Xiphophorus hellerii (green swordtail): 116721842
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Entry
116721842 CDS
T07363
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116721842
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
116721842
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
Atx10homo_assoc
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
116721842
NCBI-ProteinID:
XP_032421733
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All DBs
Position
1:complement(17354040..17371935)
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AA seq
697 aa
AA seq
DB search
MMGLRSTTDTGSPDTSLVTPSDKDLSSGQQRVLNQVNTIKRSKSKYKNGTTSPTSPAPQT
LKTSDFGMFKYRAASTYSRANSSGSASFHNKKSRSLTTKSMKGRLVNSNMEQVNTSSWTK
SPNGLKPSRSDPVLTSASCLAPARSMKAKGQISSSQIQVTKESRSIINGPTFTESQTRIF
RSPSTQSQTDGKLGTIRVSKIEQSPMVNSTGYMQDNITLKEAVDYLSSSNESYQQHGANY
IQHVSYSEDSAKAEVFELNGIPPLVNMLDSSNSSLQKAASGALRNLVFKNMDNKIEVQKY
GGIAKVLNQMKNTKSTETQRQLAGLLWNLSSAEVLKNELISTALIALTKNVVVPFSIPKD
NPECVDPEVFYFATGCLRNLSSGSAQDREKMRTCENLIEALVTYISSCEKEGKSDEKPVE
NCMCTLHNLTYQLWQECPEASFSTEAQSEGRKSPTVGCFSPRSRKAKDEIFSNPPQVLAE
DSNKIALASSKVEWLYNSKATDVYVSLLKSSENNATKEASCGAMQNLTASKEKGSVAVSE
HLFKQLADNFLLSSLLRSNATQKTYASLLDNMSRKPTLLSQMAPKILPELGKVLSDDAWQ
EEAHPDTVATVCNVLHRLLLVDRDISKKTMSAKVIIGLLGISERDPEDSGSLAASKLLHN
LWTDKFLRSTIKHLKFDKFKFVNPKTIAAATESTPDE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgatgggactgcgatcgaccacggacaccgggagcccggacacctcgctcgtgacgccg
tccgacaaggacctgagctcgggacagcaacgcgtgctgaaccaagtcaacaccattaag
aggagcaaatcgaagtacaagaacggcacgacgagtcccacaagccctgctccacagact
ttaaaaacctctgactttggaatgttcaagtatagggcagctagcacctacagccgcgcc
aactccagcgggtcagcctctttccacaataagaagagtcgaagtctaacaactaaaagt
atgaagggaagattagtgaactccaacatggaacaagtcaacacctcatcctggacaaaa
agccccaatgggctgaaacccagtcggagtgaccccgttttgacttcagcttcttgtctt
gctccagcacgtagtatgaaagccaaagggcagatcagctcaagccaaattcaagttact
aaagagtcccgttcaataattaatggcccgactttcactgagagtcaaacacgcattttt
cggtcaccttccacccagtctcaaaccgatggcaagttgggcaccattagggtgtccaaa
atcgagcagtcacccatggtgaactctacaggatacatgcaagataatataaccctaaaa
gaggccgtggattacctgtcgagctctaatgagagctaccagcaacatggggccaactat
atccaacacgtcagctacagtgaagattcagccaaagcagaggtattcgagcttaatgga
attccacctttggtgaacatgctggacagcagcaactcaagcttacaaaaggccgcttct
ggtgctctgagaaatcttgtcttcaagaacatggataacaagatcgaagttcagaaatac
ggtggcatagctaaggtcctgaaccaaatgaagaacacaaagtctactgaaacgcagaga
caactcgctggcctactctggaacctgtcttccgctgaagtactgaagaatgaactaatt
tcaacagcacttattgctctgactaagaatgtggtggtgccatttagcatcccaaaggat
aacccagaatgtgtagatccagaagttttctattttgccaccggctgcttgaggaaccta
agcagcggctcagcacaggacagggaaaaaatgcgaacatgtgaaaacctcattgaggcc
ctggtgacatacatttcatcatgtgagaaagaggggaaatctgatgaaaagcctgtggag
aactgtatgtgtactctccataacctgacataccaactatggcaagagtgtccagaggct
tcattctcaacagaggctcaatctgagggtaggaaaagccccacagttggatgcttcagt
cctagaagcagaaaagctaaagatgagattttctcaaacccaccgcaagtcttggcagaa
gacagcaataagatagccctggcatcatcaaaggtggagtggttgtacaattcaaaagcc
acagatgtgtatgtttcactgctcaagtcgtccgaaaacaatgccactaaggaggccagc
tgtggtgccatgcagaacctcactgcgagcaaagaaaaggggtctgtagctgtgagtgag
catttgttcaagcaacttgcggacaattttctgctgtccagtctattgcggtccaacgct
actcaaaagacgtatgcctctcttctggataacatgtctcgcaaacccactttactatcc
cagatggcaccgaagattttgcctgaacttgggaaggttttgtctgacgacgcttggcaa
gaggaagctcatcctgacactgttgcaactgtttgcaatgtgttacatagactgctgctg
gtagaccgggacatcagcaagaagaccatgagtgcaaaagtgattataggactgctgggg
ataagtgagagagatcctgaagacagtggatcccttgcagcctcaaaactgctacacaac
ttgtggacagataagtttctgagaagcaccataaaacatctgaaatttgacaaattcaaa
tttgttaatccaaaaaccatagcagctgccacggagtccacgcccgatgaatga
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