Xiphophorus hellerii (green swordtail): 116730557
Help
Entry
116730557 CDS
T07363
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
xhe04145
Phagosome
xhe04218
Cellular senescence
xhe04514
Cell adhesion molecules
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116730557
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116730557
04145 Phagosome
116730557
09143 Cell growth and death
04218 Cellular senescence
116730557
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116730557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116730557
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
116730557
Exosome [BR:
xhe04147
]
Exosomal proteins
Proteins found in most exosomes
116730557
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xhe00537
]
Antigens
116730557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_II_beta
MHC_I_3
ig
Ig_3
Insulin_TMD
DUF6479
Motif
Other DBs
NCBI-GeneID:
116730557
NCBI-ProteinID:
XP_032435775
LinkDB
All DBs
Position
13:3106089..3118529
Genome browser
AA seq
357 aa
AA seq
DB search
MDKMLGFVFLLLLGIYSTEAVTHSMKYFYTGSSQVPNFPEFVVVGLVDDVQIDYYDSNTQ
KMVPKQDWVNDAADPQYWERNTQNAVVSQESFKANIETVKKRFNQTGGVHIFQYMYGCDW
DDETQQVTGYRQYGYDGEDFVSWDTKTNTWIAAKQQAEFSKNKWNNNKAELEIRKNYLNQ
ICPEWLKKYVNYGRSSLMRTDRPSVNFLQKASSSPVSCHATGFYPNRAEMFWRKDGEEIH
DGVEKGEIKPNNDGTFQMSVNIDLSSVPTEDRTKYECVFQLSGVNEDMTIRLEKTRILTN
ESPSNTILIIPVVAAVAVLGLIAVIGFIIYKKRNAKRPPSPVVQALIPEETQFLPQA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatgctcggttttgtgtttttgcttctcctgggaatctacagcactgaagct
gtgacccactctatgaagtatttctacactggatcctctcaagtcccaaacttcccagag
tttgtggttgttgggttggttgatgatgttcagatagattactatgacagcaacacacag
aaaatggtaccaaaacaggactgggtgaatgatgcagcagatccacagtactgggagagg
aacactcaaaatgctgtggtttcccaggagagcttcaaagccaacattgaaactgtaaag
aagcgcttcaaccaaactggaggtgttcacattttccagtacatgtacggctgtgactgg
gatgatgagactcaacaggttactggctatcgacagtatggctacgatggggaagatttt
gtatcatgggacacaaagacaaacacatggattgctgcaaaacaacaggctgagttctct
aaaaacaaatggaacaataacaaagctgaactggagatcagaaagaactacctcaaccag
atttgtcctgagtggttgaagaaatatgtcaactatgggagaagctctctgatgagaaca
gatcgtccgtcagttaactttctccagaaggcgtcatcctctccagtcagttgccacgct
acaggtttctaccccaacagagctgaaatgttctggaggaaagatggagaggagattcat
gatggtgtggaaaaaggagagatcaagcccaacaatgatgggaccttccagatgagcgtt
aacatcgatctgtcatctgtcccgactgaagaccggaccaagtatgaatgtgtgtttcag
ctctctggggtcaatgaagacatgaccattagactggagaaaacaagaatcttgaccaat
gaatcaccaagtaacaccattttgatcatccctgttgttgctgctgtggctgttcttggt
ctcattgctgtgattggattcattatttacaagaagaggaacgccaagcgtccaccatct
cctgtggtacaagctctaattccagaggaaacccagtttcttccacaagcatga
DBGET
integrated database retrieval system
