Xiphophorus hellerii (green swordtail): 116716537
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Entry
116716537 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: ryanodine receptor 1-like
KO
K04961
ryanodine receptor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116716537
04020 Calcium signaling pathway
116716537
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116716537
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116716537
04040 Ion channels [BR:
xhe04040
]
116716537
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116716537
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116716537
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Ryanodine receptor
116716537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RR_TM4-6
RyR
RIH_assoc
Ion_trans
RYDR_ITPR
EF-hand_7
YebO
Motif
Other DBs
NCBI-GeneID:
116716537
NCBI-ProteinID:
XP_032413250
LinkDB
All DBs
Position
Unknown
AA seq
2844 aa
AA seq
DB search
MRSLPKAYTINEVSIQDTMDLLECLGQIRSLLIVQMGPEEERLIIQSIGYPFAEQRIGLG
MRGSTPLDVAAASCIDNNELALALQEQDLEMVVKYLAGCGLQSCPMLLAKGYPDIGWNPC
GGEKYLDFLRFAVFVNGESVEENANVVVRLLIRRPECFGPALRGEGGNGLLAAVEEAIKI
SEDPARDGPSIKKDRRFPMFGGEEQQEENRVHLGNAIMSFYSALIDLLGRCAPEMHLIQA
GKGEALRIRAILRSLVPIEDLVGVISLPVQIPALGKDNSIIEPKMSASFVPDHKAPMVLF
LDRVYGIDNQDFLLHVLEVGFLPDMRAAASLDTAAFSTTEMALALNRYLCTAVLPLITKC
APLFAGSDHRAIMIDSMLHTIYRLSRGRAFTKAQRDIIEECLMALCKNLRPAMLQHLLRR
LVFDVPILNEYAKRPLKLLTSHYERCWKYYCLPNGWANFGVASEEELHLTRKXFWGIFES
LAHKKFDAEIFKISMPCLCAIAGAIPPDYVDASYSSKTEKKASVDAEGNFDPKPVETTNT
IIPERLDPFINRYAEYTHDKWAFEKIQNNWSYGEVLDENAKTHPMLRPYKTFSEKDKEIY
RWPIKESIKAMLAWEWNIEKAREEEESEKKKAASRKISQTAQATYDPSHGYSPQPIDISH
MALSRDLQSMAEQLAENYHNTWGRKKKLELQGKGGGTHPLLVPYDTLTAKEKARDREKAY
ELLKFLQLNGYAVTRGMKDMESEISSIEKRFAYGFLQKLLKWMEIAQEFIAHLEAVVSSG
RVEKSPHEQEIKFFAKILMPLINQYFKNHCLYFLSTPAKVLGSGGHSSNKEKEMIASIFC
KMAALVRHRVSLFGTDASAIVNCLHILARSLDARTVMKSGPEIVKAGLRSFFESAADDVE
KMVENLKLGKVSKGNQQVKGVSQNINYTTIALLPVLTSLFDHVAQHLFGDDVMLDDLQIS
CYRIMCSIYSVGTVKNPHVERQRPALGECLAHLAAAMPVAYLEPHLNEFNAFSVYTTKTP
RERSILGLPNAVQELCPDIPPLDLLLKEIGDLAESGARYTEMPHVIEITLPMLCNYLPRW
WERGPENFPEVEGQLCTEVTSEHLNQLLGSIMKIVVNNLGIDEASWMKRLAVFSQPIVSR
AKPEMLKSHFIPTMEKLKKRTSKVVAEEDHLRMEGKSEGDEEDGTIRDEFAVLCRDLYAL
YPLLIRYVDNNRARWLTCPDPDAEELFRMVGEVFIFWSKSHNFKREEQNFVVMNEINNMS
FLTADSKSKMSKGGDTEGGGSDTERTKKKKRGDRYSVQTSLIVAALKKMLPIGLNMCSPA
DQELINLAKIRYSLRDTDEEVREFLQNNLHLQGKVDNPSMRWQMALYKEMAGKAEDADAP
VKVVKRVQEVSAVLYHLEVTEHPFKSKKMVWHKLLSKQRRRAVVACFRMTPLYNIARHRA
SNMFLEGYKRNWIQTEGCSFEDRMIDDLSKAMEQEEAEEEEERETKPDPLHQLILHFSRT
ALTEKSKLDTDHLYMAYADIMAKSCHIGEEEEMAEELMEQSEDEMSFEVRQSELEKEMEK
