Xiphophorus hellerii (green swordtail): 116727652
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Entry
116727652 CDS
T07363
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116727652
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116727652
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GFIT
Motif
Pfam:
LSDAT_euk
Ion_trans
LSDAT_prok
DUF7557
Motif
Other DBs
NCBI-GeneID:
116727652
NCBI-ProteinID:
XP_032431107
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Position
10:3010641..3033419
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AA seq
1255 aa
AA seq
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MKDTGEVRGSTDKLGKSEKDQTWIAKIYKKRVCTTFVEDSSSNGALCQCGGARDAHSSVA
LGDCFSTAIVNRWDSAQHSSEYPTDAFGEVQFAGASKRHSHFLRLSWDTQPSLVYTLMTT
HWRLPIPNLVVSVVGGEGRTKVKTWVREVLRQGLVKAAQRAGAWIFTTGLREGVGRCVGE
AVRDHATAASSDSLNKVVAVGVAPWGMVHNREQLVNPKGSFPAKYYVQNSVRDSCCLDNN
YQSFLLVDDGREGRRGGDMAFRTKLEDHISHQRTGIWGSGTIDIPVLCMLISGDTSSLER
MDLSLKNSIPWLVLAGSGGLADFLTDLLENVSAAPVFQSTSEVDGEPGPSVDLKEKVAER
VKKHFPAESESDKLVERALSIYQCRDLISIHYGEQESPTDFDTVLLKALVGASKQRVSVE
ASPYNEELKLAVAWNRVDIAKSELFNGDIQWRYQDLKESMSDVLINDKPQFVQLFTENGL
NITEYLTYGRLEQLYCSVPDSTLLYQLLQRQLVVRLGTATTVPAASSEPKSPLRMPEENF
QSGPTTDITLFEISGVLDLLLGDTCQPFYFDVLGISDISSKRKAVKRVSRLLCENRSYQD
QRCLYPWASLFIWAVLQNRTEMATFFWEMAGESVLTALSGCKMLRELSKLESETEIKLSM
KDLAQTFENLAHDIFSSCYHSDESRSFDLLIRKSPVWGSTTCLQMGMGADARLFFSHDGV
QSFLSQIWWGDMQRDTAVWKLLLTFFCPFLCYTNFISFREDGNQQEEEGRSSDEDLSPDA
DNHYGTTIFSFSDIKHIEADGQLSSPIGGVPQPFRPPRRPFIVSRWRQFWFAPVTAFLGN
VLMYFLFLVLYSYVLLLDFRDPPPVGLAVSEYVLYFWVFTMVCEEIRETFFSGVMTLRQR
LRVYIQDVWNKFDILAITLFISGLICRMFAWSYEYGRELLCVAFMVFTLRLIHIFAIHKE
LGPKIIIVGKMVKDVFFFLFFLGVWIMAYGVANQALLYPRDPNFDRIFRRVFYRPYLHIY
GQIPVEEVDVKHVWDVECTENLTLIDEGAEQCRNPSGNWLVVILLMVYLLVTNILLINLL
IAMFSNTFTEVQVNSEFYWKFQRYNLIVQYHCRPSLAPPFIIFSHINLFIKRKIRKVPSV
KVQQFVLQLSQKAANRLMTWETIQKEDFLTAQNKIQKSSDSERLKRMSVKMDSVAKHMAE
NRDLDQRLRALENEMENCSNALRWIVDTLAQGGAFKPPRPPPTFRDGVPSSSSSS
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaccggagaagtgcgaggaagcacagacaagctcgggaaatctgagaaagac
cagacttggatcgccaagatctacaagaaaagagtttgcaccaccttcgtggaggactct
tccagtaatggagcgctgtgtcagtgcggaggagcgagagacgcccactcctccgtggcg
ctcggggactgcttcagcacggccattgtgaaccgctgggacagcgcccagcactcgtct
gaatacccgaccgacgcttttggagaggttcagttcgcaggagccagcaagagacacagc
cattttttgcgcctgtcgtgggacacccaaccatctctggtctacaccttgatgacgacc
cactggcgtcttcccataccaaacctggtggtttctgtcgtgggtggagagggcagaaca
aaggtgaagacctgggtacgagaggtcctcaggcagggacttgtgaaagcagcacaaaga
gcaggagcgtggatctttacaacaggactgcgtgaaggcgttggcaggtgtgttggcgag
gcggtgagagatcacgccactgcagcctcctctgactccctcaacaaggtggtggccgta
ggcgtcgctccgtggggaatggtgcacaacagggagcagctcgtcaaccctaagggcagc
tttcctgcaaagtactatgtacagaactcagttcgggattcctgctgtctggacaacaac
taccagtccttcctgctggtggacgatgggagagagggccgcagaggaggagacatggcc
ttcagaaccaagctagaggaccacatttcccatcagcgcacaggaatatggggtagcgga
acaattgacatccctgttctttgtatgttgatatcaggagacacaagcagtttagagcga
atggatctgtctctaaagaactccattccctggctggtgctggccggttcaggaggcctg
