Xiphophorus hellerii (green swordtail): 116727303
Help
Entry
116727303 CDS
T07363
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116727303 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116727303 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116727303 (plekhm1)
Membrane trafficking [BR:
xhe04131
]
SNARE
SNARE associated proteins
Others
116727303 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Cytochrome_C7
PH_13
Motif
Other DBs
NCBI-GeneID:
116727303
NCBI-ProteinID:
XP_032430556
LinkDB
All DBs
Position
10:14067946..14085801
Genome browser
AA seq
1079 aa
AA seq
DB search
MLATQMPETLQEAKDVKQIKDKLAQSLKALQKRYVTSDAVVTSEDENANLLCSALEAIFI
HGIKSKYIRSEAGGRNRKGDRGVLPQPYFWSLLKTVTHRDVITELEKISYLGTDVGRCRA
WLRLALNHGLLECYLASLFREGSKLHAHYQPSALLLNAEEREVLLSYLQGLASLTFNLSY
KSAVLNEWTTTPLALAGLCPLSQSDLLNGASQLASKPPRKESWDTASQSSGSSDAMDVQR
VYPMSPPGGEVLQGEKAVLYSSNLSLDTTGSSQLSSSLSSDSYLQGQDPRSLNGEQWSSG
DLDAPIIVRNYIKRHQKDVQSDFRESGQCSQDSMREDSFISSTGGELFSENTTFSGSDSE
NQGQDMSAQDPEEQLQNPDPEPPPPSDQIPSCDEQLDVQAAQEMCSSSSSELCSDTAVIS
SVIKPSEPVEEEHVAVVPKSAEPVQEMKLKGASEKRSSESQTSKGSQRSTSIISRKLSTD
SFSNSRSWISEDDIYKPDLVEVPDNEEVSPTADLKASQSPPSVVHRRQIGLSNPFRGLLK
LGHLERRGGMGIWRDYYCELSPFEFRMYLNAEDRECFDNCSLLRCEDIRITSSEGRFDLS
FPGKRLYLRAANQDEAEDWVDRIFEAVNKCRPTPHDDEHWEVLQGSGENGVDERSVSSAS
SALSSPERRLSPSDLSETAPPVQEFDWTRTTDLETDALKEAVLYLSTDSEARTWAPLVVS
LSLEALKGFRIQEERKVLWLNNPIAEIRDIVPDVSLGGPAFFKVLTVRETLRFRAENPEE
ARSWRVLIRGALDSYLESGDDVISEEPPPVWSTGVNGNLHRLVQHRLKENGQLLGHLYTV
PSEKGLDAQSFKCSGCHQQIGPSRGRARLCEFSGQYYCEACHKGDTTIIPSRMVHNWDLT
QREVSKKALRLLAQIEKEPLMNLELLNPDLMSHAESMTQAHSLRERLRLLGDYLLTCRSG
ACKKLHARMGQRTYLLESRHLYSVLDLRQIADGQYGNFLTSLVQQASNHVLNCDLCTQRG
FICQICHSNDILFPFQFNSTTRCKDCKAVFHLFCKTEQNSCPRCERMKKYLERDLQDSH
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccacacagatgccagaaactctacaagaggccaaagatgtcaaacagatcaaa
gacaagttggcccagtctcttaaagccctccagaaacgatacgtgacatcagatgccgtg
gtcaccagcgaagacgagaatgctaacctcctttgctccgctctggaggccattttcatt
catgggatcaagagcaagtatatccgctccgaagctggaggccgaaataggaagggtgac
cggggagtcctccctcagccttatttctggagcctcctcaagacggtcacccaccgtgac
gtgatcacggagctggagaagatcagctaccttggcacagacgtgggccgctgcagagcg
tggctgcgactggccctgaaccacggccttctggagtgctacctcgcgtctctgtttcgg
gagggctccaagctgcatgctcactatcaacccagtgccttgctcctgaatgcagaggag
cgagaagttctgctcagctacctccaaggtctggcctcactcacattcaacctgtcctac
aagtccgctgtccttaacgaatggaccaccacgcctctggctctggcgggtctctgccca
ctgtcccagtcggacctgctcaatggtgcaagccaacttgcctcgaagcccccccgcaag
gaatcgtgggacactgcgtctcagtcatcaggttcatcagatgcaatggatgtgcagaga
gtctaccctatgtctcctcctggcggagaggttttacaaggagaaaaggcggtgctgtac
