Xiphophorus hellerii (green swordtail): 116724337
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Entry
116724337 CDS
T07363
Symbol
cplane1
Name
(RefSeq) ciliogenesis and planar polarity effector 1 isoform X1
KO
K22859
protein JBTS17
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116724337 (cplane1)
Cilium and associated proteins [BR:
xhe03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
116724337 (cplane1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Joubert
Motif
Other DBs
NCBI-GeneID:
116724337
NCBI-ProteinID:
XP_032425851
LinkDB
All DBs
Position
8:15247468..15268203
Genome browser
AA seq
3256 aa
AA seq
DB search
MELKLEVVLSSSIKRKKPWPRFCWLGQEKESVFLLDDKRISEINMMSGRTKKKMPKLHPL
LSSVVKMTSSHNGMWLCGLLVSGELFLWNRDKDLLKTATAVPEVVQIINSAQGNSLKLCL
QVSCDGMRVLLAVITGQVFLWECTEGRDFPGMRDGAVKGRWAHLLPLEETILPSSNDKEA
SQHIIFVKTEIMADICLSAFVFTSGKQLVVTILKIQWSQGHMSVGSVGYSVQWASKTYPM
SHLCPSCQSVKSRGALVPAFSPDGRLLAIVLNQRKPKDTQVLFVSTQNFVSISSDLGGCG
SKKLDIPSKYVRSYWVSSVSWSAEGLFFACVLKRGSLLVLARLGGLLTLTSSGCNVDFGP
AHFLPLHPLVTYRPPLPAENREASLSSSTLSVRDLLRQRFSVTWHPRLPYLIVSDGYMAT
VMKVQDKLSPALFLKALLKETYADLEKTSCKLEKSQVHVKVWLESVSWFNSESSLEEVSA
AATCQPKASDSTNSAATDPTRLPLFLQDQQTLGGTKELLENMQDLFEEDSDLEGLTAGSH
GQEGGRLEFASMFDTLHAVDTHSEFGVDSNYKRQPAKKNRLCSELGKIQRKLLTAWAFAM
SVGDSVEHRVALLKHTLCCVVWFAALLHLVPPKEKNSPVFGRLLHLIKALLSFLSWDGSS
SGGQHCLGLMVEFSERIVRLLLTPQPDVRLTGHSLVSSQSLSRIMQILRLISDSLDQTYI
LEQKTFWSSEEEFLSSQLHLRCSDVHHVPLLQNVNADPSAFEHQALPVPQRPSSRLLGVW
QLVYDVAQRYAEELKRFKDCDGLEEEEQKLSVITSQIQTALQATGENLEEGRSLLSYQGE
HLFLCGLYSQSTQMLRLQICQEASKGGNRSVFQETRLCLALLYSLLSQYQLREAQEFGDH
MAQLILLRAGNRTDNFTCISDPLPCPWLPIDLPSDAACAVIQALGRFMAAYFTNQPLFIL
PAHNVAILPPLHLPLASSIGRLVSLFQEEVAKAVRQQHLSEVWTVDYAQDLLLLGGLLPE
AVWLASHLGDWKTAVTLSLAYTTYCAKHFDFNQIRRRDFLLPEELQPESIFQSELRDLLG
SKTNLREWTDKDGNDSFTDPMEGEDWEVLQASVHEILKASAMAGVNVMSFPLSTLLDKVK
DMCLLMPTLVPYEVYLPSPPLYCPQPSPNTQDQMCETGPFAELVCRHKVSGVLQRLLLLL
RSAHCCRPAAQWYISCLRRARHILHKIKKKYSYPSASQEEKTFPEGLMKLISRSGFFRRD
SNKDLDPDTIQTIICFRELCALCWMLHVRDQLSLHCRKYQAARQRDGEEAIPEDSPGNSA
NVTALHWACRLLPFSHFLSEEEVLQDIILSLLSELPPVSLVADTLVRAFPQEEESVRVSL
REKYKLLLQRLGQCNLLGEGGEDGEELMMIFIQDRKRHRRKHLARLQRHLAPPVLHLWEK
VEEQEDRGGRTDTATSGQLSLGTTVGTSTVTEFNQPVCSDADTAVNTSERISTKQHRAAV
SSSKKDRQKMTSKTDSVLKENTNISGEREKEQLSLPAVGSWEFELEDEEYLNFLELFLGY
VLEKDAAGGMDCGDEIPLLKGFCSQLREKELHSLTFDVVSSIHRRQRGGHLLERKHLGKP
PSVFRAGCCYKPMKQDVMLEPQTSSVWSETPVFRSSLSVERRTEKQKGLFGHWQQNVSSA
