Xiphophorus hellerii (green swordtail): 116713771
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Entry
116713771 CDS
T07363
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116713771 (ret)
04020 Calcium signaling pathway
116713771 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116713771 (ret)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116713771 (ret)
Protein kinases [BR:
xhe01001
]
Receptor tyrosine kinases (RTK)
RET family
116713771 (ret)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
RET_CRD
Cadherin
Cadherin_FAT4_N
Pkinase_fungal
RIO1
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
116713771
NCBI-ProteinID:
XP_032409898
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All DBs
Position
22:3897716..3931003
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AA seq
1118 aa
AA seq
DB search
MEPSCCFSPGNVAALLQLLLLLVGGVAGLYFPQKEYTETVYVGQPAGTPVLQVHAMLDGR
SERPHFYLCGSRRPPYALWFQMDVQTGELSLSKTLEETDFASLYQNSWPAKRLTLQVMAL
NSVSKRTPCSRNSAHITLDFVNGSMPRCAQTDMKELCFPHRDTSNPHIIENRFPGVLRQL
RRLTRLTVCPNYTIAYGVESETPAPFAVNGNTSELVVTAPLDREESENYRLLLVCTVQTE
SVVTKVETPLDVFVDDEDDNAPYVNGTDTAEVVISFNRTKGAAFGTLFVFDRDLTTLFPK
DLSHNRYVGTLLSSESWIKDTFDIKGTFSERRASPGGIRESVYDYQLILKRNLDITENRT
VFLDYLVNDTTYPGLEGTVLLHFNVTILPVQIRFANITHVFTLSRKASIYAQVGRICVEN
CLEFDGFSVSYQLEVPDKNMSSELLSCYSAISITQAPDRMLGLLYVNNSGALSKPGCQDL
DYTVVAQEEQTQLVASTQIRILLHGEANVSQESQQLLSCAENRQRDDCEASQGLGATTGA
CQWRQGSEKGISENYSTCSPDLRTCPDSVCDAVESRDTSICPQDCTTESVTGGHERGLSG
SGIRAGYGTCYCFSEKCFCENADAEAVVSKNRFPDVICDDMCKTIVATALLCCFIISVLL
SSYFIHRYHKNSPKAPIAFAEMTFRRPAQSYPISFPANNVRRGSQESIEADTFKIPEDPK
WEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHTELRDLLSEF
TLLKQVNHPHVIKMYGACSQDGPLYLIVEYAKFGSLRNFLRESRKVGPSYMGRDANRNSS
YLENPDDRALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLS
RDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA
PERLFNLLKTGYRMERPENCSEEMYNLMLRCWKQEPDKRPTFSDISKELEKMMVKSRDYL
DLAASTPADALLYDDALSEEDTPLVDCNNAPLPRALPSTWIENKLYGMSYPSWPETSPVP
LNRHDATNPVFTRYANDSVYANWMALPSPAKAVDKLDS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagttgctgtttctctccgggaaacgtcgctgcgctgctgcagctgctgctg
ctgctggtcggaggagtggcggggttgtacttccctcagaaggaatacactgagacggtg
tacgttggacagccggcggggacgcccgtccttcaggtccacgccatgctggacggccgg
tccgagcggccgcatttctacctgtgcggcagcaggcggccgccgtacgcgctctggttc
cagatggacgtccagaccggagagctgtccctcagcaagacgctggaggagacggacttc
gcctcgctgtatcagaactcctggcccgccaagcggctcactctccaagtcatggctcta
aacagcgtcagcaagcgcacgccgtgctccaggaactcggctcacatcacgctggacttt
gtcaacggttcgatgccgcgctgcgcccagacggacatgaaggaactctgcttcccgcac
agagacacatccaacccgcacatcatagagaacaggttccctggggttctccgccaactc
cggcggctcaccagactcaccgtctgccccaactacaccatcgcctacggcgtggagtca
gagactcctgctccgttcgccgtgaacggaaacacctccgagctggtggtgaccgccccg
ctggaccgggaggaaagcgaaaactacagactgctgctggtttgcacggtccaaacggag
