KEGG   Xiphophorus hellerii (green swordtail): 116717006
Entry
116717006         CDS       T07363                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04145  Phagosome
xhe04514  Cell adhesion molecules
xhe04672  Intestinal immune network for IgA production
xhe05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116717006
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116717006
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    116717006
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116717006
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116717006
Exosome [BR:xhe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116717006
  Exosomal proteins of epithelial cells
   116717006
  Exosomal proteins of breast milk
   116717006
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta C2-set_3 DUF2627
Other DBs
NCBI-GeneID: 116717006
NCBI-ProteinID: XP_032413951
LinkDB
Position
3:16355737..16357629
AA seq 256 aa
MAQAQGCSVFLVLFLAFSPGGAFYLTVLERCQSSSTDGHDAVLLDQVYFNKILEVEYNST
VGKAIGYTEKAEALAIILNNNPGFITHEIWKTNLCKRNAPLAQKLLTPVEPYVQLRLEKA
EYSQHQQMLICSAYDFYPKQIRVMWLRDGKEVTSDVTSTDELPNGNWLYQIHTYLEFTPK
PGEKITCMVEHASLKKPNLYDWEPEPDSKWSKIVVGSAGLLLGLMFSIAGFIYYKTTSNG
RVVVPTTEDVCPEETL
NT seq 771 nt   +upstreamnt  +downstreamnt
atggctcaggctcagggctgctctgttttcctggtgctttttctggcgttttcaccagga
ggtgctttctatttgactgtgctggaacggtgccagtctagctcaactgacggtcatgat
gccgtgttactggatcaggtttacttcaacaaaatactggaagtagaatacaacagcact
gtaggaaaagcgattgggtacacagaaaaagctgaagcacttgccattattctaaacaat
aatcctgggtttattactcacgagatatggaaaacaaacctctgcaaaagaaatgctcca
ctggcacaaaaactactaactccagtggagccctatgttcagttgaggttagagaaggca
gagtacagtcaacatcagcagatgctcatctgcagcgcgtacgacttctatccaaagcaa
atcagggtgatgtggctgagagacggaaaggaggtcacatctgatgtgacatccactgac
gagctgcccaatgggaactggctttatcagatccacacctacctggagttcacacctaaa
cctggagagaaaatcacctgcatggtggagcatgcaagcctcaagaaaccaaatctttat
gactgggagccggagccggattcaaagtggagtaagattgttgttggctcagcagggctg
ctgctcggtttgatgttttcaattgctggcttcatctattacaagacaacatcaaatgga
cgggtggtggtgcctacaacagaggatgtatgtccagaagaaaccctttag

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