Xiphophorus hellerii (green swordtail): 116714597
Help
Entry
116714597 CDS
T07363
Symbol
sqstm1
Name
(RefSeq) LOW QUALITY PROTEIN: sequestosome-1
KO
K14381
sequestosome 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04137
Mitophagy - animal
xhe04140
Autophagy - animal
xhe04217
Necroptosis
xhe04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116714597 (sqstm1)
04137 Mitophagy - animal
116714597 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
116714597 (sqstm1)
04218 Cellular senescence
116714597 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116714597 (sqstm1)
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116714597 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116714597 (sqstm1)
Membrane trafficking [BR:
xhe04131
]
Autophagy
Mitophagy
Cargo receptors
116714597 (sqstm1)
Pexophagy
116714597 (sqstm1)
Aggrephagy
116714597 (sqstm1)
Xenophagy
116714597 (sqstm1)
ER-phagy
ER-phagy recepters
116714597 (sqstm1)
Other autophagy associated proteins
Midbophagy
116714597 (sqstm1)
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
116714597 (sqstm1)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116714597 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
116714597
NCBI-ProteinID:
XP_032411164
LinkDB
All DBs
Position
23:597267..601300
Genome browser
AA seq
434 aa
AA seq
DB search
MSVTVKAYLLGKDEQVKEIRRFAVDQEVSCSFEYLSRKVAAVFSNLSGSTYSLFYKDEDG
DLVAFSSDDELMMGLSFVKDATFRLYIRERKEHRRDFPLHAFPPFAFGPPPPHHHGPAHT
APPPHMAPPPAVHPNVTCDGCEGAVVGTRFKCSVCPDYDLCSSCQAQGKHTEHALLPIWH
PLQHWFPRGKWMKRMRHCGMWNQNQEQNQNQEQAGAAKPAADSSAPSASQASVDFLKNIG
EGVAAMLSPLGIDVDIDVEHEGQKTKVTPPTQSGAGPGDVEMNEDGGASNEDGVNQGSKV
SQQLYKPWNRSGINEFLIRTPGCVSRDSDEEWTHLSSKEVDPSTGELQSLQPEGREPPEP
GAPQQGPTGLREAALYPHLPQEADPRLVESLAAMLSMGFGDEGGWLTHLLQAKNGDIGAA
LDAIQYAKQPRPHQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacagtaaaggcctacctgctggggaaggacgagcaggtgaaggagatccgc
cggttcgcggtggaccaggaggtttcctgcagcttcgagtacctgagccggaaggtggcg
gccgtcttctccaacctgagcggctccacctacagcctcttctataaagatgaagatgga
gacctggtggcgttctcctccgacgatgagctgatgatggggctgagcttcgtgaaggac
gccacgttccgcctctacatcagagagaggaaggagcaccgtcgggacttccctcttcac
gccttcccccccttcgccttcggcccccctcctcctcatcatcatggccccgcccacacg
gccccgcccccccacatggccccgcctcccgccgtccaccctaacgtgacgtgcgacggc
tgcgaaggcgcggtggtgggaacgcgcttcaaatgctcggtgtgtccggactacgacctt
tgctcctcctgccaggctcaggggaagcacactgagcacgctctgctgcccatctggcac
cccctgcagcactggtttcctcgggggaagtggatgaagaggatgagacactgtggaatg
tggaaccagaaccaggagcagaaccagaaccaggagcaggccggggctgctaaacctgca
gcggacagcagtgccccctctgcctcccaggccagcgtggacttcctgaagaacatcggt
gagggcgtggccgccatgctgagcccgctgggcatcgacgtggacatcgacgtggagcac
gaaggtcagaagaccaaggtgaccccgcccactcagagcggcgcagggccaggtgacgta
gagatgaacgaagatggcggagccagcaacgaggacggagtcaaccaagggtcaaaggtc
agtcagcagctttacaaaccctggaaccgatcagggatcaatgagtttctgatcagaact
cctggctgcgtgagccgggactctgacgaggagtggactcacctgagctccaaggaggtg
gacccgtccacaggtgagctgcagtcgctgcagccggagggccgggagccaccggagccc
ggggccccgcagcaggggcccaccggcctgcgggaggccgcgctctacccacacctgcct
caagaagccgacccgcgtctggtggagtcgctggcggccatgttgtccatgggcttcggc
gacgaaggcggctggctgactcacctgctgcaggccaagaacggcgacatcggcgctgcg
ctcgatgccatccagtacgccaagcagccccgcccacaccagtga
DBGET
integrated database retrieval system