RLKEASVGSETSFVQNALLTENPSPGFSSSVEVVTDLQQGLDPELEARFPELGRLLEWMV
RWADRRILLGHHGNKKKDMADEQNDGVVIRVKTTAPAILTSLSLLEHRYAAQPQTEYYTS
HSQVPEMQWAFPPVLLSGVERKTERESSIDTGYPGSTNTPITGPDHNRQRGEATPSVSDE
QKELMFPADEVQLSFDSRQREPHSPQQTFDDLDVTPEREDRSGNSKSVEVLLSDSIQDTS
KDVCSPEMSLKLEDLDYSVSGSSSQYPPVNSEPAPSAIHPKPPPPAESSDLGGVLLPNPA
ADQPQISTAGAPPADFTTSTLPLITSTMRQRLGEDLFRLVQHINYMSLNEVLGATFSSFQ
MAQQNSLQLNMNLSSATRINPEPNAFPVQTSSTAVPQTQTCVPKPESNEPQLNPIGSYHF
AAQPVVQGTGLGLHHINQSQHTRTNSEMQPLSVQAESPQTQQTGKRRLIPSSDGLLATTE
RSHAVQHQPYDSSVHTDSAAQMSGLKLLKLHHFAMAEYSARHYAAQHAQAPHRANLKSNQ
PKATHYDQSTWKKKGGEQRNGFSVQTKHLLFNPAHDPTLRSSHSLMGPTGQFFGQAFPLH
PAAFPTQKPAPMQGLRLLQLRDTPPSSFNFPKLITAIPAVISTPMTEVPIIKLLHIESGP
KMVAPQNIPSKQKVRLTMELTATKKLRQDQLQIPRPDHSDEGIRNLTSTPCLSSAKRQKR
REEKRMNIEVSFRPNDSIIPTKEAAQVLESEDATVAEEIKPAQDVTGSSDHLLTGQRLLD
KVFSTSAELHAFASTRKRPPECHDAFTNTDPAATPTVENKSISVQTSTMTSSPKMQSPCN
FPEAPVQVENQQKSEMCLDLGGRQFISVLDLEDVRQSEDLLPCPDSEAADISSSPTSAQL
HVLATSVISSAAEAEAQFSVPVTNNLQEPRTTAEVLEVSPSFSSSQPARVAERIILQDDA
LEDSSASEICRVIKAQSLVPDRAPSAPATAWFSSRLSDMDSQLAALQNIADNLEKDFSNS
RMLVNTIEKLSLDRESDPKATMGVKKSVRLSVPLKAPDPDSLRALKKCDEIKEQEEELVL
HDDSGNSAIKPSRHYSTSPFSQSSGPSYLQAPGKKEHFHETYDISNEGADGTLSQTGLSD
TMEILDDLVKEGYLSPSDWDLDRSQTSHQNRRQDQREHTWTLEKKKLPEEERKELEGAVR
RQDQREHSWALQKRMHPAEERKELEGAVRRQDQREHSWALQKRMHPAEERKELEGAVRRQ
DQREHSWALEKSTHPEEERKELRIWMRRKQRERLTAYKKHRQSLRDRERKPFCGSSVEHF
PNRKTESIWGSREEKEKLMLLNQYFRRTEEACQLANDFLTSRVTGPSSSQTCEGPFLYSP
WLNSDPPLGHPFRPFNVSATDKKSPTSQTGSFPSQLRYSAESEYSYDLRRRLSLRRPVIF
NPADQLSQVTRGGMLSNIKSQSKLYAASQSQAQQVGLRKKTEFNNSFSRGAALQRGNLKE
HRQVKEPEVRKHSEFTRPKAVEDYTSVTGILHGEDGAVADGVSEMDWLDNLSDSAGSSLS
RIDWTAIERMVAEEDG
NT seq
9771 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagttggaggttgttttgtcatctagcatcaaacggaagaaaccgtggccg
cgattctgctggcttggacaggaaaaggagtctgttttcctgttagatgacaaacggatc
agtgagatcaacatgatgtctggtcgtaccaagaaaaagatgcctaaactacatcctttg
ctcagcagtgtggtgaaaatgacttcttctcacaatgggatgtggctgtgtggacttctg
gtgtcaggagaattgtttttgtggaacagagataaagatttactgaagactgcaacagca
gtgccagaagtagttcagataatcaactctgctcaaggaaattctctaaagttgtgtctt
caggtttcatgcgatgggatgagggttcttctggctgtcattactgggcaggtgttcctg
tgggagtgcacagaggggagggattttccaggcatgcgagatggcgctgtcaaagggcgg
tgggctcatttactgccgcttgaagaaaccattttgccgtcttcaaatgataaagaagca
tcccagcacatcatctttgtaaagacagagattatggctgacatttgcttatcagcattt
gttttcacctctggaaagcagcttgttgtcactattctaaaaattcagtggagccaaggt
