Xiphophorus hellerii (green swordtail): 116717442
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Entry
116717442 CDS
T07363
Symbol
setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00310
Lysine degradation
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116717442 (setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116717442 (setdb1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
116717442 (setdb1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116717442 (setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
116717442 (setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
116717442
NCBI-ProteinID:
XP_032414725
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All DBs
Position
3:complement(14761236..14777409)
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AA seq
1256 aa
AA seq
DB search
MESGDGMEVDDWDPSLEDELGVSLDDLKKWIEEAVEQNEAVKKKKAQLIELEEWVEQKEK
EEAKTEKLLNDANQSVLECEKLVRAAYENNGLVYRESSSEDEGGVGGGGLPSEVIEIDDD
DDDDVIAVGCLVPPKTQTPSKDPTLNEASAVLQKTTQQVQKLVQIVAKPSSVSPLIRTAV
QSVVQPGVQSPTPAIFVSQAPSHQTMTQTQPNPNIKEDELKVGMNILGKKRTKTWHKGNL
VAINSVGNGIFKYKVRFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYA
GIVAEMPNNKNRMRFLIFFDDGYASYVILPELYPVCRPLKRTWEDIEDASCRDFIEEYIS
AYPSRPMVLLKVGQIIKTEWEGTWWKSKVEEVDSSLVKILFLKDDKRSEWIYRGSTRLEP
MFNLKLASANTQEKKLAGHQRTRPNMGALRSKGPVVQYTGVEHVGASPAKPPQTTQSQPP
ATTLIQQLQQRPQPQLIQQVQPSLQTQQPQTQQTQQTPQPSPAAQLQRIENKHQMAKKST
SNFIPGVGGTHASKILQAASANASNLLVGKVQSTPSTPTSSFIPPYQRQTSALVSPPSIV
THAMATIPQQPSYRAPTDRIFYLAHTCQPACLNRVRPAKSDLHRGKNPLLTPLLYDFRRM
TGRRKVNRKMSFHVIYKAPCGLCLRNMGEIQNYLFQTRCDFIFLEMFCLDPYVLVDRPFQ
PQRPFYYILDITSGKEDIPLSCVNEIDTTPPPNVKYSKERIPEDGVFINTSSDFLVGCEC
TDGCKDKSKCSCHQLTLQASGCTPGGQINQSAGYSYKRLEECLPTGIYECNKRCKCCSQM
CTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGD
EYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRMKIQPSALVSSSAARKKAQSSSS
SDDSNDEEEKDSKSEDESDSSDDTFVKDNYYTPSSVWRSYTTRGQAKGNKEGSQDSKDGL
SVSAKGQDDEKPPSMPEETGKSKVASWLTSQGLKKETGDKSQIKTEQSKKQDVMTLSDSD
DVQTISSGSEDNKEREKATPASVSGVTKKQVAVKSTRGIALKNSHSLMVKPSGGGVGPSA
QGSKPGHQGQPGGGAENAPKNTRLFFDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNV
FVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGSTECRGRLL
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcggtgatggaatggaggtcgacgactgggaccccagtctggaggacgagttg
ggagtttcactggatgacctgaagaaatggattgaggaggctgtggagcagaacgaggct
gtgaagaagaaaaaagcccagttgatagagctcgaggaatgggtggaacagaaagagaaa
gaagaggcgaaaacagagaaacttctcaacgatgcaaaccagtccgtattggagtgtgag
aagctggtgagggcagcgtatgaaaacaacggcctcgtctaccgagagagcagctcagag
gatgaaggaggtgtcggaggaggagggctcccctctgaagtcatcgagattgatgatgac
gacgacgatgacgtcatagctgtaggatgtttggttcctccaaagacacaaacgccatct
aaggacccaacattaaatgaagcctctgcagttctgcagaaaaccacccagcaggtccag
aagttggtccaaatagtcgccaagccttcttctgtttctccattgatacgaacagcagtg
caatctgtagttcagccaggagttcagagcccgacaccagcaatatttgtatcacaagct
ccgtctcatcagacgatgacgcagacgcagccaaaccccaacataaaagaagacgagctc
aaagtggggatgaacatcctgggaaagaaacgcaccaagacatggcataaaggcaacctg
gtggcaattaactctgttggaaatggtatatttaagtacaaggtgaggtttgataaaggc
aagagtctgctgtctggaaatcatgtggcgtttgactacaaccccaccctggagagcttg
