Xiphophorus hellerii (green swordtail): 116715627
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Entry
116715627 CDS
T07363
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116715627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116715627
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
116715627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
116715627
NCBI-ProteinID:
XP_032412049
LinkDB
All DBs
Position
24:complement(17219468..17272041)
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AA seq
1336 aa
AA seq
DB search
METSSPPAAQKKDKMDGSSFSDLPKKPSPSETRAPQHLFPTFHTPIPIDIRHHEGRYHYE
PHALHAMHSPAGLTGSPVISDISLIRLSPGAMATSESPFSPPHPYVSPHMEHYLRQVHGS
PTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPPPPGAGAAEYYHLMASHRSPYGELL
LPGPGAPLADYLSPVDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVA
YINNSRSSSAASSSYGHLSVGGLSPSFPFPHPINPMAYQQLLSQQRGLSAFGHNPPLVHP
PPTFSSRQPGLGLSCLPTSTHNNDVSSKNHGGDSAVSSSVDPINKRSKVKAELDGMKPGS
PLSPNQYSGAQDLKEDVERDECKQEAEAVYETNCHWDGCSQEYDTQEQLVHHINNDHIHG
EKKEFVCRWDDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLR
SHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHV
KTVHGPEAHVTKRQRSDLPPRPPRENGENERAGRLHREDKLLENSSPRVTEEYLHMKSIK
TENPVMHQSSPGGQSSCSSEPSPLGTNNDSGVETAAHSGGSLGDLSALDDLPFLDSVDFS
GGVAAVGLHLRKQLSGSQCLENLKKEKLKAVRDSCRWANNPTPPAHQGTTLPPIPTSGSL
LENSSLCGDPASFPGSGKMTLLGNLSERRDSTSSTFSSVYTLSRRSSGISPGFSSRRSSQ
TSQFAANRLTNISSADSYDPISADISRRSSQASQFGGNNSGPGAASPLTLTPAQHYRLKA
KYAAATGGAPPTPLPYPDQSCLKDFNEYSSKNSLRSLQFSKERSLMPHEVPSNIPRRASD
PVRPLDPLNQRPLDPLNQPPLHRFNSMVSLNRRVSLQPHPPPAKDHRRLSQQVYAQPNVS
PRGFPHSLQPASISEDNIMQTRRCNGNPSGQGDFHGAGSGQQQLYHQRRMDGANRSPLMS
PSSPHGGAASGQWDMDTTQQYSRLDPRGNLIVVQQNQNAGSFSGTSHQQIVQHFNNRCMK
PGQHHFQQSSNLNEASSPQHRFSQSSYDRNGNAPYPPCGNILHCKEEPVDMDFGQLQPAQ
IKTESCDSSTMTLDQQNCNMTGFRTGNQNHPQLRPPTEPNSPNVSIPKVLTPPDDSQLSS
SRVSELSYISEDNALFYTGQIRVLEPNGNLDCHVSLLVSSPSAAPADNQGSRTAPEHPQI
DFDSMLDDGDHSSLMSGTLSPGLLQSFSQSSSRLTTPRSSLTLPSVPTGTGNMAVGDMSS
LLSALAEENKFLNLIS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcgtcaccgccagccgcacagaaaaaggacaaaatggacggcagcagcttc
agcgacctccccaagaagccgtcgccctcggagaccagagcgccgcagcacctcttcccc
accttccacacgccgatccccatcgacatccgccatcatgagggccggtaccactacgag
ccgcacgcgctgcacgccatgcacagccctgcaggtctgaccggcagccccgtcatctct
gacatctccctgatccgcctgtcgcccggcgccatggcgaccagcgagtcgccgttcagc
ccgcctcacccgtacgtgtcgccccacatggagcactacctgcgccaggtgcacggcagc
cccaccctgtccatgatctcagccgccagaggcctcagcccagcagacctggctcatgag
catctgaaggagcgcggcctgtttggccttcctcctcctcctcctcctcccccgggggcc
ggcgcggcggagtactaccacctgatggccagccaccgcagcccctacggcgagctgctg
ctgccggggcccggggccccgctggccgactacctctctcctgttgacgtgtcccggttc
tccagccccagactgacgcccagactcagcaggaagagggcgctgtccatctcgccactg
tccgacgccagcatcgacctccagaccatgatcagaacttcgcccaactccttggtggcg
tacatcaacaactcgcggtccagttcagccgccagcagctcctacggacacctgtcggtc
gggggactcagcccgtcgtttcccttccctcaccctatcaaccccatggcctaccagcag
ctcctgtcccagcagcgcggcctcagcgccttcggccacaacccgcccctcgtccaccct
ccacccactttctccagtcgccagccgggcctcggcctctcctgcctgcccacctccacc
cacaacaacgacgtgtcatccaagaaccacggaggagactctgctgtcagcagctcggtg
gatcccatcaacaaacgctccaaagtgaaggcggagttggacggcatgaagccgggatct
