Xiphophorus hellerii (green swordtail): 116720116
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Entry
116720116 CDS
T07363
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116720116 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116720116 (psen2)
Peptidases and inhibitors [BR:
xhe01002
]
Aspartic peptidases
Family A22: presenilin family
116720116 (psen2)
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GFIT
Motif
Pfam:
Presenilin
Trypan_PARP
DUF3377
Motif
Other DBs
NCBI-GeneID:
116720116
NCBI-ProteinID:
XP_032419099
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Position
5:complement(361900..366647)
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AA seq
424 aa
AA seq
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MSVSDSDEELYNERTALVPAQNPAVPSYRPDPELSPTEDSDSKTAGRSGGRAGPDPGAEP
EDEEEEPLKYGAKHVIMLFVPVTLCMAVVVATIKSVSFYSEKTTQQLIYTPFSEDTPDVG
RRLLHSVLNTAIMISVIVVMTVLLVVLYKYRCYKFIHGWLILSSLMLLFWFSFMYLGEVF
RTYNVAVDYPTVAMVIWNFGAVGMLCIHWKGPLQLQQAYLILISALMALVFIKYLPEWST
WVILGAISVYDLVAVLSPKGPLRMLVETAQERNEPIFPALIYSSAMMWTVTMANPADGQR
SGTGSDEEAELNGGRAEPQSPRLRPVTEEELEEERGVKLGLGDFIFYSVLVGKAAATGGD
WNTTLACFVAILIGLCLTLLLLAIFRKALPALPISIAFGLIFYFSTDFLVQPFMDNLANH
QFYI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtcagacagtgatgaggagctctacaacgagcggaccgccctggttcccgcc
cagaaccctgcggttccgtcctaccgacctgacccggagctcagccccaccgaggactcc
gacagtaaaacggccgggcggagcggcgggcgggccggtccggacccgggggcggagcct
gaggacgaggaggaggagcctctgaagtacggcgccaagcacgtcatcatgctgttcgtc
cccgtcacgctgtgcatggcggtggtggtcgccaccatcaagtccgtcagcttctactca
gagaagaccacccagcagctgatctacacgccattcagcgaggacacgcccgatgtgggc
cgccggctgctgcactccgtcctcaacaccgccatcatgatcagcgtcatcgtggtcatg
accgtcctcctggtggtgctgtacaagtaccgctgctacaagttcatccacggctggctc
atcctgtcctccctcatgctgctcttctggttcagcttcatgtacctgggcgaggtgttt
cggacctacaacgtggcggtggactatccaacggttgccatggtgatctggaacttcggc
gccgtgggcatgctgtgcatccactggaaggggccgctgcagctgcagcaggcctacctt
atcctcatcagcgcgctcatggcccttgtcttcatcaagtatctccccgagtggtccacc
tgggtcatcctaggcgccatctctgtctatgacctggtggctgtcctcagtccaaaggga
ccgctgcggatgctggtggaaacggctcaggagcgcaacgaacccatcttccccgccctc
atctactcctctgccatgatgtggacggtgacgatggcgaacccggccgatggccagcgc
tctggaacaggttccgatgaggaggcagagctaaatggcgggagggcggagcctcaaagc
ccacgtctgaggccggtcacagaagaggagctggaggaggaacgcggggtgaagcttggc
ctcggagacttcatcttctacagtgtcctggtgggaaaggctgcagcgaccggtggagac
tggaacaccaccctggcctgcttcgtggccatcctcatcggtctgtgcctcaccctgctg
ctcctggccatcttcaggaaggcgctgcccgcgctgcccatctccatcgccttcggtctc
atcttctacttctccactgacttcctggttcagcccttcatggacaatctggccaatcac
cagttctacatctga
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