Xiphophorus hellerii (green swordtail): 116718298
Help
Entry
116718298 CDS
T07363
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03320
PPAR signaling pathway
xhe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116718298 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
116718298 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116718298 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116718298 (nr1h3)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116718298 (nr1h3)
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
116718298 (nr1h3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
116718298
NCBI-ProteinID:
XP_032416001
LinkDB
All DBs
Position
4:complement(5944745..5961664)
Genome browser
AA seq
464 aa
AA seq
DB search
MSTLSVTDIPDVGHDESKVFDGASELQLDCLAEESGGNTTMKPGGLLSLTDLTQPDDFPV
ASHNGPSLADMSSTLPVEPSDIKLDPCAGDASGSVDGQPVKRKKGPAPKMLGNEVCSVCG
DKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAG
MLEQCVLSEEQIRLKKLKKQQEEETAHTSTVVTPTPLQEAPTLDPQQQEMIEKLVAMQKQ
CNKRSFLDRPKVTPWPQSQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTR
EDQIALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKDDFAKAGLQFEFINPIFEFS
KGMNDLHLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYIMIKRPNDHLM
FPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVNE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgctgtctgtgactgatatcccagatgttggtcatgatgagagtaaggtgttt
gacggggcctctgagctgcagctggactgcttggctgaggagagcggtggaaacaccaca
atgaagcccggcggcctgctgtcactgaccgacctcacccagccagatgacttcccagtc
gcctcccacaatggcccgtcgcttgccgacatgagcagcactctgccggtggagccaagt
gacatcaaactggatccgtgtgcaggtgacgcgtctggtagcgtagatgggcagccggtg
aagaggaaaaagggtcctgctccgaagatgctgggcaacgaggtgtgcagcgtctgtggc
gacaaggcttctggtttccactacaacgtgttgagctgcgagggctgcaagggattcttc
cgccgcagcgtcatcaaaagcgcccagtactcctgcaagaacaacggccgctgcgaaatg
gacatgtacatgcgccgcaagtgccagcaatgccggctgcgcaagtgtcgggaggcgggc
atgcttgagcagtgcgtgctttctgaggaacaaatccggttaaaaaagctgaaaaagcag
caggaggaggaaactgcacacacgtccacagtggtcacaccaacccctctgcaggaagca
cccactctcgacccacagcagcaggagatgatcgagaagctggtggccatgcagaaacaa
tgcaacaagaggtctttccttgaccgaccaaaagttacgccttggccccagagtcaagac
ttgcaaaaccgagaagtgcgacagcagaggttcgcccactttacagagctcgcaataatg
tccgttcaagagattgtggattttgcaaagcagcttcctggcttcctggagttgacaaga
gaagaccagatcgccttgctcaaaacctccaccattgagattatgctgttagagacgtcc
cggcgatacaatccagccattgacagcattacttttctgaaggatttcagctataataag
gatgattttgccaaagcagggcttcagtttgagttcattaaccccatattcgagttttca
aaaggaatgaacgacctgcacctcgatgaggccgaatacgctctgctcattgctatcaac
atcttttctgcagatcggccaaatgtgcaggatcacgatcttgttgagaggctgcagcaa
ccctatgtggatgctctgcgctcttacatcatgataaagagaccaaatgatcacctgatg
ttcccccgtatgctgatgaaactggtgagccttcgcacattgagcagtgtccactcggag
caggtttttgctctccgcctccaggacaaaaagcttcccccgctgctgtctgaaatctgg
gatgtcaatgagtga
DBGET
integrated database retrieval system