catatgagcgtgggttctgttggttacagtgtacagtgggctagtaagacatatcccatg
tctcatctgtgcccatcctgccagtcagtgaagtccagaggggccttggtgccagcgttt
tctccagatggacgcctgttggccatcgtactgaaccagaggaagccaaaggacacacag
gtcctttttgtgagcacacagaattttgtttcaatctcaagtgacctgggaggatgtgga
agtaagaagctggacatcccatcaaaatatgtcaggtcctactgggtcagcagtgtcagc
tggtcagcagaaggcctgttctttgcctgcgtcttgaaaaggggatccctcttggtgttg
gctcgccttggcgggcttctcaccctgacgagctctggttgcaatgtggattttggtcct
gcgcacttcctgcccctgcatccgctggtcacttaccgaccaccgctgcctgcagagaat
agagaagcttctctttccagctccactttgtctgtgcgtgacctcctgaggcagcggttt
tctgtcacctggcatccgcggcttccatatctcattgtgtccgatggctacatggctaca
gttatgaaggtgcaggacaaactttcgcctgccctgttcctgaaggcacttctaaaagaa
acctatgcagatcttgagaaaaccagctgcaaattagaaaaatcccaggttcatgtgaag
gtttggctagagtctgtgtcttggtttaattcagaaagcagccttgaggaggtcagtgct
gctgctacatgtcagcccaaagcgtcagactccactaattcagcggcaacagatccaacc
aggctgccgcttttccttcaggaccagcagacactgggtggcaccaaggagcttcttgag
aacatgcaggatctctttgaagaagactctgatttagaaggtcttactgctggttctcat
gggcaggagggaggccgtttggagttcgcctccatgtttgacactctccatgctgtggac
actcacagtgaatttggagttgattcaaattacaagagacaaccagcgaagaagaatcgt
ctttgctctgagctggggaagattcagaggaagcttctcactgcttgggcttttgccatg
tcagtaggagattcagttgaacacagagttgctcttctgaagcatacactttgctgcgtg
gtttggtttgccgctttgctccacttggtccccccaaaagaaaaaaatagccctgttttt
ggaaggttgctccacctcataaaagctctcctttcgttcctttcttgggacggctcttcc
tcaggtggacagcactgcttgggactgatggtggagttcagtgaacggatagtgcgcctt
ctgctgacccctcagcccgatgtccgtctgactggacactcccttgtatcatctcaaagt
ttgtccagaataatgcagatcttacgcctgatctcagattctcttgaccagacttatatc
ttggagcagaaaactttctggtcttctgaggaggagtttttatcttctcagctgcatctg
aggtgttcagatgttcaccatgttcctctgctgcagaatgtgaatgcagacccatctgcc
tttgaacatcaggcattaccagttcctcagcggccttcaagcagattgttgggagtatgg
cagcttgtgtatgatgtagctcagcggtatgcagaggagctgaagaggtttaaagactgt
gatggtttggaagaagaggagcaaaagctgtctgtcatcacatcccagatccagactgct
ctgcaggcaacaggagaaaatctggaagagggtagatcactgctgagttaccaaggtgag
caccttttcctctgtggcttgtactctcaaagtacccagatgttacggttacagatctgt
caagaggccagtaaaggcggcaaccgtagtgtcttccaggagacgcgcctttgtctggcg
ctcctgtatagtctgttatctcagtaccagctcagggaagcccaggagtttggggaccac
atggcccaactgattttgttaagagctggaaaccggacagacaacttcacttgcatttca
gatcctctcccttgcccctggttgccgattgatcttcccagtgatgccgcctgtgcagta
attcaggccctcggacgtttcatggccgcttacttcaccaaccagccgctcttcattctg
cctgctcataatgtggctatcctgcctccactacacctacccctcgcctcgagtatcggc
