Xiphophorus hellerii (green swordtail): 116728324
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Entry
116728324 CDS
T07363
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116728324 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116728324 (trim37)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116728324 (trim37)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116728324 (trim37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
HlyD_2
zf-C3HC4_2
PIN_8
MRFAP1
BORCS6
Motif
Other DBs
NCBI-GeneID:
116728324
NCBI-ProteinID:
XP_032432249
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All DBs
Position
11:1131368..1178298
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AA seq
957 aa
AA seq
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MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCSLTKHEDNDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLVEIYEQHVTKVKEEVGKLRRRLMELISLVQEVERNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLHSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLINFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASRDPTKNII
REFASDFEIGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSGYIQQINNLKERLAIELFRRQTSRSSSPPDLRLTAGTATSERDPGSVKSDDDA
QTTLSNSKKGEEEERTQHDDSNELSDGDLEVDCLTEEEVNPLDGSSTSGSSTATSNTEEN
DIDEETMSGENDVDFMGSLEAEEGELSEDLAGATGGFSSSMLSSHRGMTAGCSSGGGAAS
APPVGGAVGPGNSSLLEIDPVILIQLLDLKERSSVESLWGLQPRPPVSLLHSQAHAHSRK
ERERRPQVVRRSAPDSGVLIRLKAQMAEVRSKMADVKSQVLETRESGEPRPGPSGGFGME
EASAHSASSELPACHKGDGLEQVGRAAVTRSKACRPTRKSLSPVLDSSGGSLLVKRRSSE
DMKDDLRGAESAAELSPHPKDGTGAGEGELQSEAASGPLVSLSSSSSDQASPSTKQKCSA
EKQLYAASGPRDEIFSLGGLSYITASKACSGRTLGATVLECELESSRNSHQSLLEGISAP
AQSNEDQSSSVLMAATSSDSDTEDEALQSSNSRYDNHTPPCTGEPLLSDDNGLPAIR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaagtgttgagagcattgctgaggtgtttcgctgcttcatctgcatggag
aaactgagggatgcacgcctctgcccccactgctccaaactctgctgcttcagctgcatt
cggcgatggctgactgagcagagagcccaatgtccacattgtcgagctccactgcagctg
agggaactggtgaactgtcgctgggctgaggaggtcactcagcagctggacaccctgcag
ctctgcagcctcaccaaacatgaggacaacgacaaagacaaatgtgaaaaccaccatgag
aagttgagtgttttctgctggacctgtaagaaatgcatctgccaccagtgtgccctctgg
ggaggaatgcacggcggccacaccttcaagcctttggtggagatttatgaacagcacgtc
accaaggtgaaggaggaagtgggaaaactgcgccgtcgcctcatggagctcattagtttg
gtgcaggaagtggagagaaacgtggaggctgtgaggggagcgaaggacgagagggtgagg
gagatccggaatgcggtggaaatgatgatcgctcgtctggacaaccagctgaagaacaaa
ctcatcactctcatgggccagaagacatctttgacccaggagacggagctgctggaatct
ctgctgcaggaggtcgagcatcagcttcactcgtgcagtaagagtgaactgatctctaag
agcccagagatcctgctcatgttccagcaggtccatcgtaaacccatgcagtcgttcgtc
accacgccggtcccaccggacttcactagtgagctggttcctgcttatgattccagcact
tttgtacttatcaacttcagcactctgaggcagcgggccgacccagtttacagtcctcct
ctgcagatatctggcctttgctggaggcttaaagtctacccagatggtaacggcgtcgtc
cgtggaaactatctgtctgtgttcctcgagctgtctgctggacttcctgaaacctcaaaa
tatgaataccgtgttgagatggtgcaccaggcgtccagagacccgaccaagaacatcatc
cgagagtttgcttcagacttcgagattggtgaatgttggggctacaaccgcttcttcaga
ctggacctgctggccagtgagggctacttgaacatgcagaccgacacactggtccttcgc
taccaggttcgctcacctacatttttccagaagtgcagagatcagtactggtacatcagc
cagttggagtcggctcagagcggctacatacaacagatcaacaacctcaaagagaggctg
gccattgagttgtttcgccgtcagacatcccgcagctcctcgccccctgacctgagactg
actgcaggcaccgcgacgtctgagagagaccctggctcagtgaagagtgatgacgacgcc
cagaccactttgagcaactctaagaaaggagaagaggaggaaagaacgcagcatgacgac
tcaaatgaactgtctgacggagacctggaggttgattgcctcactgaggaggaggtgaac
ccactggatggcagcagcacctcaggaagctccacagccaccagcaacacggaggagaac
gacatagacgaggagaccatgtcaggagaaaatgatgtagacttcatgggaagcctggag
gcagaagaaggagagctttctgaagacctggccggagccacaggtggattcagctccagc
atgctctcatcgcatcgaggcatgactgcaggttgtagtagcggcgggggcgcagcttct
gctcctcccgttggaggtgctgttgggccaggcaacagcagccttctggaaatcgatcca
gtcatcctgatccagctgctggacctgaaggagcgcagcagtgtggaatctctgtggggc
ctccagcctcggcctccggtgtctctgctccacagccaagcccatgctcactccagaaaa
gagcgggagcggcggccacaggtggtgcggcgatcagctccggactcaggcgtgttgatc
cgcctcaaggctcagatggcggaggtccgcagcaagatggctgacgtcaagagtcaagtt
ctggagacgcgcgagtctggggagcccagacctggcccatctggtggcttcggcatggag
gaggcttcggctcattctgccagttcagagctgccggcttgccataagggcgacggtctg
gagcaggtgggacgagcagctgtgactcggtccaaggcctgccgacccaccaggaagtct
ctgtctcccgttctggacagcagcggagggtctttgcttgtgaaaaggaggagctccgag
gacatgaaggatgacctcagaggagcagagtccgctgcagagctcagcccgcatcctaaa
gatgggacaggagctggagagggagagctccaatctgaagccgccagtggaccccttgtg
tctctgagctcctcctcgtcagatcaagcctcccccagcaccaagcaaaagtgctcagca
gagaaacagctgtatgccgcatctgggccaagagacgagatcttctccttgggaggactg
agctacataactgccagcaaggcctgcagcggcaggactctgggggccactgtgttggag
tgtgagctggaaagctcgagaaactcccatcagtccctgctggagggaatttctgcgcca
gcacagtcaaatgaggatcagtcgtcatctgtgttgatggcagcaaccagcagtgacagc
gacactgaggacgaggctctgcagagcagcaattcccgatatgacaaccacactcctccc
tgcacaggagaaccgctcctgtccgacgacaatggacttcctgccatcaggtga
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