Xiphophorus hellerii (green swordtail): 116722892
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Entry
116722892 CDS
T07363
Symbol
gli2
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116722892 (gli2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116722892 (gli2)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
116722892 (gli2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
116722892
NCBI-ProteinID:
XP_032423169
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All DBs
Position
7:complement(32383849..32458611)
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AA seq
1456 aa
AA seq
DB search
MDKKEVKGSSPDGSSFSEIPKKPLPSGMSRGAHHLFPFHSPIPIDTRHHEGRYHYEPHPL
HAMHSPPGLTGSPVITDISLIRLSPHAAAGTGESPFSLPHPYVSPHMDQYLRSVHGSPTL
SMISAARGLSPAEVTHEHLKDRALFSFPPPPPGANPSEYYHLMASASQRSPYGDLLIQNG
AAAAVHLPDYIGPVDVSRFSSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPNSLVAY
INNSRSSSAASSSYGHLSVGGLSPTFSFPHSLNPVAYQQLLSQQRPLNAFGQTAPILQPP
PPSFPARQHPNAASSMSAEVNQSSGGDPAVSSTVNPLNTKRTKVKTEAEGPVPISPSAQD
HAAGVLDLSEDLDKDECKQEPEAVYETDCHWEGCGREYDTQDQLVHHINNDHIHGEKKEF
VCRWEDCSRELKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGE
KPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKILGCTKRYTDPSSLRKHVKTVHG
PDAHVTKKQRSDAPPRLPPRGNGENEAKHGPAGADGKTEANGASRGDERLQVKPIKMEDS
VTHQSSPGGQSSCSSEPSPLGSANNNDSGVEMAMYSGGSFGDLSAPDEGPTVNSTIPTGV
PQVGMGLQLRKSVAHGGAVTIKLENIKQERLKAVRETCSWATSRPQGMKLPPIPAAGSLL
ERSIMTSSLRTPYTGQPTGELTSCDITLLNQLNDRRDSTTSTISSAYTFSRRSSGISPCY
SSRRSSEASQFGTNRHNNISSADSYDPISTDLSRRSSEASHCGGGVASGGALPSLLSLTP
AQHYRLKAKYAAAIGGAPPTPLPNMDRMSLRTRMALYSDCQEGSTFLQPATGDAPRRCSD
ITYGSHSMMPHEVPTNLPRRASDPVCRPPLDPLSLPRVQRYSSMNNVNPMNALSSAERHQ
ALAMQGYTRSDGSLQRYPFAPRPPSISENIAMETMAVDGLMSSGEQSAEDEIVLPDDVVQ
YLRSQSSGPTSHSYNSQGYQASMAPPLHFHGQRRMAMVDATLAQSGHDISYQGGVNGSQQ
LVPAPRDNKNNMPVQWNEVSSGTMDTKLPKPQQHPFRSNLASAQQRHSSGVLHALSGNQQ
VVPISHNLSIQGYHSHQSPGNTSLQHHQQQRQCSFNEHMSHQQELSQEGRLRSLSGSSSI
TLNIAASSELQSFKTRAQVDGYCHGNQVNQEQNYSIPLKQQQYVIQNGARRMLQPQPPNE
PKSFPRQHSASAMTQPSPRLVELNPSNICSEASPKRQSQGLNHSSPVNQNSAVFYLAQIH
MFQPSSHSSDDDSMSPSANETTCSDMAAAASMASPGANQVSSSIIDSSTGRSRATEHTQI
DFDTMLDDGDHSSLMSGTLSPGLLQSLSQSSSRLTTPRNSITLASVPTGIGNMAIGDMNS
LLTALAEESKFLNFIS
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaggaggtcaaaggttctagtccggatgggagcagcttctccgagattccc
aagaaaccgttgcccagtggcatgagcagaggtgctcaccaccttttcccgttccacagc
cccatccccatcgacaccaggcaccatgagggccggtaccattacgagccacacccgctc
cacgccatgcacagccccccaggactgacaggaagtccagtcatcacagacatttctctg
attcgactctcgccacatgccgcggctgggaccggcgagtccccgttcagcctgccccat
ccatatgtcagccctcacatggaccagtacctccgctcagtccatggcagtcccaccctg
tccatgatctcagcggcacgaggactgagcccagctgaagtgacccacgagcatctgaag
gatcgggccctgttcagcttcccccctccaccgccgggggccaacccctcggagtactac
cacctgatggccagcgccagccagagaagcccctacggcgacctactgatccagaacggc
gcagccgcagcagttcatctgccggattacatcggccctgtggacgtgtcccgtttctcc
agcccaaggttgactcctcggctgaacaggaagagggcgctgtccatctccccgctgtcg
gacgccagcattgacctgcagaccatgattcgcacgtcgcccaactccttggtggcctac
atcaacaactcgcgctccagctcagcagccagcagctcctatggacacctgtctgtggga
ggactcagcccgaccttcagcttcccccactccctcaaccctgtggcctaccagcagctg
ctgtcccagcagagaccgctcaacgccttcggtcagacggcccccatcttgcagccacca
ccgccctctttccccgcccgccagcaccccaacgctgcgtcctccatgtctgcagaggtg
aaccagagctccggtggagatccggcggtcagcagcacagtcaatccgctgaacaccaag
aggaccaaggtgaagactgaagcagagggtccagttcccatttcaccgtccgctcaggac
cacgccgcaggagtcctggacctgagcgaagatctggacaaggacgagtgcaagcaggag