QRLLYQQSRLHNRGAAEMVLQMISACKGETGPMVSTTFKLGISILNGGNSEVQRKMLEYL
KDKKDVGFFLSVQALMQTCCVLDLNAFERQNKAEGLGMVSEEGTNLNLDRDEKVMADDEF
TCDLFRFLQLLCEGHNNDFQNYLRTQTGSTTSINVIICTVDYLLRLQESISDFYWYYSGK
DIIDDPGKKNFSKAMTVAKQIFNSLTEYIQGPCTGNQQSLAHSRLWDAIVGFLHVFAHMM
MKLAQDSSQIALLKELLDLQKDMVVMLLSLLEGNIVNGTIARQMVDMLVESSSNVEMILK
FFDMFLKLKDIVASDAFRDYVSDPRGLISKKDFQKAMDSQKQYSPSEIQFLLSCSEADEN
DMINYEEFSNRFQEPAKDIGFNIAVLLTNLSEHVPHDCRLQNFLAQAESVLNYFRPFLGR
IEIMGASRKIERIYFEISEVNRRQWEMPQVRESKRQFIFDVVNEGGESEKMEMFVNFCED
TIFEMNIASQISEQEEEEKGEEDDEGDEGGGEGXAAGGGGDEDGNGDEGRPESTSAFTDF
LHSMSSFLSIFTFRNLRRQYRRIRKMTFKEIVVALSKFVWAILMSILTFIYNVCKGFFMI
IWQALFGGGLVEGAKNITVTEILASMPDPTQDDVHGDGPGELGTGEEQEAGGITDTGESG
SGEEEEEDTQENEGGRIPGMDAPGGLGDMGVEEPVEPPTPEGSPITKRKMPGEESDASQK
PPEPAPVEETPPEPEKSDVETGEKSEKVAKSKEEEKPQEPKKSAAKKEKKQKKHQGFQIW
TELETQRNKFMNYLSRNFYNLRFLALFLAFALNFILLFYRVSDTPPEGGEMEGSGLSEGS
GLFEGSGLFEGCGDEAEGSGADGGGEDEEEDVLLYFYLEESTGYMQPTLSFLAILHTVIS
FICIIGYNCLKIPLVIFKREKELARKLEFDGLYITEQPEDDDIKGQWDRLVLNTPSFPNN
YWDKFVKRKVLDKYGDIYGRERIAELLGVDLASLDVSQQHEKKQEEPDNSVFAWVTSIDI
KYQIWKFGVVFTDGTFLYLCWYLVMSLLGHYNNFFFACHLLDIAMGVKTLRTILSSVTHN
GKQLMMTVGLLAVVVYLYTVVAFNFFRKFYNKSEDEDEPDMKCDDMMTCYLFHMYVGVRA
GGGIGDEIEDPAGDEYELYRVVFDITFFFFVIVILLAIIQGLIIDAFGELRDQQEQVKED
METKCFICGIGSDYFDTTPHGFETHTFDEHNLANYMFFLMYLINKDETEHTGQESYVWKM
YQERCWDFFPAGDCFRKQYEDQLS
NT seq
8535 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcacttcccaaggcttacaccatcaacgaggtgtcgatacaggacaccatggat
ctcctggagtgcttgggtcagatccgctccctgcttattgtgcagatgggtccagaggag
gagaggctcataattcaaagcattggctacccttttgcagaacagcgcattggccttgga
atgcgcggctctaccccgctggatgtggctgcggcatcttgcatcgacaataacgaactg
gcactggctctccaggagcaggatttagaaatggtggtgaaatacttggctgggtgtggg
cttcagagctgccccatgctgctggctaaaggctaccccgacatcggttggaatccctgt
ggtggagagaaataccttgactttcttcgttttgctgtttttgtcaatggagaaagcgtg
gaagagaatgccaacgttgttgtgcgtcttctcattcgaagacccgagtgcttcggtccg
gctttgagaggcgagggtggtaatggtctgctggctgctgtggaggaagccatcaaaata
tcagaggaccctgcaagagatggtcccagcattaaaaaagacagacgttttcccatgttt
ggaggagaagagcagcaggaggagaatcgagtgcacctcggaaatgccatcatgtccttc
tattctgctctcattgacctactgggacgatgtgctccagagatgcatttgattcaagct
ggaaagggtgaagctcttcggatcagggcaattctgaggtccttggttcctattgaggat
cttgtaggagtgatcagtcttcctgttcagattcctgctttggggaaagacaatagcatc
atagagccaaagatgtccgctagttttgtgccagaccacaaggcccccatggtgttattc
ctggatagagtttatggtattgacaaccaggatttcctgctgcatgtcctggaggtgggc
ttcttacctgacatgagggctgccgcctctctggacacagccgctttcagcacaacagag
atggctctcgctttgaaccgctatctgtgtactgccgtgctgccactcatcaccaagtgt
gccccactgtttgccggcagtgaccaccgagccataatgatagactccatgttgcacacg
