcattcccattaatgccacaacagggaatgccagactctgaaccaaggggaaaacctttt
cataggggccagcagccttttcctggaccaggaccaggaccagaagaagactacagcagc
tatgataagttctggaaccaaggctatctgcctgaacagtaccctgtaccagctttacaa
caggaagtaccaccagaatttgatcctgttcttaactatttatcatccaccagaaatcta
gatgttgatcaaggcacagataaactacaaccaccagtggatttttcatttacttcccct
caacccaaaagactgggagtagggcagccatatgcctgtcaaacctctccaacgccttcc
aactctgccgatcagaagccttttttccatgaccttactttgaaccgcaaggatcccact
gtgaaacagaagctgagaaattggagaattggctcataccttagtacatatgataatcca
gaggaagaaggcctgccaatggtgccaactcagccgacagacacttttgaggaacctctg
aatcccatccaacaaacggcccagctaccaggtctaccagcttctaaaatacccaatgtc
aaagagtttaaggttaccactgtacctagagtcagccaaatgccgggctttgccaaagca
gtcacacaagagaaattgaagaaagttctggatgaccctgttccagtggtgatagaaacc
aaaaccacaccagcatcctctgaaacctcctacacagctgaagagagaaaaactgaggag
gaggaccaaaaacagccagttagcacagggcttcaaagggatgactctttcaagagaaaa
tacaatccaggggggctaataacctccagattaaggtcttccctgattttcagctccctg
gagcaacagacccctcaagaaactactactgcagaccaagacgatgagggaggtgacaaa
accaaaaccgaacaggccaaacttccccttgtttcacaggttttggggcaaaggagatct
actgcaagagaacctttcgagtggagtcgttacataaaatccactttggaaacactgaga
cccgctgatgtaagcaaaaaagaggaggataaagacacatcaagggggaaacattcccaa
gaccttgcagataccctggaggcaaaggaggccataaaaccaacagatgtagagcaagat
aatgtttcactattgatgcctcaagtcaagctccctaaactaaaggcacccaaaactgat
caaccggtacaaccgactgaacctctgctcactgatgtagatatgaatgatccagataag
aggctcatgtttttcaaagagctggcagcaaaacgtaaagctgctaaagctacagaatct
caaaaggaaaaagaaaaggcagagttaaaaccgcagtcagaggtcaaaaccatgtcaatt
tgccagaaggaagagtctcttccaaaaagaactcctgaaacttcagttgctaaagattca
gtaaaaaagcctagtgaaaatatcagcaacaaggactccaatatcccaaaaccttctact
gaactacaagtccagcctaagaaaactgagctggacagccagtcagtagctggcctttct
gtttctgcagaaacaggtgaccctccaagtaaacctctagaatatccaactctgccaaat
ccttttgttaaagaaagtttgtcagcattgattcctcaatctaagccaacatcagttgaa
ctgcctaaaaccgatcaaccggtaaaaatgcccaatcctttgttcacatctccatatata
gatatgagcgatcctgataataggctcatgttctttaaagagttggcagcgaaacgaaaa
gcttcacaagctaaaaagggagaagaggaggccccaataaaaccacaggcagatctccag
aacacgtcagtgtccccgaaggaagaggatcctccaaaaggaacaccagaaagcatggaa
ccttctgtaccaaagggttcatcagaaaatagcactacattgtccacagagacatcaaac
tcagagtcatcaccctctttaaagtcaccctctttgaagcatgatgaaaataccaggaag
caggatagtcttgtcaaaaatgatcccagtaccctcagtacttctggagaacaagcgcaa
gaagtttctgctgaatcggcgaaaacagactcagaaaggctttctgctgaagaaaccgaa
gcaagtcagagcaaatcatcagaaaacccaactgtatcagaactttctgtccaaaagaac
tcacccaagcaagcaaatgttgctcacactgccgtttcatgccatggtgaaggcgctgac
aacggagaacctcctactttagaatgtatttcaataattcctagtttagaggaagcttca
tcatctactactccccaaaacactgaatctgttcagttagaaaccagtatttgctctcct
cctcttccctcagaagcagaaactacaacagaaataggctcagtgcaaatctctacctct
gatactcctccacttgaatcaggtttgaataaccaccctgccacgacagaagagacctca
ttttctgattctgcccaagaagtgtacagctctgcgaatgttagtagcaagacatcatca
aatattgatgacattaaagctcaggaacctgttagctcctcacagcaagagccctccaat
gaaaatttacaaacctctgatcaaactcatctaaatgctgtttcccaantcgcttcatct
gagaacacctcagtcgctgatgctgcaaatacagatgctgttgtttctccagacaaaact
actgctgatctggagccagacaatttaaatgccaccacagagacaaacaggaaagaatct
tttgctggtacacctttagttgaaggtgtagagaaaaatgttactgaattagggcaagag
gagtcagttgcaaaagagtgtgaagcccttatatcacctgaagatgctgaagctcaaagc
acatctcctgctgtttgtccatctgtacctgattccactttgcctagtgaatctggtcat
gaaggctcagtcgctgaaccagatttggaaaagacagtttcatctgtcacagatccagtt
gacacccaacttgcagatgtacctacggaaacaggatcacttgaaaacacagagtctcct
aaagcctcactgttggaaaaaagtgaacttcctcaagaagtagcaatacaaactgctccg
tcgtccaacctcaagctaacagacttgaacacaccctcagctcctgaaacattatcatct
tcctcaacgtctgagtcagtccagtcaggtttggaccctgaagctaaggtatcggtaacc
agtgtctctacagagcaaaacttctcagatacaaactcaatatccaatgatactcaacca
aaatcagaggaatctcttcttcagccaacagctcaatcactgagcagcccaagtgaaact
accacggcagccccagctgaagctgatttgccatgcaaaatatctgaaacagtcactcct
caaagccaaacaccagaaccagctgcacctcaggagagtagtaaaaaagaggctgagtta
ggagagacagatgagaaaaagtccaacaatctagaggacaaagataagagccagcaacca
tccactgaggatcctgcaagcagggagaaaatgaaagaccaatcaaagcagagtaactgc
tccgaaacatcagaggtgacatccaagcagcccaaatcgagtcagtctcgctaccactct
tcaacagtgaatgtgatcacaagcagcaacctccgagatgacactaagctgctcctggag
cagatttctgcccaatcccaaagcaggaacgaagcaacaaaagagtcccctgtcacagac
gacgagaaagaagacaaggctgacaaaaagatcaaaaacgaaaaggagttggggtacagg
tcatacaacagggggcaaactaaatcaactcaggagaaggagaagctattggagaggatt
cagagcatgaggaaggagaggaaagtttacagtcgttttgagatggcaccttag
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integrated database retrieval system
