Xiphophorus hellerii (green swordtail): 116722020
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Entry
116722020 CDS
T07363
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecule (CAM) interaction
xhe04517
IgSF CAM signaling
xhe04520
Adherens junction
xhe04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116722020
04517 IgSF CAM signaling
116722020
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116722020
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
116722020
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116722020
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116722020
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116722020
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116722020
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Type II RPTP family
116722020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_ROS1
Fn3_VIN3
Ig_2
Interfer-bind
fn3_2
ig
CRLF2-like_D2
Fn3_PBP1
fn3_SORL1
Ig_VEGFR-1-like_5th
Tc-R-P
PTP-SAK
DSPc
V-set
C2-set_2
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
116722020
NCBI-ProteinID:
XP_032421992
LinkDB
All DBs
Position
6:complement(21581152..21765757)
Genome browser
AA seq
1910 aa
AA seq
DB search
MVPNVHLAGPLRPRGALLLLLLLGSWVISSLADSKPSFIKTPEDQTGISGGVASFVCRST
GEPRPRITWMKKGKKVSSQRFEVIEFDDGASSVLRIQPLRTHRDEAIYECTATNSVGEIN
ANAKLTVLEENQIPPGFPTIDMGPQLKVVEKTRTATMLCAAGGNPDPEISWYKDMLPVDI
NSSNGRIKQLRSGGTPIRGALQIENSDESDQGKYECVAMNDAGTRYSAPANLYVRVRRVP
PRFSIPPNNQEVMPGGSVNLTCVAVGSPMPFVKWTMGQVELTKEEEMPLGRNVLEVTSIR
ESANYTCVAISSLGMIEATAQVTVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSYYM
IQYRAKSSDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAINNIGRGPPSDPVETRTGEQ
APSSPPLHVQARMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDMTAPLSAWQKHNTDDSS
LTTISGLTPDITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDTRISLT
WLWPVQDQITKYELQYWEAGSDSKKHVTFGPAGSHSVDGLKPDTMYYFSLAARSEMGLGV
YTQPIQARTAQSTPSAPPQEVHVVSLTSTSLKVSWVAPPADSRHGAIVRYTVSYQAPAGE
NTERRDVSDIGADATSHVLVDLEKWTEYEVWVRAHTDVGPGPESAPVKMRTKEDVPGAPP
KKLEVEAINSTAIRVTWKPPIQVKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQW
NIEESTEHEAVIGGLLAETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMISTTM
GNTALIQWQPPKEMVGELMGYQLQYKRTDEETFTSLELSKTKDHHTVTELHKGATYIFRL
SARNRAGAGEAYVKEISTPEDLPTGFPLNLKVTGLTQSSTQLTWEPPNLKERNGKITYYR
VVYKDINNHQDNSSNTTETHLTIEGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTMSNDF
PTLNFGVKAVTKTSVLLTWDLPENYKSQAPFKILYNQQSVEVEGNQKRKLITHLQPDTDY
SFVLTSRGIIAGGLQQQVSIRTAPDLIKAKPVSQTPQDGKMTINLPKILADPNLKNGWFY
IVVVPQTQSMQRWKNPDEVDLEELLRSREGPVLRRRRHVESPRAYVAAKLTHLPPTFMLG
DGQDYMGFKNKPLTNMQEFQWFVVAVLRNEGTDGTANYMTFSSSPYSDPVQIPKQLSQIG
DQPEMLWVMGPVLAVVVIIIIVIAILLFKKKRASPLPKDEHSGGVKDSLLGNSSDPVEMR
RLNYQTPGMREHPPIPVIDLADHIERLKANDGLRFSQEYESIDPGQQFTWENSNMEVNKP
KNRYANVIAYDHSRVVLTSVDAVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRM
VWEQRSNTIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYSVRTFALYK
NSSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGC
FIVIDAMLERMKHEKTVDIYGHVTCMRAQRNYMVQTEDQYIFIHESLLEAATCGNTEVPA
RNLYAHIQKLTQPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPFE
STRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLSETTEDFWRMLWEHNSTIVVM
LTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQ
FQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLE
RMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5733 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacgttcacctggcagggcccctccggcccagaggggcgttgctgttgctg
cttctactcggctcctgggtgatctcctctctggcagacagcaagccgagttttatcaaa
acccccgaggaccagactggcatctcgggcggggttgcatcgtttgtgtgccggtccaca
ggagagccgaggccgaggatcacctggatgaagaagggcaagaaagtcagctcccagcgc
ttcgaggtgattgaattcgatgacggcgcgagctccgtgctgcggatccagcctctgcgc
acccacagagacgaagccatttacgagtgtaccgccactaacagcgttggcgagatcaac
gccaatgccaagctcacagtgctggaagagaaccagatcccgcccggcttccccaccatt
gacatggggcctcaactgaaagtggtggaaaagacccggaccgccacgatgctgtgcgcc
gcaggtgggaacccggacccggagatctcatggtacaaggacatgctccctgtagacatc
aacagcagcaacgggcgcatcaaacagctccgctcaggtggtacaccaattagaggagcg
ctgcaaattgagaacagcgacgagtcggaccaggggaaatacgaatgtgtagccatgaac
gacgccggcactcgctactctgctcctgccaatctctacgtcagagtgcgaagagtccca
cctagattctctattccacccaacaaccaagaggtgatgccgggcggcagcgtcaacctg
acgtgcgttgcggtgggctcaccgatgcccttcgtcaaatggaccatgggtcaggtggag
ctgaccaaggaggaggagatgccactgggccgcaacgtgctggaggtcaccagcatccga
gagtcggccaactacacctgtgtggccatctcttctctggggatgatcgaagccacggca
caggttaccgtcaaagccttaccgaaacccccgacctccctgactgtgacggagaccacc
gccaccagcgtgacgctaacgtgggactccggaaacccagaacccgtttcctactacatg
atccaataccgagccaagtcgtcggacaacggcttccaggaggtggagggtgtggcaacc
acacgctacagcatcggtggactcagcccgtactctgagtacgagttccgcgtcatggcc
atcaacaacatcggccgcgggccgcccagcgaccccgtggagacgcgcactggcgagcag
gcgccctcgtcgccgcccctccatgttcaggctcgcatgctgagcgccagcaccatgctg
gtccagtgggagccgccagaggagcccaacggacagataagaggctaccgggtttactac
agctccgacatgacggccccgctcagcgcctggcagaagcacaacacggacgacagcagc
ctgacaaccatctctggcctgacgcctgacatcacctacagcctcagggtgctgggcttc
acctccgtaggtgacggaccaccctctgacatcctgcaagtcaaaacacagcagggagtt
cccgcgcagccgtccagtttcgaggccgaagccgagctcgacacccggatctcgctgacg
tggctgtggcctgtgcaggaccaaatcaccaagtacgagctgcagtactgggaggccggc
tcagacagcaagaaacacgtgacgttcggcccggcgggctcccactctgtggatggttta
aagcctgacaccatgtactatttctccctggcagcccgctctgaaatgggtttgggtgtc
tacacccagcccatccaagcccgcactgctcagtccactccctccgctccacctcaggaa
gttcacgtggtcagcctgacctccacaagcctcaaggtgagttgggtggcgccgcctgcc
gacagccgccacggtgccatcgtgcgctacacagtcagctaccaggctccggcgggagag
aacacggagcggcgcgatgtgtccgacatcggtgcagacgccaccagccatgtgctggta
gacctggagaagtggactgagtatgaggtgtgggtgagggcgcacactgatgtgggccca
ggccctgaaagtgccccggtcaagatgagaaccaaggaggatgtgcccggagcccctccc
aagaagctggaggttgaggccataaactccaccgccatccgcgttacttggaagcctcct
atacaggtgaagcagcatggacaaatcaggggctaccaagtcatcttttcccgactggaa
aacggcgaaccacgaggccagccgaacatcatggatgttgctttgccagaggcgcagtgg
aatattgaagagtccaccgagcatgaagctgttattggtggactgctggctgaaacgacc
tactccgtcactgtggctgcttacaccaccaagggcgacggagctcggagcaaagctaag
gtcgtcaccacgactggagcagtgccaggcaaacccactatgatgatcagcaccaccatg
ggaaacacggcactcatccagtggcagccgcctaaggaaatggtgggtgagctgatgggc
taccagctgcagtacaagcgcaccgacgaagagaccttcacctcactggagctgagcaaa
actaaagaccaccacaccgtcaccgagctgcacaaaggagcaacctacatcttccggctc
agcgcccggaaccgcgccggcgccggtgaggcttatgtgaaggagatcagcacgcctgaa
