Xiphophorus hellerii (green swordtail): 116720163
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Entry
116720163 CDS
T07363
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase manic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00514
Other types of O-glycan biosynthesis
xhe04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116720163
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116720163
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhe01003
]
116720163
Enzymes [BR:
xhe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
116720163
Glycosyltransferases [BR:
xhe01003
]
Glycan extension
O-Glycan
116720163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
116720163
NCBI-ProteinID:
XP_032419167
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Position
5:complement(28828984..28853220)
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AA seq
363 aa
AA seq
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MRNRWTRRSLVVLVFTFFIVVFVDFQLRTSSFTKSNVAHRPSAGARHGSIGQVPSAHSSV
HNSSSSINGGGRESKLSENNGGESVAERVHATQPKLRLDDIYVAVKTTARFHKTRLALLL
DTWISRTKAHTFIFTDKEDEELSSKGYNMVVTGCQSDHSQQALSCKMSVEYDGFMASNKR
WFCHVDDDNYVNPEGLLSLLSTFPQEGDIYVGKPSLDKPITAHELLDGNKTVNVRFWFAT
GGAGFCLSRRLAEKMSPWASGPHFERTSARIRLPDDCTVGFIVEKMLGVAMVHCPLFHSH
LENLLLISQRSLPQQVTLSYGMFENKMNSIEVKGSFSKEEDPSRFKTVHCILYPSTSWCP
PVT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatagatggacccgccggagcctggttgtcctggtttttacattcttcatcgtt
gtctttgtggatttccaattacgcaccagcagctttaccaaatcaaacgtggctcaccgc
ccgtcggccggcgcgcgccacggctccatcgggcaggttccctccgcacacagctcggtt
cataacagcagcagcagcatcaacggcggcggaagagaatccaaactcagtgaaaataac
ggaggagagtcggtggctgagcgcgtccacgccacgcagcccaaactcagactggatgac
atttacgtggctgtaaaaaccaccgcgaggttccacaagacgcgtctcgcgctccttttg
gacacttggatctcaaggaccaaggcgcacacattcattttcacagacaaagaggatgaa
gaattaagttcaaagggttataacatggtggtaacggggtgccaatcagatcacagccag
caggctctgtcctgcaagatgtccgtcgagtacgatggcttcatggcctcaaacaagagg
tggttttgccacgttgacgacgataactatgtgaaccccgagggtctcctctctctgctc
tcaacgttcccccaggagggcgatatctacgtgggcaagccgagtctggacaaacccatc
actgctcacgaactgctggacggaaataaaacggtgaacgtgcggttctggttcgccacg
ggaggtgccgggttctgtctgagtcgaaggctggcagaaaagatgtctccttgggccagc
ggcccgcactttgagcggacatcggccagaatccgtctcccggacgactgcaccgtgggc
tttatcgtcgagaagatgctgggcgtcgccatggtccactgtcctttgttccactcgcat
ttagaaaacctgcttctaataagtcaaagaagcctcccgcagcaggtaaccctgagctat
gggatgtttgagaataagatgaacagcatcgaggtaaagggaagcttttctaaggaggag
gacccctccaggtttaaaactgtccactgcatcctgtatccttccaccagctggtgtcct
ccggtcacttga
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