cctctgtcaccgaaccagtacagcggcgctcaggacctgaaggaggacgtggagcgagac
gagtgcaagcaggaggccgaggccgtttacgagaccaactgtcactgggacggctgcagc
caggagtacgacacgcaggagcagctggtgcatcacatcaataacgaccacatccacgga
gagaagaaggagttcgtgtgccgctgggacgactgctcgcgggagcagaagcccttcaaa
gcgcagtacatgctggtggttcacatgcgccggcacacgggggagaaaccacacaaatgc
acgttcgagggctgctccaaggcctactcccgcctggagaacctgaagacccatctgcgc
tctcacaccggggagaaaccctacgtctgcgagcacgaaggctgcaacaaggccttctcc
aacgcctcggaccgggccaagcaccagaaccggacgcactccaacgagaaaccgtacgtg
tgtaaaatcccgggctgcaccaagcgctacacggaccccagctctctcaggaagcacgtg
aagacggttcacggaccggaggcccacgtcaccaagaggcagcgcagcgacctgccgccc
agaccccccagggagaacggcgagaacgagagagccggcaggctccacagggaggacaag
ctgttggagaacagctcccccagagtcacggaggagtacctgcacatgaaatccatcaag
acagaaaaccctgtgatgcatcagtccagtcctggcggtcagtcatcgtgtagcagcgag
ccgtcaccacttggcaccaacaatgacagtggagtagaaacagcggcgcacagcgggggg
agcctgggggacctcagcgcgctggacgacctgccgttcctggactctgtggatttctcc
ggcggggtcgcagcggtcggcctccatctcagaaagcagctgagcggcagccagtgcctg
gagaacctcaagaaggagaagctgaaggcggtacgggactcgtgtcggtgggccaacaac
ccaacaccccctgctcatcaagggaccacgctgccgcctataccgacaagcgggtccctc
ctggaaaattcaagcctgtgtggagatccagcctccttccccggctctggcaaaatgact
ctgctgggaaacctttctgagcgcagagacagcacttccagcaccttcagctcggtctac
acgctcagccgccgctcctcaggcatctcccctggtttctccagtcgacgctcgagccaa
acttctcagtttgctgccaaccggctgacgaacatcagctcagcggactcctacgacccc
atctctgctgatatttctcggcgctccagtcaggccagtcagtttggggggaataatagt
gggcctggggctgccagccctctcaccctgaccccagcccagcactaccgactgaaggca
aagtatgctgctgcaactggtggtgcacctcctacacctcttccatacccggatcaatca
tgtctgaaggatttcaatgagtactcgtccaaaaacagcctccgatccttacagttcagc
aaggaacggagcttgatgccccatgaagtaccttccaacattccccgtcgagccagtgac
cctgtgagacctttagatcctctcaaccagcgacctttagatcctctcaaccagcctcct
ctacatcggttcaacagcatggtctcactcaaccgaagggtctccttgcagcctcatccc
cctcctgcaaaagatcacagacgcttatcccagcaagtgtatgcacaaccgaacgtcagt
ccccgtggtttccctcacagcctgcaaccagcaagcatttcggaggacaacatcatgcag
acaagaaggtgcaatggaaatccctctggtcaaggagatttccacggagctggcagcggc
cagcagcagctgtaccaccagagacggatggatggggcgaacaggagtccactcatgagt
ccatcctcaccacacggcggtgctgctagtggacagtgggacatggacaccacccagcag
tattccaggctagatccacgtgggaatctgattgtcgtccaacagaaccagaacgctggg
tctttcagtgggacctcccaccagcagatagtccaacacttcaacaacaggtgcatgaaa
cctggacagcaccacttccagcagtcctcaaacctcaatgaagcttctagccctcagcac
aggttcagtcaaagttcctatgacaggaatggcaacgctccgtatccaccttgtgggaac
atcctgcactgtaaggaggagccagttgacatggactttggtcaactccagcctgcgcag
ataaaaactgagagttgtgattcatccaccatgactttagaccagcagaactgtaacatg
actggtttccggactgggaatcagaaccatccccagctgagaccaccaacagaacctaac
tctccaaatgtctcaataccgaaggtgttgacgccaccagatgattcccagctctcctct
agtagagtttctgaactctcttacatctctgaggacaacgctctgttctacacgggtcag
atccgagtcctggagcccaacgggaacctggactgtcacgtttcccttctggtgagctct
ccttcagctgctccagccgacaaccaggggagcaggactgcacctgagcaccctcagata
gactttgatagcatgctggacgatggggatcactccagcctcatgtcaggaaccctgagt
ccaggacttctccagagtttctcccagagttcgtctcgcctcacgacgccccggagctcg
ttgacactgccctcagtcccgacgggaaccgggaacatggccgtcggggacatgagctca
ctgttgagcgccctggctgaggagaacaagttcctcaacctgattagctaa
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