Xiphophorus hellerii (green swordtail): 116722914
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Entry
116722914 CDS
T07363
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00260
Glycine, serine and threonine metabolism
xhe00270
Cysteine and methionine metabolism
xhe00670
One carbon pool by folate
xhe01100
Metabolic pathways
xhe01230
Biosynthesis of amino acids
Module
xhe_M00035
Methionine degradation
xhe_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
116722914
00270 Cysteine and methionine metabolism
116722914
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
116722914
Enzymes [BR:
xhe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
116722914
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
116722914
NCBI-ProteinID:
XP_032423217
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Position
7:13635153..13649120
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AA seq
587 aa
AA seq
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MPSVSGSKCLKDDQTPCTDEGNLLYAEKKCPVDGVVEIFPAAHKSSALRGDDCIDDEDKS
HQTSEENGEKEEKAEETAAQIKWIRPDLPSRCTWRPGAPMSESPHSQPPRIKPPRILPNI
LGHIGYTPMVRLNKIPKEFGLKCEMFAKCEFFNAGGSIKDRITMRMVEDAEEAGILKPGD
TIIEPTSGNTGIGLALIAAVKGYRCIIAMPEKMSMEKVDVLKALGAEIVRTPSSAAFDSP
ESHIRTAWRLKSQIPNSHILDQYRNASNPLAHYDTTAEEILEQCEGKLDMVVAGAGTGGT
LTGIARKLKEKCPNVKIIGVDPEGSMLVHSEEHQSAHFEVEGIGYDFIPMVLDRSLVHQW
YKASDKETFSMARMLIREEGLLCGGSSGSAMAAAVKMAQQLEEGQRCVVILPDSVRNYMS
KFLCDQWMCEKGFLESPNEIKPWWWNVTVHSLHLSTPLTFAPLMSCQKVIKILKEKAFDQ
APVISESGEIMGMVTLGTILSSVQDGKVKLSDPVSMVLFKDFRQVRLTDNLGKLSCILKT
QNFALVVDDQTQHDAAGSVCPRRNGFGVVTAIDLLTFITAHEGQDHP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgtgtctggaagcaaatgcttgaaagatgatcaaactccatgcacagatgaa
ggaaacttgctgtacgcagagaagaagtgtcccgtggacggagttgttgaaatttttcct
gctgcgcacaagtcgtctgcactcagaggagacgactgcatcgacgatgaggacaaatcc
caccaaacatctgaagaaaatggtgaaaaagaggaaaaggcagaagagacggctgctcag
ataaagtggattcgtcctgatttacccagcaggtgcacctggaggcccggcgcgccgatg
tcagagtcccctcacagccaaccaccacgcattaaaccgccaagaatcctccccaacatc
ctcggacacattggatacacacctatggtccgcctgaacaaaatcccaaaggagtttggg
ttaaagtgtgaaatgtttgccaagtgtgagtttttcaacgcaggaggcagcattaaagac
agaatcactatgcggatggtggaggacgccgaggaagccgggatcctcaaaccaggggac
acaatcattgagcccacctctggtaacacaggaatcggacttgctctcatagcggctgtg
aaaggctaccgctgcatcattgcaatgcctgagaagatgagtatggagaaagtagatgtg
ctgaaggctctcggggcagaaatagttcgcactccttcatctgcagcgtttgactcgccg
gagtctcacatacgaacagcttggagactaaagagtcagattcccaactcgcacatcctg
gaccagtatcgtaatgccagtaaccccctggctcactacgatacaacagctgaggaaata
ctggagcagtgtgaaggtaaactggacatggttgtagctggagcagggactggtggtaca
ctcacaggcatagctcgaaagctgaaggagaagtgccccaatgtcaagataatcggtgtt
gatcctgagggctctatgctggttcactcagaagagcatcaaagtgctcatttcgaggtt
gagggcattggatacgacttcatccccatggtgttggacagatctcttgtccaccagtgg
tacaaagcgagtgataaggagacatttagcatggcacgcatgctaataagagaggaaggc
ctcctctgtggtgggagttctggctcagcgatggcggcagcagtgaaaatggctcagcag
ctggaggagggacagcgctgcgtggtcatcctgccagactcggttcgcaactacatgtcg
aagttcctgtgcgatcagtggatgtgtgagaaaggtttcctggagagtccgaatgagatc
aagccctggtggtggaacgtgacagtccacagtttacacctctccactccgctcaccttt
gctccattaatgtcctgccaaaaagtcatcaagatcctgaaagagaaggcttttgaccag
gctccagtcatcagtgaatctggtgagatcatgggcatggtcactctgggaaccattctt
tccagtgtgcaggatggaaaagtcaaactatcggatcctgtgagcatggtgctcttcaag
gacttcagacaggtgcgcctgacggacaacctggggaagttatcctgcatcctcaaaacc
caaaactttgccctggtggtggatgatcagacccaacacgatgcggcgggttcagtttgt
ccgaggcggaacgggtttggcgttgtgacggcgatcgacctcctgaccttcatcaccgca
catgagggacaggatcacccataa
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