agcgtcgtcaccaaggtggaaactccgctggatgtcttcgtggacgacgaggacgacaac
gcgccgtacgtcaacgggacggacacggcggaggtcgtgatcagttttaatcggactaag
ggcgcagcttttggcaccttgtttgtctttgacagggacttaaccactttgtttcctaaa
gacctgagccacaacaggtacgtggggactttgctgagcagtgagtcctggattaaagac
acgtttgacataaagggaactttcagtgaacgcagagcgtcccctggtggcattcgagag
tcggtttacgattaccagttgatcctgaagaggaacctggacatcacggagaaccggact
gtgtttctggattatttggtgaatgacaccacctatccgggtctggagggaacggtgctg
ctgcacttcaacgtcaccatcttaccggttcagatccgcttcgccaacatcacacacgtc
ttcacgctgtcacgaaaagcttcaatatacgcacaggttggcagaatctgtgtggaaaac
tgcctggagttcgacggcttcagcgtctcttaccagctggaggttccggataaaaacatg
tcgtcagagctgctgtcgtgttattccgctataagtatcacccaggctccagacaggatg
ctgggactgttatatgttaataactccggcgcactgagcaagccaggctgccaggacctg
gactacacggtggtagctcaggaggaacagactcagctggtcgccagcactcagatccgc
attttactgcacggtgaagcaaatgtcagtcaggagagccagcagctgctgtcctgcgca
gagaacagacagagagacgactgtgaggcgtctcaaggcctgggagcaacgactggggcg
tgtcagtggaggcaaggctctgagaaaggaatatctgaaaactattcgacctgctcccct
gacctgcgaacatgtcccgatagcgtttgcgatgcagtggaaagcagagacacttcgatt
tgtccgcaggactgtacgacggaaagtgtaaccggaggccacgaacgaggcctgagtggg
agcggcatcagagccggctatgggacctgctactgcttctctgagaaatgcttctgcgag
aacgcggacgccgaggccgttgtgtcaaaaaacaggttcccagacgtgatatgtgacgac
atgtgtaaaaccatcgttgccaccgctctcctctgctgcttcatcatttccgtcctcctg
tcgtcatactttatccaccggtaccacaagaactcacccaaggctcccatcgcgttcgct
gagatgaccttccgccggccagctcagtcttaccccatcagcttccctgccaacaacgtg
cgaaggggctcacaggaatccatagaggcagacacctttaaaatacctgaggatccaaag
tgggagtttcctcgtaaaaacctggtcctggggaagactttaggcgaaggggagttcggt
aaagtcgtcaaggcaacggcgttcagactgaaaggaaaagccggttacaccactgtggct
gtgaaaatgcttaaagaaaacgcttcacacaccgagctgcgtgacctcctgtccgagttc
accctcctgaagcaagtcaaccacccacacgtcataaagatgtacggcgcgtgcagccag
gacgggccattgtacctcatcgttgagtacgccaaatttgggtcgctccgtaatttcctg
cgtgagagcaggaaagttggtcccagctacatgggcagggatgcaaaccgaaactccagc
tacctggagaaccccgatgacagggcgctgaccatgggagacctcatctccttcgcctgg
cagatttccagaggcatgcagtacctggcagaaatgaagctcgttcacagggatctcgct
gcgcgaaacgtcctcgtcgccgagggacgaaaaatgaagatctccgactttggtctgtcc
cgggacgtttatgaggaggattcgtatgttaagaggagcaagggccgaattcctgtgaag
tggatggcgatagagtctctattcgatcacatttacacaactcaaagcgacgtctggtcc
ttcggtgtgctgctgtgggagatagtgaccctggggggaaacccgtacccaggaatcgct
cctgaacgcctcttcaacctcctcaagaccggctaccggatggagagaccagagaactgc
tctgaggaaatgtataacctcatgctgcggtgctggaagcaggagccggacaagaggccg
acgttctcagatatcagcaaagagctggagaagatgatggtgaagagtcgggactacctg
gacctggcggcgtccacgccggctgacgccctgctgtacgacgacgccctctccgaagag
gacaccccactagtggactgtaataacgcccctctccctcgagccctcccctccacatgg
attgaaaacaagctctatggcatgtcataccccagctggcccgagacgagcccggtacct
ctcaacagacacgatgccactaatccggtctttacaagatatgccaatgatagtgtttat
gcaaactggatggctttgccttcacccgctaaagctgtggacaagctcgatagctaa
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