Xiphophorus hellerii (green swordtail): 116719928
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Entry
116719928 CDS
T07363
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116719928 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116719928 (nthl1)
Enzymes [BR:
xhe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
116719928 (nthl1)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116719928 (nthl1)
Prokaryotic type
116719928 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
116719928
NCBI-ProteinID:
XP_032418654
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Position
5:complement(22626468..22629731)
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AA seq
400 aa
AA seq
DB search
MLRNVRCETRRLCYVVQILKMSSPYFMQSSAVLTRSSSHGAGGGSAASLRSKLSSRQGDV
DAVPARKVEAEEATVSEEKPSLTPSSSDGCQERLRPITEIEASSLLPRGRRRRQVKVEYD
GDDGASRVKTEHWEPPDWMKQLGFIREMRSCRDAPVDNMGAEKCYDTQAPAHVRRFQVLV
SLMLSSQTKDQVTGAAMQRLRAHGCTAENIVATDNKKLGELIYPVGFWRNKVKFLKQTSA
MLVTEFGGDIPNSVEGLVRLPGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISNRLGWLKK
PTKNPEDTRKALEEWLPRELWSEINWLLVGFGQQVCLPVSPLCSVCLNQYSCPSAHKCSP
AKRPKHGSPRSPGPSRKFKVESEQESDARSKSAANLKPPD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtaatgtccgctgtgagacgaggagactgtgctatgtagttcagattttgaaa
atgagttctccgtatttcatgcaaagcagcgctgttctcacccggagcagcagtcacggt
gcgggcggtggatccgcggcctctttgaggtccaaactcagcagcagacagggggatgtg
gacgccgttcctgcacggaaggtggaggcggaggaggcgacagtgtccgaagagaagccc
tctttgaccccttcatccagcgacggctgccaggaacgcctccggcctatcacagagatt
gaagcgtcatcgctgcttcctcgcggtcgcaggaggagacaggttaaggtggagtatgac
ggagacgatggcgcctcccgggtaaagacggagcactgggagcctccggactggatgaaa
cagttgggtttcatccgtgaaatgaggagctgtcgagacgccccagtggacaacatggga
gctgagaaatgctacgacacacaagcccccgcacatgtgaggcgtttccaggtgttggtg
tcgctcatgctgtccagccagacaaaggaccaggtgacgggcgcagcgatgcagagactt
cgggcgcatggctgcactgcagagaatatagtcgccaccgacaacaaaaagctgggagag
ctcatctatcccgtcggcttctggaggaacaaggtaaagtttctgaagcagacgtcggcc
atgctggtgacagagttcgggggagatatcccgaacagcgtggagggtctggttcgcctg
ccgggagtcggacctaagatggcccacctggctatggacattgcctgggaccaagtgtct
ggcataggagtggacacacacgtgcatcgcatctccaacaggctgggctggctcaagaaa
ccaaccaagaacccagaagacacacgcaaggccctggaggagtggttgccaagggagttg
tggagcgagatcaactggctgctggttgggtttggacagcaggtttgtcttccagttagc
ccgctctgctccgtgtgtctgaaccagtacagctgtccatctgcacacaaatgttctccc
gcaaaaagacccaaacacggatcaccacgctctccaggtccatcgcgcaaatttaaggtc
gaatctgaacaggaaagtgatgccagaagtaaatcggcagcaaacctgaagccaccagac
taa
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