Xiphophorus hellerii (green swordtail): 116719700
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Entry
116719700 CDS
T07363
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
xhe04145
Phagosome
xhe04210
Apoptosis
xhe04510
Focal adhesion
xhe04520
Adherens junction
xhe04530
Tight junction
xhe04810
Regulation of actin cytoskeleton
xhe04814
Motor proteins
xhe04820
Cytoskeleton in muscle cells
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116719700
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116719700
09143 Cell growth and death
04210 Apoptosis
116719700
09144 Cellular community - eukaryotes
04510 Focal adhesion
116719700
04520 Adherens junction
116719700
04530 Tight junction
116719700
09142 Cell motility
04814 Motor proteins
116719700
04820 Cytoskeleton in muscle cells
116719700
04810 Regulation of actin cytoskeleton
116719700
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116719700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116719700
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116719700
03036 Chromosome and associated proteins [BR:
xhe03036
]
116719700
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116719700
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116719700
04147 Exosome [BR:
xhe04147
]
116719700
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116719700
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
116719700
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
116719700
NuA4 complex
116719700
Chromatin remodeling factors
BAF complex
116719700
PBAF complex
116719700
GBAF(ncBAF) complex
116719700
SWR1 complex
116719700
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
116719700
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
116719700
Exosome [BR:
xhe04147
]
Exosomal proteins
Proteins found in most exosomes
116719700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
116719700
NCBI-ProteinID:
XP_032418200
LinkDB
All DBs
Position
5:32193619..32196779
Genome browser
AA seq
375 aa
AA seq
DB search
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaaattgcagccctcgttgttgacaatggctctggaatgtgcaaagctggc
tttgcaggagatgatgctccacgtgccgtcttcccctccattgttggtcgccccaggcat
cagggtgtgatggttggaatgggccagaaggacagctatgttggtgatgaggcacagagc
aaaaggggaattctgaccctgaagtaccccattgagcatggcattgtgacaaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgcgagttgcacctgaggag
caccctgtgctgctcacagaggcccccctgaaccccaaagccaatagggagaagatgacc
cagatcatgtttgagacgttcaacacacctgccatgtatgtagccatccaggctgtgctg
tccctgtacgcctctggccgaaccactggtatcgtcatggactctggtgatggtgtgacc
cacacggtgcccatctatgaaggatatgctctgcctcatgccatcctgaggctggacctg
gctggcagagacctcacagactacctcatgaaaatcctgactgagaggggttatagcttc
acaaccacagctgagcgtgagattgtgcgtgacatcaaggagaagttgtgctatgttgca
ctggactttgagcaggaaatgggaactgctgcttcctcctcttcattggagaagagctat
gagctccccgacggccaggtcatcaccatcggaaacgagaggttccgttgcccagaggcc
cttttccagccttcattcctgggtatggaatcatgtggcattcatgagactaccttcaac
agcatcatgaagtgtgatgtggatattcgtaaggatctgtacgccaacaccgtgctgtct
ggtggtaccaccatgtaccctggcatcgctgaccgcatgcagaaggaaatcactgccttg
gcccccacaaccatgaagattaagatcatcgctcctccagagaggaaatactctgtgtgg
atcggaggctccatcctggcttccctgtctaccttccagcagatgtggatcagcaagcag
gagtatgatgagtctggccccagcatcgtccacaggaagtgcttctaa
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