tacgttggggctcgtgtcgtcgctaagtacaaagacggaaacttggtgtggctgtacgct
ggaatcgtagcagagatgccgaacaacaagaaccgcatgaggtttctgatcttctttgac
gacggctacgcttcatatgtgatccttcctgaactgtatccggtttgcagaccattaaaa
cgaacttgggaagacatagaggatgcatcttgtcgggacttcatcgaggagtacatctcc
gcctatcccagcaggccgatggtgctcctaaaggtcggccagataatcaagacagagtgg
gaggggacctggtggaagagcaaagtggaggaagtggacagcagcttggtcaaaatcctc
tttctgaaggacgataagaggagcgaatggatttacagaggatccaccaggttggagccc
atgttcaatctgaaactggcttcagcaaacacacaagaaaagaagctagctggccaccag
aggacaaggccaaacatgggagcattaaggagtaaaggcccagtcgttcagtacactggc
gtcgaacacgtcggagcttctcctgccaaacctcctcaaacgacacagagtcagccgcca
gcgacgacactgatccagcagcttcagcagcgcccgcagccccagctcatccagcaggtc
cagccatccctgcaaacccagcagccacaaactcaacaaacccagcaaacccctcagccc
tcaccggctgcccagcttcaacgcattgaaaataaacatcagatggcaaagaagagcacg
tctaatttcatccctggtgtcggcgggacgcatgcctccaagatcttgcaggctgcgtct
gctaatgccagcaacctcttagttggaaaagtgcagagcaccccgagtacacccacgtcc
tccttcattcctccgtatcagagacagacgtccgccctggtgtctcctccttccatcgtc
acgcatgcgatggccaccatccctcagcagccgtcctacagagccccgacggaccgcatc
ttctacctggctcacacctgtcagcctgcgtgtctgaaccgcgttcgaccagcaaaatca
gacctgcacagaggaaagaaccctctcctcacgccgctgctctacgatttcagacgcatg
acgggacgacgcaaagtcaaccgtaaaatgtccttccatgttatctacaaggctccgtgt
ggactttgtctgcgtaacatgggggagatccagaactacctcttccagacccgctgtgac
tttatattcttagagatgttctgtctcgacccgtatgtcttggtggaccggcctttccag
ccacaaaggcccttctattacattctagacatcactagtgggaaggaggacatccctctg
tcctgcgtcaatgagattgataccactccaccacctaatgtaaaatacagcaaggagcga
atccctgaagacggagtatttattaacaccagttcagacttcctggtcggctgtgaatgt
accgacggctgtaaagacaaatccaaatgttcctgccaccagctgaccctgcaggcttca
ggctgcacacctgggggacagatcaaccagagcgctggatattcatacaaacgattagag
gagtgcttacctacagggatctatgagtgcaacaaaaggtgtaaatgttgttctcagatg
tgcaccaaccggctggtgcagcacggcctgcaggtccgtctgcagctctttaagacacag
aacaaaggctggggcattcgctgtctggatgatatagctaagggatcatttgtgtgcatt
tatgctggtaaaatcctgactgatgatttcgctgacaaagaaggtctagagatgggtgac
gagtatttcgctaacctggaccacatcgagagcgtggagaacttcaaggaaggctacgag
agcgaggcgcactgctccgacagcgagggcagcggcgtggacgtgtccagaatgaaaatc
cagccgtccgctttagtctccagcagcgctgcgaggaaaaaagctcagagctccagctct
tcagatgacagcaatgacgaagaggagaaagattcaaaaagtgaagatgaaagcgacagc
tcagacgacacttttgtgaaggacaactactacacccctagctctgtgtggaggagttac
acgactcgtggtcaggccaagggcaacaaagaagggagtcaggacagtaaagatggactg
agtgtctcagccaaaggtcaggatgatgagaagccgccctctatgccagaggagacgggg
aaaagcaaagtggcttcctggttaacaagccagggtctgaagaaggaaactggagacaag
agtcaaataaagacagagcagtcaaagaaacaggacgtcatgactctatcggacagcgac
gatgttcaaaccattagctccggatctgaagacaacaaagagagggagaaagccactccg
gcttctgtatctggcgtgaccaagaagcaggtggcagtgaaatccacgcgaggcatcgcc
ctgaagaacagccacagtttgatggtgaaaccgtctgggggaggagtcgggcccagcgct
caggggagcaaacccggccaccaggggcagcctggaggaggggcagaaaacgctcccaaa
aacacccggctgttctttgacggcgaagagtcctgctacatcatcgatgccaagttggag
ggaaatctgggacgttacctcaatcacagctgcagtcctaacctgttcgtccagaacgtg
tttgttgacacacacgacttgagattcccctgggtggcattcttcgccagcaagcggatt
cgggccgggacagaactgacctgggattataactacgaggtgggaagcgttgaaggcaaa
gagctgctgtgctgctgcggatccacagagtgtcgtggacggctgctgtga
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integrated database retrieval system