cgcttggtgtccctgttccaagaagaagtggctaaagcagttcgacagcaacacctgtcg
gaggtttggacggtggactacgctcaggacttgcttctgctggggggtctcctgcctgag
gctgtgtggttggcgtctcatctgggcgactggaaaactgcagtgactctaagcttggca
tataccacttattgtgcaaaacattttgactttaatcagatcagaaggagagattttctc
ctgccagaagagttacagccagaaagcatttttcagtctgaactgagggatcttcttggc
agcaaaaccaatttacgagagtggacagataaagacgggaatgacagctttacagatccg
atggaaggagaagactgggaggttttacaggcttctgtgcacgagattctgaaagcttca
gccatggcaggagtgaatgtcatgtcatttcctttgtcgaccttgctggacaaggttaaa
gacatgtgcttgttaatgcctacattggtcccctatgaagtgtacctaccttcaccacct
ctgtattgcccacagccttctccaaacacacaggaccaaatgtgtgaaacggggccattt
gctgaacttgtttgtcgtcacaaagtctctggagttctccaaagattactcttgcttctg
agatctgcccattgttgccgtcctgctgcacaatggtacatcagttgcctgcggcgtgct
agacacatcctgcacaagatcaagaagaagtattcctacccatcagcttctcaggaggag
aaaacttttcctgagggactgatgaagttgattagccgttctggattcttcagacgggac
tctaataaagacctggaccctgataccatccaaacaatcatttgtttcagagagctatgc
gctttatgctggatgcttcatgtcagggatcagctctcccttcactgcaggaagtatcag
gctgccagacaacgtgacggagaggaagcgatcccagaggattcaccaggaaattcagcc
aatgttaccgctcttcactgggcttgtcgtcttctgcctttctctcacttcctcagtgaa
gaggaggtccttcaggacataatactcagtcttctgtctgagctacctcctgtctccttg
gtggcagacacgctggttcgagcctttccacaggaggaagagtcggtcagggtgtcttta
agagagaagtataagttactcctgcagagacttggccagtgcaaccttctcggagaaggg
ggagaagacggggaagagttgatgatgatttttattcaagatagaaaaagacacaggagg
aaacatttggcgcgattgcagaggcacttggccccgcctgtgctccatctgtgggagaaa
gtagaggaacaggaggacagaggggggcgaactgacacggccacatcagggcagctgtcc
ttggggacaactgtgggcaccagcactgtgaccgagtttaaccagccagtgtgcagcgat
gcagacacagcagtgaatacatctgagagaatctcaactaaacagcaccgtgcagccgtg
agcagcagcaagaaagatagacagaagatgacatctaagacggacagtgtccttaaagaa
aacaccaatataagtggagagagagaaaaggagcagctttctttgccagcagtcggctcc
tgggagtttgagctggaagacgaggagtatttaaatttcctggagcttttccttggctac
gtcctagagaaggacgctgctggtgggatggactgtggcgacgagatccctttgctgaaa
ggtttctgctctcaactacgggagaaggagttgcattctctaacatttgatgtagtctca
agtatacatcgtcgtcaaagaggcgggcaccttctagagaggaaacacttggggaagccc
ccatcggtgttcagagcaggctgttgctacaaacctatgaaacaagacgtgatgcttgaa
ccgcagacttcttccgtttggagtgaaactcccgttttcaggagcagcctttctgtcgag
cggagaaccgagaagcagaaaggtttgtttggccactggcaacaaaacgtctcttcagca
agactaaaggaagccagtgttggctctgaaaccagttttgtccagaatgccttgctcact
gaaaacccttcccctggcttctcatcatctgttgaagttgtgactgacttacagcagggc
ttggatccggagttagaggcccgttttccagagctgggcaggttgctcgagtggatggtg
