KEGG   Xiphophorus hellerii (green swordtail): 116731887
Entry
116731887         CDS       T07363                                 
Name
(RefSeq) tumor necrosis factor-like isoform X1
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04010  MAPK signaling pathway
xhe04060  Cytokine-cytokine receptor interaction
xhe04150  mTOR signaling pathway
xhe04210  Apoptosis
xhe04217  Necroptosis
xhe04350  TGF-beta signaling pathway
xhe04620  Toll-like receptor signaling pathway
xhe04621  NOD-like receptor signaling pathway
xhe04622  RIG-I-like receptor signaling pathway
xhe04625  C-type lectin receptor signaling pathway
xhe04920  Adipocytokine signaling pathway
xhe05132  Salmonella infection
xhe05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    116731887
   04350 TGF-beta signaling pathway
    116731887
   04150 mTOR signaling pathway
    116731887
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    116731887
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    116731887
   04217 Necroptosis
    116731887
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    116731887
   04621 NOD-like receptor signaling pathway
    116731887
   04622 RIG-I-like receptor signaling pathway
    116731887
   04625 C-type lectin receptor signaling pathway
    116731887
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    116731887
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116731887
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    116731887
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xhe04052]
    116731887
   00536 Glycosaminoglycan binding proteins [BR:xhe00536]
    116731887
Cytokines and neuropeptides [BR:xhe04052]
 Cytokines
  Tumor necrosis fators
   116731887
Glycosaminoglycan binding proteins [BR:xhe00536]
 Heparan sulfate / Heparin
  Cytokines
   116731887
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 116731887
NCBI-ProteinID: XP_032437672
LinkDB
Position
13:complement(26091112..26094798)
AA seq 245 aa
MESEFKVLLDADASTGTSDQTQTSTRVKTFQVSRLTLALMAFTLCLATGGAVFLFSNARV
KSEGSDEGSSAFHHALRQISNRRAAIHLEGEHDPAINTSVKWMSKVNQAHSQGGLELKDN
EILIPHNGLYFVYSQASFRVSCSSNADDLTSNHMIHLSHTVKRWSRSFGSNDESSYRTLL
HSVRTVCQGTASKDPDSAGSRFTAVYMGAVFDLKSGDRLKTVMEEKMLEKLEEDAGKTYF
GVFAL
NT seq 738 nt   +upstreamnt  +downstreamnt
atggagagtgaattcaaggtgttactggatgcagatgccagcacagggacaagtgatcag
actcagacatccacgagagtcaaaacatttcaagtgtccagacttaccttggccctgatg
gctttcactctctgccttgctactggtggtgctgttttcctcttctctaatgctcgtgtc
aagagtgaaggatcagatgagggaagctctgcttttcatcacgccttaagacaaatttca
aacaggagggcagccattcatctagaaggagaacacgaccccgccataaatacgtcagtg
aagtggatgagcaaagtgaaccaggcacactctcaaggaggtctagaactaaaagacaat
gagattttgattcctcataatggcctctactttgtttacagccaggcgtcgttcagagta
agctgcagcagcaatgctgatgaccttacttccaatcacatgatccacctgagtcacaca
gtgaaacgctggtccagatcatttggctctaatgatgagagttcctatcggaccctcttg
cattcagttcgtactgtgtgccagggtacagccagtaaggatccagactcagctggaagc
cggttcactgcagtatatatgggagcagtattcgacttaaagagtggggacagactgaag
acggttatggaagagaagatgcttgagaaactcgaggaagatgcagggaagacttatttt
ggtgtctttgccttgtaa

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