Xiphophorus hellerii (green swordtail): 116714276
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Entry
116714276 CDS
T07363
Symbol
nectin2
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03266
Virion - Herpesvirus
xhe04514
Cell adhesion molecule (CAM) interaction
xhe04517
IgSF CAM signaling
xhe04520
Adherens junction
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116714276 (nectin2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116714276 (nectin2)
04517 IgSF CAM signaling
116714276 (nectin2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116714276 (nectin2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116714276 (nectin2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116714276 (nectin2)
04090 CD molecules [BR:
xhe04090
]
116714276 (nectin2)
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Nectin family
116714276 (nectin2)
CD molecules [BR:
xhe04090
]
Proteins
116714276 (nectin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
ig
Ig_3
I-set
Ig_2
Ig_PVRIG
TM_ErbB1
C2-set_3
ChitinaseA_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
116714276
NCBI-ProteinID:
XP_032410643
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Position
3:complement(12308785..12426604)
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AA seq
527 aa
AA seq
DB search
MARHDARNVPAKMFGLLFFAASILLRHGTSGQRVKVEPELASYPGQTVNLRCAFPDPTGI
QLTMVTWIYEPKDGERMNIAVFHPNFGPNYPESQMKGRVTFRPSPPELSSPSIEISNVRM
TDEGRYVCEYATYPDGNEQGITQLVMLAKPLNSATAVTVNAGTQPVVVARCESKDGRPAA
KIQWLTTAKGNWTEKSQTGADNTVTVTSEYRLAPTAMDNAKDLTCLVTHRTQLKDESLPL
KLAIQYPPVVEIEGYDNNWYVGRTNVGLLCKANANPIPLSVEWKTMTGEMPDTVQIKENE
LKVLKVDSSVNTTFVCEVKNSIGATREQVTINVREPSKTESNAGVVAGAVIGSLLALLLV
AALVTVLVTRSRRQQQGYRANGGSDMKTRIFGGGKKASKNGTSGGTGSGGVAGGNNNGPV
YIDRSPNQGLGEKNNHHQPFTVGARPEVVTGTPTAQDILLSNELDEAERRKFDEMEEDER
YDHFAGGGSILQLRPPPNPDDMIGDYMDDDMESQRDGSVISRTAVYV
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcatgacgcccgaaatgtgcccgcaaaaatgttcgggctgctcttctttgcg
gcgtcgatactcctccgacacgggacatcgggtcagcgggtgaaggtggaaccagaacta
gcttcatatcccggccagacggtcaacctacgctgcgccttcccggacccgacagggatt
cagctaacaatggtcacttggatatacgagccaaaggatggagagaggatgaacatagct
gtgttccaccctaactttggccccaactaccctgaatcccagatgaagggcagagtcacc
ttcagacccagtccgccagagctgtccagtccttccatcgagatcagtaacgtcaggatg
acagacgagggtcggtacgtctgcgaatacgcaacttatcctgacggcaacgagcagggc
atcactcagctggtcatgttggccaagcccttgaactccgccaccgccgtaacggtgaac
gccggtactcagccggtcgtggtggcccgctgcgagtccaaagatggccgcccggcagca
aagatccaatggttgaccacagctaaaggcaactggacagaaaaatctcaaacgggcgcc
gacaacacggtgacggtgacgagcgagtaccgcctggcgccgacggccatggacaacgcg
aaggacctcacctgtctggtgacacacaggacccagctcaaagacgagagcctcccactg
aagctagccattcagtacccccctgtggttgaaattgagggatatgacaacaattggtac
gtgggccgtacaaacgtggggctcctctgcaaggctaacgcaaaccccattcctctctct
gtggagtggaaaacaatgacaggagagatgccagataccgtgcagatcaaagaaaatgag
ctcaaggtgttgaaagtggacagttctgtcaacaccaccttcgtgtgcgaggtcaagaac
agcatcggggccaccagggagcaggtcacgatcaacgtcagagagccttcaaagaccgaa
tccaatgctggtgttgtggcaggggcggttataggctccctgctggccctccttttggtc
gccgccctcgttaccgtgctcgtcacccgtagccgtaggcagcagcagggttaccgggcc
aacggtggcagcgacatgaagacacgcatattcggcggcggcaagaaggcgagcaagaac
ggaacaagcggaggaacgggaagcggcggcgttgcgggtggtaataacaacggacccgtc
tacatcgatcgctcacccaaccagggtctgggagagaaaaacaaccaccaccagccgttc
accgtgggcgcccggcctgaggtcgtcaccggcacacccaccgcccaggacatcctgctg
agcaacgaattagacgaagcagagaggaggaagtttgacgagatggaggaggacgagaga
tacgaccacttcgctggaggaggctcgattctgcaactgcgcccccctcccaacccggac
gatatgattggagattacatggacgatgacatggagtcccagcgggatggctcggtcatc
tcccggactgcagtttacgtatag
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