KEGG   Xiphophorus hellerii (green swordtail): 116714276
Entry
116714276         CDS       T07363                                 
Symbol
nectin2
Name
(RefSeq) nectin-2 isoform X1
  KO
K06531  poliovirus receptor-related protein 2
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03266  Virion - Herpesvirus
xhe04514  Cell adhesion molecule (CAM) interaction
xhe04517  IgSF CAM signaling
xhe04520  Adherens junction
xhe05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    116714276 (nectin2)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    116714276 (nectin2)
   04517 IgSF CAM signaling
    116714276 (nectin2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    116714276 (nectin2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116714276 (nectin2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xhe04515]
    116714276 (nectin2)
   04090 CD molecules [BR:xhe04090]
    116714276 (nectin2)
Cell adhesion molecules [BR:xhe04515]
 Immunoglobulin superfamily
  Nectin family
   116714276 (nectin2)
CD molecules [BR:xhe04090]
 Proteins
  116714276 (nectin2)
SSDB
Motif
Pfam: C2-set_2 V-set ig Ig_3 I-set Ig_2 Ig_PVRIG TM_ErbB1 C2-set_3 ChitinaseA_N Syndecan
Other DBs
NCBI-GeneID: 116714276
NCBI-ProteinID: XP_032410643
LinkDB
Position
3:complement(12308785..12426604)
AA seq 527 aa
MARHDARNVPAKMFGLLFFAASILLRHGTSGQRVKVEPELASYPGQTVNLRCAFPDPTGI
QLTMVTWIYEPKDGERMNIAVFHPNFGPNYPESQMKGRVTFRPSPPELSSPSIEISNVRM
TDEGRYVCEYATYPDGNEQGITQLVMLAKPLNSATAVTVNAGTQPVVVARCESKDGRPAA
KIQWLTTAKGNWTEKSQTGADNTVTVTSEYRLAPTAMDNAKDLTCLVTHRTQLKDESLPL
KLAIQYPPVVEIEGYDNNWYVGRTNVGLLCKANANPIPLSVEWKTMTGEMPDTVQIKENE
LKVLKVDSSVNTTFVCEVKNSIGATREQVTINVREPSKTESNAGVVAGAVIGSLLALLLV
AALVTVLVTRSRRQQQGYRANGGSDMKTRIFGGGKKASKNGTSGGTGSGGVAGGNNNGPV
YIDRSPNQGLGEKNNHHQPFTVGARPEVVTGTPTAQDILLSNELDEAERRKFDEMEEDER
YDHFAGGGSILQLRPPPNPDDMIGDYMDDDMESQRDGSVISRTAVYV
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggcgaggcatgacgcccgaaatgtgcccgcaaaaatgttcgggctgctcttctttgcg
gcgtcgatactcctccgacacgggacatcgggtcagcgggtgaaggtggaaccagaacta
gcttcatatcccggccagacggtcaacctacgctgcgccttcccggacccgacagggatt
cagctaacaatggtcacttggatatacgagccaaaggatggagagaggatgaacatagct
gtgttccaccctaactttggccccaactaccctgaatcccagatgaagggcagagtcacc
ttcagacccagtccgccagagctgtccagtccttccatcgagatcagtaacgtcaggatg
acagacgagggtcggtacgtctgcgaatacgcaacttatcctgacggcaacgagcagggc
atcactcagctggtcatgttggccaagcccttgaactccgccaccgccgtaacggtgaac
gccggtactcagccggtcgtggtggcccgctgcgagtccaaagatggccgcccggcagca
aagatccaatggttgaccacagctaaaggcaactggacagaaaaatctcaaacgggcgcc
gacaacacggtgacggtgacgagcgagtaccgcctggcgccgacggccatggacaacgcg
aaggacctcacctgtctggtgacacacaggacccagctcaaagacgagagcctcccactg
aagctagccattcagtacccccctgtggttgaaattgagggatatgacaacaattggtac
gtgggccgtacaaacgtggggctcctctgcaaggctaacgcaaaccccattcctctctct
gtggagtggaaaacaatgacaggagagatgccagataccgtgcagatcaaagaaaatgag
ctcaaggtgttgaaagtggacagttctgtcaacaccaccttcgtgtgcgaggtcaagaac
agcatcggggccaccagggagcaggtcacgatcaacgtcagagagccttcaaagaccgaa
tccaatgctggtgttgtggcaggggcggttataggctccctgctggccctccttttggtc
gccgccctcgttaccgtgctcgtcacccgtagccgtaggcagcagcagggttaccgggcc
aacggtggcagcgacatgaagacacgcatattcggcggcggcaagaaggcgagcaagaac
ggaacaagcggaggaacgggaagcggcggcgttgcgggtggtaataacaacggacccgtc
tacatcgatcgctcacccaaccagggtctgggagagaaaaacaaccaccaccagccgttc
accgtgggcgcccggcctgaggtcgtcaccggcacacccaccgcccaggacatcctgctg
agcaacgaattagacgaagcagagaggaggaagtttgacgagatggaggaggacgagaga
tacgaccacttcgctggaggaggctcgattctgcaactgcgcccccctcccaacccggac
gatatgattggagattacatggacgatgacatggagtcccagcgggatggctcggtcatc
tcccggactgcagtttacgtatag

DBGET integrated database retrieval system