ccagaggccgtttacgagaccgactgccactgggagggctgcggcagggagtacgacacc
caggaccagcttgtccaccacatcaacaacgaccacatccacggagagaagaaggagttc
gtgtgccgctgggaggactgttcccgggagctgaagcccttcaaggcccagtacatgctg
gtggtccacatgaggagacacaccggcgagaagccgcacaaatgcacgtttgagggatgc
ttcaaggcttactctcgcctggagaacctgaagactcacctccggtcccacaccggtgag
aaaccgtatgtgtgtgagcacgaaggctgcaacaaggctttctccaacgcctcggacagg
gccaagcaccagaaccgcacacactccaatgagaaaccgtacgtctgtaaaatcctgggc
tgcaccaagcgctacaccgaccccagctccctcaggaagcacgtcaagacggttcacgga
cccgacgcccacgtcactaagaagcagcggagcgacgcaccacctagactgccccctaga
ggaaacggggagaacgaggcaaagcacggcccggcgggcgcagatgggaagacggaggcc
aacggtgcatccagaggagacgagcggctgcaggtcaaaccaatcaagatggaggactct
gtgacgcatcagtccagtcctggtggccagtcatcgtgcagcagcgagccgtcgcctctt
ggcagcgccaacaacaatgacagtggggtagagatggccatgtacagcgggggcagcttc
ggggacctcagcgcgccggacgagggtcccacagtcaactccacgatccccaccggggtg
ccgcaggtgggaatggggcttcagctgaggaaatcggtggctcacggaggagcggtcacg
atcaagctggagaacatcaagcaggagaggctgaaggcggtgcgggagacctgcagctgg
gctaccagcagaccacagggcatgaagcttcctcccatccctgcagctggttccttgctg
gagagatccatcatgacgagcagcctccgcactccgtacactggccaacccactggggag
ttgacctcctgcgacataacgctactgaaccagctcaacgaccgccgtgacagcaccacc
agcaccattagctcagcctacaccttcagtcgacgctcctccggaatctcgccctgctac
tctagccggcgctccagcgaggcatcccagtttggcactaaccgtcacaacaacatcagc
tcggctgactcgtatgacccgatctccaccgatctgtctaggcgctccagtgaggccagt
cattgtggtgggggtgtggctagtggaggagccctgcccagccttctgagtctaacccca
gcccagcattatcggctcaaagcgaagtacgctgccgctattggcggtgctccacctact
cctctccccaacatggatcgaatgagcctgaggacaaggatggctctgtacagtgactgt
caggaaggctccaccttcctccagccggccaccggcgatgcaccccggcggtgcagcgac
atcacctatggctcacacagcatgatgccccatgaagttccgaccaacctcccacgtcgg
gcaagtgaccccgtctgccgtccacccctagaccctctgtctcttccaagggttcagcgc
tacagcagcatgaacaatgtaaaccctatgaatgccctgtcatctgccgagcgccatcag
gcattggctatgcagggttacacacgctcggatgggagtctccagcgttacccgttcgcc
ccaagaccgccaagcatttctgagaacattgccatggagaccatggcagtcgacgggctg
atgagcagtggggagcagagtgcagaggatgagattgtgcttccagatgatgtggttcag
tacctgaggtctcagagttctggcccaacaagccacagctataacagtcagggctaccag
gccagcatggctccaccgctgcactttcatggccagaggaggatggccatggtggacgcc
accctggcacagtctggtcatgacatttcctaccaggggggtgtcaatggttcccagcag
ctcgtcccagcaccacgagacaataagaacaacatgccagtgcagtggaatgaggtgagc
tccgggacgatggacaccaaactccccaaacctcagcagcatcccttcaggagcaacctg
gcttccgctcagcaaaggcacagctctggggtgctacatgccctgagtggcaaccagcag
gtcgtcccgataagccacaacctctctatacaggggtaccacagccaccagagcccgggg
aatacctccctccagcatcatcagcagcagagacaatgcagctttaatgagcacatgagt
catcagcaagagctcagtcaggaaggaaggcttcgttcgttatctggaagctctagcata
accctcaacattgcggctagctctgagctgcagagctttaagaccagagcccaggtggat
gggtactgtcatgggaaccaagtgaaccaggagcagaactacagcattcccctcaagcag
cagcagtatgtgatccagaacggagccagaaggatgttacaaccccagccacctaacgag
cccaagtccttccccaggcagcactcagcttctgccatgacacaaccaagccccaggcta
gttgaactgaaccccagtaacatctgctctgaggcaagcccaaagaggcagagccagggg
ctgaaccacagcagcccagtcaaccagaactctgctgtgttttacctggctcagattcac
atgtttcagccttcgtctcacagcagtgatgatgactcaatgtccccaagtgccaatgaa
accacctgtagcgacatggctgctgcagccagcatggcctctccaggagccaaccaggtc
tccagcagtatcattgactcgtccaccggccggtccagagccacagagcacactcagatc
gacttcgacaccatgctagatgacggagatcattccagcctgatgtctgggacgctgagt
ccagggcttctgcaaagcctgtctcagagctcctcccgtctcaccacgccacgcaattcc
atcaccctggcgtccgtcccaactgggattggcaacatggccattggagacatgaactcc
ttgcttacagctctggctgaagagagcaagttcctcaacttcatcagttga
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integrated database retrieval system