cgttgggccgatagaaggatactattggggcatcatggtaacaagaagaaagacatggca
gatgaacaaaatgatggagttgtgattcgtgtaaaaaccacagcacctgctatccttacc
tctttaagtttgttggagcacaggtatgctgctcaaccccaaactgagtactacacctcc
cacagccaagttccggaaatgcaatgggcttttccccctgtgctgctttcgggcgttgaa
cggaagacggagagagagagcagcattgatactggttaccctggatccaccaacactcct
atcactggtccggatcataatcggcagcgaggagaggctactccctctgtctcagatgaa
caaaaggagctgatgtttccggctgatgaggttcagctcagctttgattctcgacagaga
gagccacattccccacagcagacctttgatgacttggatgtaacacctgaaagagaagac
agaagcggaaacagcaagagcgtcgaagtgttactttctgattccattcaggatacctct
aaagatgtctgctcacctgaaatgagtttaaagcttgaagacctcgactactcagtgtct
ggttcatcgtcccaatatcctcctgttaattcagaacctgctccttcagccatccaccct
aaacctcctcctcctgcagaatcttctgatttgggtggcgttctgctccccaaccctgct
gctgatcagccacaaatctccacagctggggcgccccctgctgattttacaacgtctact
ctgcctttgataacttccacaatgagacagcgtctgggtgaagacttattcagattagtt
cagcatatcaactacatgagtctgaacgaggttttaggagctacgttttccagtttccag
atggcccagcagaactccttacagcttaatatgaatttatcttctgctactagaataaac
cctgagccaaatgcttttccagttcaaacttcttccaccgctgtgccacagacacagacc
tgtgtgccaaaaccagaatctaatgaaccccagttgaatccgattgggtcgtatcatttt
gcagcccagcctgtcgtgcaaggaacaggacttggtctgcatcacatcaaccaaagccaa
cacaccagaaccaatagtgagatgcagcccctctctgtccaagcagagtcaccacaaact
cagcaaacggggaagaggagactgatcccgtcttcagacggtctcctggccactactgaa
aggagtcacgctgttcaacaccaaccgtatgacagcagtgtacacactgactctgctgca
cagatgtcgggtctgaagttacttaagcttcatcactttgctatggcagaatacagtgcc
cgacactatgccgctcaacatgcacaggctcctcacagggcaaaccttaagtccaatcag
cccaaggccacacactatgatcaatccacttggaaaaagaaaggtggagagcaaagaaat
gggttttctgttcaaactaagcatctcctatttaatcctgcacacgatccaactctgagg
agctctcactcgctgatggggccgacaggacagttctttggtcaagcgttccctctacat
cctgctgcttttccgactcaaaaacctgcaccaatgcagggccttcgtctgttgcagtta
cgtgatactccgcctagcagctttaacttccctaaactgattacagcaatacctgctgtt
atttcaactccaatgacagaagttccaataattaagcttttacacattgagtctggaccc
aaaatggtggcaccccagaatattccttcaaaacaaaaggttcgtcttacgatggagttg
actgctacgaaaaaattgagacaggatcagctgcagataccaagaccagatcactctgat
gaaggcattagaaatctaaccagcaccccctgcttgagttcagctaaaaggcagaagaga
agagaggaaaagcgaatgaacatagaagtctcattccgtccaaatgactccatcatccca
acaaaagaggcagcacaagtccttgaaagtgaagatgctacagttgctgaagagatcaaa
cctgcacaggatgtgacaggctcctcagaccatttgctgaccggtcagagattattagac
aaagttttctccacttccgctgaactccatgcctttgcttctacaaggaaacgtcctcca
gagtgtcatgatgctttcaccaacacagatccagctgctactcccacagttgagaacaaa
