KEGG   Xiphophorus hellerii (green swordtail): 116727919
Entry
116727919         CDS       T07363                                 
Symbol
aff4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116727919 (aff4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xhe03021]
    116727919 (aff4)
Transcription machinery [BR:xhe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     116727919 (aff4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 116727919
NCBI-ProteinID: XP_032431486
LinkDB
Position
11:26390542..26425592
AA seq 1106 aa
MASQSGNMNREDRNVLRMKERERRNQEIQQGGGGGEAFPANSPLFPEPYKVASKADLLSN
RIQSMLGNYDEMKEPIGDTLPKLPGKPSNSSSSSEEKSGPPLFGGDQRGVGSGGGSQSSK
WTPVGAPPGGSSSQSQKRSGLSGGHGSQRNSGSSSGGSSSSQRGEVREKKSSKHSGGSEH
SKSHTSSPAKGSLSSSSSHSRSSLSAEQHHPKYRNKSPRDREANWDSPSRVHTSFPSGQH
SNQTFPPSLVSKPSSMLQKPTAYVRPMDGQETAEPKSSQAESYGGQSHSSTMGEVKTMGK
ASLTKLKIPSQPVEGSGDANCVDEILKEMTQSWPPPLTAIHTPCKTEPSKFPFPTKDAHS
FPSGHKRGSSSKSSSSHQPKDSTMLKEDLIVSSSEDSDGEQESKNASRNTSASNNSEAAE
PSRDDSSSHSGSESSSGSDSESESSTTDSEANERPRTASPEPEQPVTNKWQLDNWFKNVP
PKCKKEGRDYSSKDSAPPPPSRDKGTEGGRGRQKSPAQSEGGTNPRIRVGKKQPKKSEKP
PVVEEPKGGLKVETEPAPEIPPLRPIAATKGSRKPSIKKEPKSSPRPSAASVTTTTDKRK
AKAPTKSREILSTDSSSSDSEGNDSIPSSSQTPKYTESIRTPVCVFSPVLSPLSDPEERY
PTRQPQPQVLLVKIDLSLLSRIPGRPYKEPAEIKVEREDSQDRESSKQNKSKRKHKTDEE
GTKPESKRFKPDDKTQSPHKTSSKESKRPLEKKEEPVPSPSISGPQRTPKSEHPSRKGTV
NQPSTLLSSGSTSKKAGSHGSKGSSTSKHKKGDDKGRSTREGKVDEKISTNQLAVPPLST
DGSRSQRSKMVFEDRVHSADHYLQEAKTLKHNADALTNRFEKAVYYLDAVVSFIECGNAL
EKSAQEAKSPFPMYAETVELIRYTMKLKSYMAPDATSADKRLAVLCLKCQSLLYLRLFKL
RKDSALKYSKTLTEHLKNSLSNTQAPSPGMGNKAAGMPSPVSPKLSPGTAGSYSSVSSNS
SASSSVTIPQRIHQMAASYVQVTSNFLYATEIWDQAEQVSKEQKDFFSELDKVMGPLIFN
TSSMTELVRYTRQGLHWLRLDANLSH
NT seq 3321 nt   +upstreamnt  +downstreamnt
atggcctctcagtcaggcaacatgaaccgtgaggaccggaatgtgctccgaatgaaagaa
agagaaaggagaaatcaagaaatccaacagggaggaggaggaggagaggcctttccagca
aattcccccctcttccctgaaccctacaaagtggccagcaaggcagatttactgtccaac
cgtatccagagcatgttgggcaattacgacgagatgaaagagccgattggtgacactctt
ccaaagcttcctggtaaaccttcgaacagctcgtcttcctccgaggagaagtccggcccg
cctttgtttggcggagaccagcgaggtgtgggtagtggaggtggtagccagagcagtaag
tggactcctgtaggcgcaccacctggtggatcttcctctcagtcacagaagcgttctgga
ctctcaggtggacacggcagccagaggaacagcggcagtagtagcggcggcagcagcagt
agccaaagaggggaagtgcgggaaaagaaatctagtaagcacagcggaggctcggagcac
tcaaagtctcacacttcaagtccggcaaaaggttcgttgagttcttccagcagccactcg
cggagctccttgtctgctgaacagcatcaccccaagtaccgcaacaagtcgcccagagac
agagaggctaactgggattccccctcacgggttcacacgtctttccccagcgggcagcac
tcaaatcaaaccttccccccgtcgctcgtctccaagcccagctccatgctgcaaaagccc
acggcttacgtgcggcctatggacggccaggaaacggccgaacccaagagctcacaggcc