gcagacttcctcactgacctcctggagaatgtgtcggctgccccagtcttccagtccacc
agtgaagttgacggcgaacctggtcccagtgtggatctgaaagaaaaagtcgcagagcga
gtcaagaagcacttccctgcagaatcggagagtgacaaacttgttgagcgtgctctaagc
atctaccaatgcagagacttgatttcaatccactacggagagcaggagagtcccacagac
tttgacacagtcctcctcaaggcgttggttggagcaagtaagcagcgcgtgtcagtggag
gccagtccgtacaacgaagaactgaaactagctgttgcatggaacagggttgacattgcc
aagagtgaacttttcaatggagacattcaatggaggtatcaggatctgaaggaatccatg
tcagatgtcctgatcaatgacaagccccagtttgtgcagcttttcactgaaaacggtcta
aacatcaccgaatacctgacctacggcagactggaacagctctactgctccgttcccgat
tcaacgctgttatatcagctgcttcagcgccagttagtggtcagacttggaactgcaaca
actgtgcctgcagcaagtagcgagccaaaatcacctttgagaatgccagaagagaacttt
cagagcgggccaacaacagacatcacccttttcgagatttcaggagtcctggatttgtta
ttgggtgatacctgccagccgttctactttgacgttttgggcatttcagacatcagctct
aaaaggaaagctgtgaagcgtgtcagtaggctgctgtgtgaaaatcgctcgtatcaggac
cagcgctgcctctacccctgggcttcgctcttcatctgggctgttctgcagaatcgcact
gagatggccactttcttctgggagatggcaggagagtcggtgctgacggccctcagtggc
tgtaagatgctgagagaactgtccaagctggagtctgagactgaaatcaaactctccatg
aaagatctggcccagacgtttgagaatctggcacacgatatcttcagctcttgctatcac
agcgatgaaagtcgttccttcgatctgctgattaggaaatctcctgtttggggaagcacc
acctgcttgcagatgggcatgggcgccgacgcgcgcctcttcttcagccacgacggagtg
cagtcgtttttgtcccagatctggtggggcgacatgcagagagacacggcggtgtggaag
cttctgctgacctttttctgccctttcctctgctacacaaacttcatttctttcagggaa
gacggtaaccaacaggaagaggaaggaaggagcagcgatgaagacctgagtccggatgcg
gacaatcactacgggacaaccatcttctctttctccgacatcaagcacattgaagctgac
ggccagctctccagtcccatcggaggcgttcctcagcccttcagaccgccgcggcgccca
ttcatagtgtcccgctggcgccagttctggttcgctcccgtcacggcgtttttggggaac
gtcttgatgtacttcctgtttctcgtcctgtattcgtatgtgctgctgttggacttcaga
gacccgccccctgtaggtctggccgtgtcggagtatgtgctctacttctgggttttcacc
atggtgtgtgaggagataagagagactttcttttcaggggtgatgactttgcgtcaaagg
ctcagagtttacattcaggatgtgtggaataaatttgacattcttgctatcactcttttc
atctcaggattaatctgcaggatgtttgcatggtcttatgagtatggaagggaactcctg
tgtgtggccttcatggtcttcacccttcgtctcattcacatttttgccattcacaaagag
ctgggaccaaaaattatcattgttggcaaaatggtgaaagacgtcttcttcttcctcttc
ttcctgggagtttggatcatggcgtacggagtggccaatcaggctttgctttacccccgc
gacccgaattttgatcgcatctttcgcagagttttctacaggccgtacctgcacatctac
ggtcagattcctgtggaagaggtcgatgttaaacatgtttgggatgtagaatgcaccgaa
aacctgacattgattgacgaaggcgctgagcagtgcagaaatccctctggtaactggtta
gtggtcattctgctgatggtttatctcctggtgaccaacatcctgctcatcaacctgctc
atcgccatgttcagcaacacgtttactgaagtccaggtcaacagcgagttctactggaag
ttccagcgttacaacctgattgtccagtatcactgcaggccgtcactggctcctccgttt
atcatcttctcccacatcaatcttttcatcaagaggaagatccgtaaagttccctctgtc
aaggttcagcagtttgttttgcagttaagtcagaaggctgccaacagactgatgacatgg
gagacgatccagaaggaagacttcctcactgcccaaaacaaaatccagaaaagcagcgac
tcagagaggctgaaacggatgtctgtcaagatggatagtgttgctaaacatatggctgaa
aacagagaccttgaccagagacttcgggctctcgagaacgagatggagaactgctcaaat
gctctgagatggattgttgatactttagcacaaggtggtgcgtttaaaccacccagaccg
ccacctacgtttagagatggcgttcccagttcttccagttcgtcgtag
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