tctatttctgtccagacatctacaatgactagcagcccaaaaatgcaaagtccatgcaat
ttcccagaagctcctgttcaagtggagaaccagcagaaatcagagatgtgtctggatctt
ggtggacgccagttcataagtgtcttggatctggaagatgtgaggcagtctgaagatttg
ctgccatgtcctgactcagaagcagcagatatttcttcttcaccaacttctgctcagctc
catgttcttgccacctctgtcatcagctcagctgctgaagctgaggcacaattctcagtt
ccagtcacaaacaatcttcaggagcccagaactaccgcagaagtccttgaggtgtctcct
tcattcagttcctcccagcccgctagagttgcagagagaatcatcttacaagatgatgcg
ttggaggattcatctgcatctgaaatctgtcgagtcataaaggcgcagagcctcgtgcct
gacagagctccttcagcgcctgccacagcctggttctcctcccgcctgtcagatatggac
tctcagttggccgctttacagaacattgcagataatcttgagaaggacttttccaattca
agaatgctggtaaacacaattgaaaagctctccttagacagggagtctgatccaaaagcc
accatgggagtaaaaaaaagcgtcagactctctgttccactcaaagctccggatccagac
tctttacgtgcattgaagaaatgtgatgagatcaaagaacaggaagaggaacttgtgctt
catgacgactccgggaattctgcaataaaaccgtcgcgtcactattcaacctctcctttc
agtcagagtagtggtccatcctatcttcaagctccaggaaaaaaagagcacttccatgaa
acctacgatatatctaatgaaggggcagatgggactctgagtcagactgggttatccgac
actatggaaatcttagacgacttggtcaaggaaggctacttatctccctctgactgggat
ttggatcgctctcagacttcacaccagaacaggaggcaagaccagagggaacatacctgg
acattagagaaaaagaagcttcctgaggaggagaggaaggagctggaaggagccgtcagg
aggcaggaccagcgggaacatagctgggcattacagaaaaggatgcatcctgcggaggag
aggaaggagctggaaggagccgtcaggaggcaggaccagagggaacatagctgggcatta
cagaaaaggatgcatcctgcggaagagaggaaggagctggaaggagccgtcaggaggcag
gaccagcgggaacatagctgggcattagagaaaagtacgcatcctgaggaggagaggaag
gagctgaggatttggatgagacggaaacaaagggaaagattgactgcttataaaaagcac
agacagagcctgagggacagggagcgtaaaccgttctgtggctcttcagtagagcatttt
ccaaacagaaaaacagaaagcatatggggtagcagagaggaaaaagaaaagttaatgctt
cttaatcagtactttcgaagaacagaagaggcctgccagttggccaatgactttctcact
tctcgtgttaccgggccaagttcctcccagacttgtgaaggtccatttctctacagcccc
tggttgaattcggatccacctcttggccacccttttaggcctttcaacgtatcagccact
gacaaaaaaagtcccacgtctcagacaggaagtttcccttctcagttacgttattctgca
gagagtgaatattcatatgatctccgcagaagactgagtcttcgtcgaccagtaattttt
aatccagcggaccaactatctcaggtaacgaggggtggtatgctcagcaacatcaagagc
caatccaaactctacgcagccagccagagtcaggcacagcaagtaggattacggaaaaaa
actgagttcaacaacagtttctcacgtggagctgctttacaaagagggaacctgaaggaa
cacagacaagtgaaggagcctgaagtgaggaagcattcagaatttaccagaccgaaggct
gtggaggattatacctctgtgactgggattttacatggggaggacggagcagtcgcagat
ggcgtttcagagatggactggctggataatctctctgacagcgcaggaagcagcctaagc
agaatagactggactgccattgaaaggatggtggctgaagaagatggttaa
DBGET
integrated database retrieval system