tcatctaatttgagtctggacaccacagggtcctcccagctctcctccagcttgagctcc
gacagttacctgcagggacaggacccccgcagcctgaatggagagcagtggtcttcaggt
gacctggacgcccccattattgtcagaaactacatcaaaaggcaccagaaagatgtgcag
tctgatttccgagagagtggacagtgcagtcaggactcgatgcgtgaagactcattcatc
tccagcacaggaggcgaacttttctcggagaacacaacattcagcggctcagacagcgag
aaccagggccaggatatgtcagcacaagaccctgaagaacaactccaaaatcctgaccca
gagccacctccaccctctgaccagatcccatcctgtgatgaacaacttgatgtccaagca
gcacaggaaatgtgcagtagttcctcttctgaattatgctccgacacagctgtgatctct
tctgttatcaaaccttctgagcctgtggaggaagaacatgtggctgttgttccgaagagc
gcagagccagtccaggaaatgaagctaaagggtgcttcagagaagagaagctctgagtca
caaacaagcaaaggctcacaacgctcaacaagcatcatcagcaggaaactgtctacagat
tcattctcaaattcgcgttcttggatttctgaggatgacatctacaagcctgacctggta
gaggtgcccgataatgaggaggtgtctcccacagctgacctgaaggcttcccagtctcct
cccagtgtcgtccatcgtagacaaatagggctttccaacccctttcgaggcctactgaag
ctcggccacttggagcgacgaggcggaatgggaatatggcgcgactactactgcgaactc
tcaccctttgagttcaggatgtatctgaatgcggaagatcgtgaatgtttcgacaactgc
tccctcctgcgatgcgaagacattcgtatcacatcgtcggagggccgattcgatttgtcc
tttccggggaaacggctttacctccgagcagccaatcaggatgaagcagaggattgggtg
gaccgtatatttgaggctgtaaacaaatgccgaccaacgccgcacgatgatgagcactgg
gaagtgttgcagggatctggtgaaaatggagtggatgagcgttcagtttcatctgcttcc
tctgctctctcaagccccgagcgacgcttgtcaccctctgacttgagtgagacggctcct
cctgtccaggagtttgactggactcgaactactgacttggaaacggatgctctcaaagaa
gctgttctgtatctctccacagattctgaagccaggacttgggcccctctggttgtttcc
ctttctctggaggcccttaaaggctttcgcatacaggaggaaaggaaggtgttgtggcta
aacaatcccattgctgaaatcagggatattgttccagatgtctccttgggaggaccagca
ttttttaaagtcctgacagtgagagagacgctaagattcagagcagagaatcccgaggaa
gctcggtcttggagggttttgattcgtggagctttggactcgtatttggagagtggagat
gatgtaatttctgaggaacctcctccagtctggagcactggagtgaatggtaatctgcat
agactggtgcaacatagactgaaagaaaatggacagcttctgggacacctctacacagtt
ccatcagaaaagggactggacgctcagagctttaaatgctcaggctgccatcagcagatt
ggcccgtcccgaggaagagcccggctgtgtgagttttcaggccagtactactgtgaggcc
tgccacaagggggacaccaccatcatcccgtcgcgcatggtgcacaactgggatctcacc
caaagagaggtgtcaaagaaagctctgcgtctgttggctcagatcgagaaggagcctctg
atgaacctggagctgctgaatcctgatctgatgagccatgcagaatccatgactcaggcc
cacagcctgcgagagaggctgcgcctgctgggcgactacctgctgacctgccgcagcgga
gcctgcaagaaactccatgccagaatgggacagcgaacttatctgttggagtcaaggcac
ctgtacagtgttctggatttaagacagatagcagatggccagtatggaaacttcctgacc
tccctggtgcagcaggcctctaatcacgtgctgaactgcgacctgtgcacacagcgaggt
ttcatttgtcagatatgccactctaatgacatcctcttccccttccagttcaacagcacc
accagatgtaaagattgtaaagcagtgtttcaccttttctgcaagactgaacagaactct
tgtcctcgctgtgagcgaatgaagaaatacctggagagagatctacaggactcccattga
DBGET
integrated database retrieval system