atctacagactgtctcgaggacgagcctttacaaaggcacagagagacatcatagaggag
tgcctcatggctttgtgcaaaaatttgcgcccggccatgcttcagcacctgctgagacgc
ctggtgtttgatgtgcccattctaaatgagtatgccaaacgaccactgaagctactgacc
agccactatgagcgttgttggaaatattactgcctcccaaatggctgggctaattttgga
gttgcttcagaggaagagctgcatttgactcgcaaanctttctggggtatttttgaatca
ttggcacacaagaaatttgatgctgaaattttcaagatctcaatgccctgcctctgtgcc
attgctggagccattcctccagattatgtggatgccagctactcctccaaaacagagaaa
aaggcatcggtagatgcagagggaaactttgatcccaaaccagttgagaccacaaacacc
attatccctgaaagactggatccctttatcaacagatatgctgaatacacccatgataaa
tgggcttttgaaaagattcaaaataactggtcatatggagaggtgttggatgagaatgca
aagacccatcccatgctcagaccatacaaaacattctcagagaaggacaaagagatctac
cgctggccgatcaaagagtcgataaaagccatgctggcatgggaatggaacatagaaaaa
gctagagaggaagaggagtcagagaagaagaaggcagcttctagaaaaatttcccagact
gcccaggcaacttatgacccgagccatggctacagtccacagcctattgacatctcacac
atggctctttcaagagatctgcagtcgatggcagagcaactggctgaaaattatcacaac
acctggggacgaaagaaaaagttagagctccaaggaaaaggaggtgggacacatcctctg
ctggtgccttatgacactctgacagcgaaggaaaaggccagagaccgagagaaggcttac
gagttgctcaagttcctgcaacttaatggatatgctgtcacgaggggcatgaaagacatg
gagtctgagatatcgtctattgaaaagagatttgcttatggattcctgcagaagctgttg
aaatggatggaaatagcccaggagttcattgctcatctcgaggctgtggtgagcagtgga
cgagtagaaaagtctcctcatgagcaagaaatcaaattctttgctaagatattgatgcct
ttaatcaaccagtacttcaaaaatcactgcctttacttcttatcaacacctgcaaaagtc
ctgggcagtggcggccattcttctaataaggagaaggagatgattgcgagtatcttctgt
aaaatggctgctttggtgaggcacagagtttctctctttggaacggatgcttctgcaata
gttaactgtcttcacatattggcccggtcgttggatgcaaggactgtgatgaaatcaggt
cctgagattgtgaaagcaggcttgcggtcattcttcgagagtgcggccgacgatgtggag
aagatggtggagaacctcaaactgggcaaagtgtccaaaggcaatcagcaagtgaaaggt
gtttcccagaatatcaactacacaaccattgccctgctgcctgtgcttacctccctgttt
gatcacgtcgctcagcatctcttcggagatgatgtcatgctggatgatctgcagatttct
tgttatagaatcatgtgtagcatctactcagttgggacggtcaagaacccacatgttgag
aggcaaagaccagctcttggggaatgtctggctcatcttgctgctgcaatgccagtggcc
tacttagagcctcatctaaatgaattcaatgctttttctgtgtacaccacaaagacacca
agggagagatctatcctgggtcttcccaatgcggttcaggagttatgtcctgacatccca
ccgctggaccttctgctaaaggagattggagacttggcagagtcgggggcccgctatact
gagatgcctcacgtcattgaaatcactctgcccatgctgtgcaactacctgccacggtgg
tgggagagaggacctgaaaactttcctgaggtggagggtcaactctgcaccgaggtcact
tcagaacacctgaatcaacttctgggaagcatcatgaaaattgtagtcaacaatctgggt
attgatgaagcctcctggatgaagagattagctgtgttttcgcagcccattgtgagcaga
gcaaagccagagatgctgaagtcccacttcattccaacaatggaaaagttgaagaaacgg
acgtcaaaggtggtggctgaagaggatcatttgcggatggaggggaaatcagagggggat
gaggaagatgggacaatacgcgatgaatttgctgtgctctgtagagacttgtatgccctc