gaaagctacggcggccagtcacacagcagcaccatgggagaggtgaaaaccatgggcaaa
gcttcgcttacaaaactcaagatcccgtcacagcctgttgagggatccggtgatgccaac
tgtgtcgatgaaatcctaaaggaaatgactcagtcatggcctcctccacttacagccatc
cacactccctgtaaaacagaaccctccaagtttccattccccaccaaggatgcacactct
tttccaagcggacataagcgtggtagttcatcaaagagctccagcagccatcagcctaaa
gatagcaccatgctgaaggaagatctgatagtaagtagcagcgaggacagcgatggagaa
caagaatccaagaatgcctcaaggaacacatcagcaagcaataacagtgaagctgccgag
ccgtccagggacgactcgagcagccacagcggctccgagagcagctcgggttccgacagc
gagagtgagagcagcacgacggacagcgaggccaacgagcgcccacggaccgcctctcct
gaaccagaacagcctgtgaccaacaagtggcagctggacaactggtttaagaacgttcca
cccaaatgtaaaaaagaaggccgagactacagctccaaagactcggctccaccaccacct
agcagggacaaaggtacagagggtggccgggggcgacagaagtcccccgcccagagcgaa
ggtggaacaaatccaagaatacgagtcggtaaaaagcaacctaagaagtctgagaagccc
ccagtggtggaggaacctaagggaggtctgaaagtggagactgaaccagctccagagatt
cctcctctccggcccattgctgccacaaaaggctcacgcaaaccaagcattaaaaaagaa
cccaagtcttctccacggccgtctgcagcttctgtcaccacaaccacagacaagcggaag
gccaaagcgcccaccaagtctcgtgaaattctttctacagactcttcttcgtctgattcc
gagggaaacgacagcattccgtcctcgtcgcagactcccaagtatacggagagcatccgg
acccccgtgtgcgttttctctcccgtgttgtctccgctcagcgacccagaggagcgctat
cccacgagacaacctcagccgcaagttttactcgtcaagattgatctcagcttgctgtcg
aggatcccagggcggccctacaaggagcctgcagagattaaagtggagagggaagattct
caagatcgagaaagcagtaagcagaacaagtccaagaggaaacacaagaccgatgaggaa
ggcacgaagccagagagtaagcgattcaagccagatgataaaactcagtctcctcataaa
accagcagtaaagagtcaaaaagacctttggagaagaaagaggagccggtaccctctccc
tccatatcgggtcctcagcggacacccaagtcggagcatccaagtcgaaaggggacggta
aaccaaccatccacattgctatcgagcggcagcacgagtaaaaaagcgggtagccatggc
agcaagggtagctccacttccaaacacaaaaaaggagacgacaagggacgcagcacacgt
gaaggcaaagttgatgagaaaatatctactaaccagctggctgtgcctcctctttccacg
gatggctctaggtctcagagatccaagatggtgtttgaggacagggttcattcagctgat
cactacttgcaagaggctaagacactcaagcacaatgcagatgcactgacaaaccgtttt
gaaaaggcagtttactacctggatgccgtggtctcgttcatcgaatgcggtaacgctctg
gagaagagcgcgcaagaagccaagtcgcccttcccgatgtacgctgaaacagtggaactc
atcagatacactatgaaattaaaaagctacatggccccagatgccacttcagcagacaag
aggctagctgtcctttgtctcaaatgccagtctcttctctatctgcggttgttcaagctg
aggaaagacagcgctctaaaatactccaaaactctcacagaacatttgaagaattctctt
agtaacacccaggctccctctcctggaatgggaaataaggcagcaggaatgccctctcca
gtgtcgcccaaactctcaccaggcacagcaggaagctactcgtcagtcagcagcaacagc
agtgccagctcatctgtgaccatacctcagcgtatccaccagatggctgccagctacgtc
caggtcacctccaacttcctatacgccacagagatctgggaccaggcggagcaggtttcc
aaggaacagaaagactttttctctgagctggacaaagtgatgggtcctctgatcttcaac
accagcagtatgacagaactggtgcgttacactcggcagggtctccactggctgcgactg
gacgctaatcttagccactag

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