KEGG   Xiphophorus hellerii (green swordtail): 116719700
Entry
116719700         CDS       T07363                                 
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03082  ATP-dependent chromatin remodeling
xhe04145  Phagosome
xhe04210  Apoptosis
xhe04510  Focal adhesion
xhe04520  Adherens junction
xhe04530  Tight junction
xhe04810  Regulation of actin cytoskeleton
xhe04814  Motor proteins
xhe04820  Cytoskeleton in muscle cells
xhe05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116719700
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    116719700
  09143 Cell growth and death
   04210 Apoptosis
    116719700
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116719700
   04520 Adherens junction
    116719700
   04530 Tight junction
    116719700
  09142 Cell motility
   04814 Motor proteins
    116719700
   04820 Cytoskeleton in muscle cells
    116719700
   04810 Regulation of actin cytoskeleton
    116719700
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116719700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116719700
   03019 Messenger RNA biogenesis [BR:xhe03019]
    116719700
   03036 Chromosome and associated proteins [BR:xhe03036]
    116719700
   03029 Mitochondrial biogenesis [BR:xhe03029]
    116719700
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xhe04812]
    116719700
   04147 Exosome [BR:xhe04147]
    116719700
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     116719700
Messenger RNA biogenesis [BR:xhe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     116719700
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     116719700
    NuA4 complex
     116719700
  Chromatin remodeling factors
   BAF complex
    116719700
   PBAF complex
    116719700
   GBAF(ncBAF) complex
    116719700
   SWR1 complex
    116719700
Mitochondrial biogenesis [BR:xhe03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    116719700
Cytoskeleton proteins [BR:xhe04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     116719700
Exosome [BR:xhe04147]
 Exosomal proteins
  Proteins found in most exosomes
   116719700
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 116719700
NCBI-ProteinID: XP_032418200
LinkDB
Position
5:32193619..32196779
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagatgaaattgcagccctcgttgttgacaatggctctggaatgtgcaaagctggc
tttgcaggagatgatgctccacgtgccgtcttcccctccattgttggtcgccccaggcat
cagggtgtgatggttggaatgggccagaaggacagctatgttggtgatgaggcacagagc
aaaaggggaattctgaccctgaagtaccccattgagcatggcattgtgacaaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgcgagttgcacctgaggag
caccctgtgctgctcacagaggcccccctgaaccccaaagccaatagggagaagatgacc
cagatcatgtttgagacgttcaacacacctgccatgtatgtagccatccaggctgtgctg
tccctgtacgcctctggccgaaccactggtatcgtcatggactctggtgatggtgtgacc
cacacggtgcccatctatgaaggatatgctctgcctcatgccatcctgaggctggacctg
gctggcagagacctcacagactacctcatgaaaatcctgactgagaggggttatagcttc
acaaccacagctgagcgtgagattgtgcgtgacatcaaggagaagttgtgctatgttgca
ctggactttgagcaggaaatgggaactgctgcttcctcctcttcattggagaagagctat
gagctccccgacggccaggtcatcaccatcggaaacgagaggttccgttgcccagaggcc
cttttccagccttcattcctgggtatggaatcatgtggcattcatgagactaccttcaac
agcatcatgaagtgtgatgtggatattcgtaaggatctgtacgccaacaccgtgctgtct
ggtggtaccaccatgtaccctggcatcgctgaccgcatgcagaaggaaatcactgccttg
gcccccacaaccatgaagattaagatcatcgctcctccagagaggaaatactctgtgtgg
atcggaggctccatcctggcttccctgtctaccttccagcagatgtggatcagcaagcag
gagtatgatgagtctggccccagcatcgtccacaggaagtgcttctaa

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