tatcctctacttattcgctatgtggacaacaacagagcgaggtggttgacctgccctgat
ccagatgcagaagaacttttccgaatggttggagaagtctttattttctggtccaaatcc
cataacttcaagcgagaagaacagaactttgttgtgatgaatgagatcaataacatgtca
ttcctcactgctgacagcaaaagcaaaatgagcaagggcggtgacacagagggtggaggc
tcagacactgagcgcaccaagaagaagaaacgtggagatcgctactctgttcagacgtca
cttattgttgctgccttgaagaagatgctgcccatcggtctcaacatgtgctctcctgct
gatcaggagctcatcaacttggccaaaatccgctactctttaagagacacagatgaagaa
gtaagagagttcctgcagaacaacctccatcttcagggcaaggtggacaacccctccatg
cgctggcagatggccctttacaaagagatggcaggaaaggctgaagatgctgatgctcca
gtgaaagttgtcaagcgagtacaggaggtgtctgctgtcctctaccatcttgaagtgacg
gagcatccttttaaatccaagaagatggtgtggcacaaattgctgtctaagcagagacgc
agagccgtggtggcctgcttcagaatgacaccactttacaacattgcaaggcacagagct
tcaaacatgttccttgagggatacaagcgcaactggattcaaactgagggttgctcattt
gaggacaggatgatagatgatttatctaaagcgatggagcaggaagaagcagaggaagaa
gaagagagggaaaccaagccagatccccttcaccagcttattcttcacttcagtcgaaca
gcgctgacagaaaagagcaaactcgatacagatcatctgtatatggcatatgcagacatt
atggcaaagagttgccatattggtgaagaagaagaaatggcagaggaattgatggaacaa
tctgaagatgagatgtcctttgaggtgcgacagtcagaactggaaaaagaaatggagaag
caaaggcttctttaccaacagtccagacttcataaccgtggcgctgcagaaatggtcctg
caaatgataagtgcctgcaaaggtgaaactggcccaatggtatctacaaccttcaagctg
ggcatttctatccttaatggcggaaacagcgaggttcagcggaaaatgttggagtacctg
aaagacaaaaaggacgtgggcttctttttgagtgtccaagctctaatgcagacttgctgc
gtactggatttaaatgcctttgagaggcaaaacaaggcagaggggcttggcatggtttca
gaggaaggaacaaacttgaacctagatcgggatgagaaagtcatggcggacgatgagttc
acttgtgacctgttccgtttcctgcagctcctctgtgaaggtcacaataatgattttcaa
aactacttgcggacacagacaggaagcacaaccagcatcaacgtcatcatctgcactgtg
gattacctccttcgactccaggaatctatcagtgatttctactggtattattctgggaag
gatatcatcgatgatccaggcaaaaagaatttctccaaagctatgacagtggcaaaacag
atttttaacagtttaacagaatatattcagggcccgtgtacaggcaaccagcagtcctta
gctcacagcagactgtgggatgctattgtcggattccttcatgtgtttgcccacatgatg
atgaagttggcacaggactccagtcagattgctctgctgaaggagcttcttgaccttcaa
aaagacatggttgttatgctgctctcactattagagggaaacatagttaatggtacaatt
gcgcggcaaatggtcgacatgttggtggagtcctccagcaacgttgagatgattctcaag
ttctttgacatgtttctcaaactgaaggacattgttgcctctgatgctttccgtgactat
gtctctgaccctcgagggctgatctctaagaaggactttcagaaggctatggacagtcag
aaacagtactccccctctgagatccagtttcttttgtcctgctcagaagcagatgagaac
gacatgatcaattacgaggagttttccaatcgttttcaagagccagccaaggacatcggg
ttcaacatcgcagtgctgctcaccaacctttctgagcatgtgccgcacgactgccggctg
cagaatttcctggcgcaagcagagagtgtgctcaactatttccgcccattccttggccgt
attgagataatgggcgctagcagaaagattgagcgcatctactttgaaatcagcgaagtc
aaccgcagacagtgggaaatgccacaagtgcgagagtccaaacggcagtttatatttgat
gtcgtcaacgagggcggtgaatctgagaaaatggagatgttcgtcaacttctgtgaggat