gacctgcccacaggcttcccgctcaacctcaaggtgacgggtctcacccagtcgagcacg
cagctcacctgggagcctccgaacctgaaggaacggaacggcaagataacttactacagg
gtggtgtacaaagacataaacaatcaccaagacaacagcagcaacaccacggaaacacac
ttgaccatcgagggactgaacccagacaccacctatgacatccgcgttcaggctttcacc
agcaaggggggcggccctctgagccccagcatccagagcaggaccatgtcgaacgatttc
ccaacccttaactttggtgtcaaggcagtcacaaaaacctctgtgttactcacctgggac
ctgcccgaaaactacaaatcccaggctccattcaagatcttgtacaaccaacagagtgtg
gaggtggagggaaaccaaaagaggaagctgatcacacatctgcagccagacaccgactac
tcgtttgtgctcacaagcaggggcatcattgccggcggtctccagcagcaggtgtccatc
cgcacggcccctgacctgattaaagccaaacccgtctcacaaacgcctcaggatggcaaa
atgaccatcaacttgccaaaaatccttgctgatccaaatcttaaaaacggatggttttac
atcgtggtggtgccacaaacccaatcgatgcagcggtggaagaacccagacgaggtggac
ctggaagagctgctcaggtccagagaaggtccggtgctgaggcgcagacgccacgtggag
tcccccagggcatatgttgcagccaaactgactcatctgccgccaacctttatgctgggt
gatggccaggactacatgggtttcaaaaacaagcccctaactaacatgcaggagttccaa
tggtttgttgttgcggtactacgaaacgaggggacggatggcacagctaattatatgacc
ttttcgtccagcccctactctgacccagtccagatcccaaagcagttgtcccaaattggg
gatcagcctgagatgttgtgggtcatgggccccgtgctggcggtggtcgtcatcatcatc
atcgtcatcgccatccttctgtttaaaaaaaagcgggcgtcacctttaccgaaagatgag
cactcaggcggcgtgaaggactcgctgctgggcaactcctccgaccccgtagagatgaga
cgactcaactaccaaaccccaggaatgagggaacatccaccaattcctgtcattgacctg
gctgaccacatagagagacttaaggccaacgacggcctccgcttctcccaggagtatgag
tccatcgatccgggccagcagtttacctgggagaactccaacatggaagtgaacaagcca
aagaatcgctatgcaaacgtcatcgcttatgaccactccagagtggtcctcacctctgtg
gatgctgttccaggcagcgactacatcaacgccaactacattgacggctacaggaagcag
aacgcctacatcgccactcaggggcctctgccggagacactgagcgacttctggagaatg
gtgtgggagcagaggtccaacaccatcgtcatgatgaccagactggaggagaagtcgagg
gtgaagtgtgaccagtactggccgtcacgaggaacagagacgtacgggatgattcaggtc
acgatgctggacactgtggagctggcaacttacagcgtccgaacctttgccctctacaag
aacagctccagcgagaagagagaggtgaggcagttccagttcatggcctggcctgaccac
ggcgtgcccgagtatcccacacccatcctggccttcctacggcgagtaaaggcctgcaat
cctccagacgccggacccatggtggtccactgcagtgcgggcgttggtaggaccggctgc
ttcatcgtgatcgacgccatgttggagcgcatgaagcacgagaagactgtggacatctac
ggccatgtgacgtgcatgcgtgcccagaggaactacatggtccagaccgaggaccagtac
atcttcatccacgaatccctcctggaggccgccacctgcggcaacacggaggtgccggct
cgcaacctgtacgcccacatccagaagctcacccagccgccgcccggggagacggtcacc
gccatggagctggagttcaagagactggccaactccaaagcccacacatcacgcttcatc
agcgccaacttgccctgcaacaagttcaagaaccggctggtcaacatcatgccttttgag
tctacccgtgtctgcctgcagcccatccgtggtgttgagggctccgactacatcaacgcc
agcttcattgatggctacagacagcagaaagcctacatcgccacacagggacccctgagt
gagaccaccgaggatttctggaggatgctgtgggagcacaactccaccatcgtggtcatg
ctcaccaagctacgagaaatgggccgggagaagtgtcatcagtactggccagcagagcgt
tccgccaggtaccagtactttgtggtggatccaatggctgagtacaatatgcctcagtac
atcctcagagagttcaaagtcacagatgccagggatggacaatccagaacaatccgccag
ttccagttcaccgactggcctgagcagggagtgccaaaaactggagagggcttcatcgat
ttcattggacaagtgcacaaaactaaggagcagtttggacaagatggaccaatcactgta
cactgcagtgctggggtaggcaggaccggagtcttcatcaccctcagcatcgtgctggag
cggatgaggtacgagggcgtggtggatctcttccagacggtgaagacgctccgcacccag
cggcccgccatggtgcagactgaggaccagtaccagctgtgctacagggcagcactggag
tacctggggagctttgaccactatgcaacgtaa
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integrated database retrieval system
