Xiphophorus hellerii (green swordtail): 116717450
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Entry
116717450 CDS
T07363
Symbol
znf407
Name
(RefSeq) zinc finger protein 407
KO
K26729
Zinc finger protein 407
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116717450 (znf407)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116717450 (znf407)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-Di19
zf-C2H2_REST
zf-C2H2_2
zf-C2H2_15
zf-C2H2_jaz
zf-met
Zf-C2H2_ZNF451_C
zf-C2H2_3rep
zf-BED
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
116717450
NCBI-ProteinID:
XP_032414743
LinkDB
All DBs
Position
3:25396639..25596281
Genome browser
AA seq
1452 aa
AA seq
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MEKNLELGEGDAESKSAENDFVRVQADDMEMEKTTGVSPGSTGELDEAEEERAERPLPDG
GREGGENVCKVCGFSTMYPRSLKTHYTRKHGKVIGKNPRPHEEKVNNLNASGVQEQATIK
TEEDDGEQNQSPDLDQEETNTAQERRVSKRTPKPKIIYSCNYCGHEFRDKAPLDVHIQRY
HAKDVPLTFEVEENVGESEEAAESCSTEKASPSKVAPKRVLSRFQLKCPICDFRVGSTAV
LERHARDKHPTLEWFRCKVCNFFAATSEWMSSHLSSDGHLEQQKVKKSSEASSFEQCVEK
VSRDCVGDDAVGGHLDQVVPGDDGTTLTEEQQKTDELSEAAESVLTEEEDEELEPPRKKR
GRPKQGSSTTCGYCGLVVSNATNLSVHVRRKHSKDYGYSCTLCNYSCVTKGDMDRHCFTK
KHVKRAQESSSKSPARADSSAPLLEPTSAPATATQPTDAKQEQDGELLGERKDEDQTESD
TSQQQSKYDSVNACSLCDFVAQSIPSLHLHVKRKHTKDFEYICLACSYYAVTSREMYRHA
STEKHKQKSQKYLEHQKSKEQRASEHPLKGTEINEPPGQNSSTGCEHPNPSDWSGSCYID
SPCVEMQDPAAPSVTTEIVRVVVGGTGGEDEMQVTTNTSSTDNEPQSTNQTAEMTVQQAS
AELQLPLDESAHEENQNLECTQAGEETSKEDVSVVDMQMSKAPPFDASIVSFKALAEQEV
TLAESMALEGEAPVISLTGGPISSIMSPSSTYVRKLKPKEVKVRDEAKGSSSRIRCEDCG
FMADGLSGLNVHISMKHPSKERHFHCLVCGKSFYTESNLHQHLSSAAHLRNEQNSVEELP
EGGASFKCVKCTDRFETEQDLFVHIKEKHEELLREVNKYVLEDTEQINREREENQGSVCK
YCGKVCKSSNSMAFLAHIRTHTGSKPFMCKICNFATAQLGDARNHVKRHLGMREYKCDIC
GWAFVMKKHLNTHLLGKHGVGQRKERKFECDLCDRSFSEKWALNNHMKLHNGEKPYKCIW
PSCHYAFLNLSAMKDHYRTHTGEKSYLCDLCGFAGGTRHALTKHRRQHTGERPFKCKLCN
FASTTQSHLSRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPKCTY
ATNSPMEFRNHLKDNHFDIENPDLAYLHAGIVSKSFECRLKGQGATFVEAESVESPEDRK
GSSEASGHEEAVQQVIIIQGYGEEDVAIDQALEESAAATLQTLAMAGQVAEVLHITEDGQ
VIASGREVASAGAHLAGGSTQYVVVESGDARKDLHAAAGQSHIVSESSTALDALLTAVSE
MGHQEKMQGEATVVHEVLAPEASTEAHAAVDVKQEEQEEVQVIQEAGHENMQEVLKLAAS
QMMKEGLTQVIVNDEGTHYIVTELEDCTLQVEEAVYGGAGPGDGEAQQAEHQAGEEMVVY
LDGASHNIVLEG
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaacctggaattaggagagggggatgctgagagcaaatcagctgaaaacgac
tttgtgagggtgcaggcagacgatatggagatggagaaaaccacaggggtctcccctggt
agcactggtgaactcgatgaggcagaggaagaacgtgccgagaggccattgccagacggt
ggacgcgagggcggggagaacgtttgcaaagtttgtgggttctcaaccatgtacccgaga
tcactgaaaactcattatacaagaaaacatgggaaagtcattggaaaaaatcctcgacct
catgaagaaaaggtaaataatcttaatgctagtggagtccaagagcaagccaccataaaa
accgaggaagacgatggtgaacaaaaccagagtccagatttagaccaagaagagactaac
acggctcaggagagaagggtcagcaagcgaaccccaaaaccaaagatcatttattcctgc
aactactgtggacatgaatttagggacaaggctcctcttgatgtccacattcagagatac
catgccaaagatgtccctttaacttttgaggtggaggagaacgtgggcgaatcggaggaa
gccgcggagagctgcagcactgaaaaggcttcaccatcaaaagtggcaccaaagcgtgtt
ctcagcaggttccagctgaaatgtccaatctgtgattttagggtgggtagcactgcagtg
ctggaaaggcacgctcgcgataaacaccccaccctagagtggttccgctgcaaagtttgc
aacttctttgcagcgacttcagagtggatgagttctcacctgtcgtcggatggccatttg
gagcaacagaaagtaaagaaaagctcagaagcttcttcatttgaacagtgcgttgagaag
gttagcagagactgtgtgggagatgatgcagttgggggtcacctcgatcaggtggttcct
ggagatgatgggactactttgaccgaagaacaacagaaaactgatgagctgtcagaggca
gccgagtctgtgttgactgaggaagaagatgaagagcttgaacctccaagaaagaaaaga