accatctttgagatgaatatcgcttcacagatttcagagcaggaagaagaggagaaggga
gaagaggatgatgagggagatgaaggagggggagaggggnnggcagcaggtggaggcggg
gatgaagatggcaatggcgacgaaggacgacccgaatcaacctcagcatttacagacttc
ctccacagcatgtcgagcttcctcagcatcttcaccttccgtaacctccgcagacagtat
cgcagaatcagaaagatgacctttaaggagatcgtggtggctttgtccaagttcgtctgg
gctatcttgatgagcatactgaccttcatttacaatgtgtgcaaaggcttcttcatgatc
atctggcaagcgctgtttggaggtggattggtggagggagctaaaaacataacagtcact
gagattttagcaagtatgccagatcccactcaagacgacgtgcacggagatggaccagga
gagctggggacaggggaagaacaagaagctggggggataacagacactggtgaatcgggg
agtggtgaagaggaagaggaggacacgcaggaaaatgaaggaggaaggattccgggtatg
gatgctccaggtggacttggagatatgggtgttgaggaaccagttgagcctccgactcct
gaagggtctcccattacaaagagaaaaatgccaggagaagagtctgatgcaagccaaaaa
ccacctgagcctgctcctgtggaagaaacccctccagaaccagaaaagtcagatgttgaa
actggtgaaaaatctgagaaagtagccaagagcaaagaagaagaaaagccacaagaacca
aagaaatccgcagccaagaaagagaaaaagcagaagaagcaccagggttttcaaatctgg
actgagctggaaactcagagaaataaattcatgaactacctctccaggaacttctacaat
ctgcgatttttggctttgttccttgcatttgccctgaacttcattcttcttttctaccgg
gtctctgatactccacctgaagggggtgagatggagggatccggactgtcggagggaagc
gggttgtttgagggttctggcttgtttgagggctgtggggatgaagctgaaggatctgga
gcagatggaggaggagaagacgaggaagaagatgttctactttatttctatttagaggag
agcactggatacatgcagcccacactatcattcctagccattctccatacagtcatttca
tttatttgtatcattgggtacaactgtctgaagatcccgctggtgatctttaaaagagaa
aaggaacttgcaagaaagctggagttcgatggcctctacatcactgagcagcctgaggat
gacgacatcaagggccaatgggatcgtctagtcctgaacacaccctctttcccaaacaac
tactgggataaatttgtcaaacgaaaagtcctggataagtatggagatatttatgggaga
gaaagaatcgctgagctactgggcgttgatttagcctccttggatgtcagtcagcaacat
gagaagaaacaagaggagccagacaactctgtgtttgcatgggtgacttccattgatatc
aagtaccagatctggaaatttggagttgtgttcacggacgggaccttcctttatctttgt
tggtacctggtgatgtccctgcttggtcattacaacaacttcttctttgcctgccatttg
ctggacattgcaatgggtgtcaaaactctacgcactatcctgtcatcagttacacacaac
ggcaaacagctcatgatgacagtgggcttactggctgtggtggtgtatctttacactgtg
gttgctttcaatttcttccgcaagttttacaacaagagcgaggatgaagacgagcccgac
atgaaatgcgatgacatgatgacttgttacctgttccatatgtacgtgggcgtgcgtgct
ggtggaggaattggagacgagatagaagatcccgcaggagacgaatatgagctttatcga
gtggtctttgatataaccttcttcttcttcgtcattgtcattctgctggccattattcag
ggtctgattattgatgcctttggagaactccgagaccaacaggagcaggttaaggaggac
atggagacaaaatgcttcatatgtggcattggaagtgactactttgatacaaccccacat
ggctttgagacccacacctttgacgaacataacttggccaactacatgttcttcttgatg
tatctcattaacaaagatgagacagaacacactgggcaggagtcatacgtgtggaagatg
taccaggaacgatgctgggacttctttcctgctggagactgtttcagaaagcaatatgaa
gatcagctttcctaa
DBGET
integrated database retrieval system