ggaagaccaaaacaagggtcttctactacttgtggatactgtggcttggttgtgtccaat
gccactaatctcagcgttcatgttcgccgcaaacacagcaaagattatggttacagctgc
actttgtgcaactacagctgtgttaccaagggagatatggatcgtcactgttttactaag
aaacatgtgaaaagagcacaggagagttcaagtaagagccctgcgagggccgactccagt
gcgccgttgcttgagccaaccagcgcaccagctactgccacacagcctactgacgcaaag
caagaacaggatggggaacttcttggagaacgcaaagatgaagaccaaactgagtctgac
acaagccagcaacaaagcaagtatgactctgttaatgcttgcagtctttgtgattttgtt
gcccagtcaatcccatccctccatctccatgtcaagagaaagcacaccaaagattttgag
tacatttgtctagcatgcagctactatgccgttactagtagggaaatgtatcgtcatgct
agcacagagaagcataagcaaaagagtcagaaatacctggaacatcaaaagagcaaagaa
caaagagcttcagaacatcctttaaaagggacagagatcaatgagcctcctgggcagaac
tccagcactggctgtgaacatccaaacccctcagattggtcgggatcttgttacattgac
agcccgtgtgtggaaatgcaagatccagctgcgccgtctgtcactacagagattgttcgt
gttgtggttggtggaactggaggtgaagatgaaatgcaagtgacaactaatacatcatcg
actgacaatgaaccacagtcaaccaaccagacagctgagatgactgtgcagcaggcttca
gccgaacttcagcttccattagatgagtctgcacatgaagagaatcagaatttagagtgt
acacaagcaggagaggagacttcaaaggaagatgtatcggttgttgatatgcaaatgtcc
aaagctcccccgtttgatgccagtattgtttccttcaaggcccttgcagagcaggaggta
acattggcagagagtatggcactggaaggagaggcccctgtcatatctttgactggaggg
ccaatatctagcatcatgtcccccagctccacatatgtgagaaagctcaaacccaaggag
gtgaaggttagggatgaagccaaaggcagcagctctcgcatacgctgcgaggactgcggc
ttcatggcggacggcctcagcggcctcaacgtccacatctcaatgaagcacccgtccaaa
gagaggcacttccactgcctggtgtgcggcaagtccttctacaccgagagcaacctgcac
cagcacctctccagcgccgcccatctccgcaacgagcagaacagcgtggaggagctgccc
gaggggggcgcgagcttcaagtgcgtgaaatgcaccgaccgcttcgagacggagcaggac
ctgtttgtccacatcaaggagaaacacgaggagctcctgcgggaggtcaacaagtatgtg
ctggaggacacggagcagatcaaccgcgagcgcgaggagaaccagggcagtgtatgcaaa
tactgtggcaaggtgtgcaagagcagcaactccatggccttcctggcacacattcgcaca
cacaccggatctaagcccttcatgtgtaagatctgcaactttgccactgctcagctggga
gacgcccggaaccacgtgaagaggcatctcgggatgcgagagtacaaatgtgacatttgt
ggatgggcctttgtgatgaagaaacacctcaatacccacctgctgggaaaacacggagtc
gggcagcgtaaagaaaggaagttcgagtgcgacctgtgcgaccgctccttcagcgaaaag
tgggccttgaacaatcacatgaaactgcacaacggggagaagccgtacaagtgcatctgg
ccgtcctgccactacgccttcctcaacctgtcggccatgaaggaccactacaggacgcac
accggagagaagtcctacctctgtgacctgtgtggcttcgcaggaggcacaagacacgcc
ctcaccaaacacagacgccaacacacaggagagagacccttcaagtgtaagctctgcaac
ttcgcctccaccacacagtcccacctgtcgcgccacaaacgtgttcacaccggagagaaa
ccgtaccgctgcccctggtgcgactacaggtccaactgtgctgagaacatccggaagcac
attctccatacggggaaacatgaaggagtgaagatgtacaactgccccaagtgtacctac
gccaccaactcccccatggagttccgtaaccacctgaaggacaatcacttcgacatcgag
aacccagaccttgcctaccttcatgcaggtattgtgtccaagtccttcgagtgccgtctg
aaaggccaaggagcaacatttgtggaggccgagtctgtggaatcgcctgaggacaggaaa
ggctcgtcggaggcatccggccacgaagaggccgtccagcaggtcatcatcatccaggga
tacggtgaggaggacgtggccatcgaccaggccctggaggagtcggccgccgccaccctg
cagacgctggccatggccggtcaagtggccgaagtgctccacatcacagaagacggacaa
gtgatagcctcgggcagggaggtggcctcggcaggcgcccacctggctggaggcagcacc
cagtacgtggtggtggagtccggggatgccaggaaggacttgcatgcggctgcgggtcag
agtcacatcgtttccgagtcgtccaccgctctggacgctctgctcaccgccgtcagcgaa
atgggccatcaggagaaaatgcaaggagaggcaaccgtcgttcacgaagtgttggccccc
gaagcctcgacggaggcccacgccgccgtggacgtgaagcaagaagagcaagaggaggtg
caggtcatccaggaggccggccacgaaaacatgcaggaggtgctgaagctcgccgcctcc
cagatgatgaaggaaggccttacccaggtcatcgtcaacgacgagggaacccattacatc
gtgaccgagctggaggactgcaccctgcaggtagaggaggcggtgtacggcggtgcgggc
cccggggacggcgaggcacagcaggcggagcatcaagcaggagaggagatggtggtctac
ctggacggagcttctcataacatcgtcctggaaggctga
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integrated database retrieval system
