Xiphophorus hellerii (green swordtail): 116732017
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Entry
116732017 CDS
T07363
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00310
Lysine degradation
xhe00514
Other types of O-glycan biosynthesis
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116732017 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
116732017 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xhe01003
]
116732017 (plod3)
Enzymes [BR:
xhe01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
116732017 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
116732017 (plod3)
2.4.1.66 procollagen glucosyltransferase
116732017 (plod3)
Glycosyltransferases [BR:
xhe01003
]
O-Glycan biosynthesis
O-linked Gal type
116732017 (plod3)
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Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Motif
Other DBs
NCBI-GeneID:
116732017
NCBI-ProteinID:
XP_032437835
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Position
14:complement(28823313..28830283)
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AA seq
732 aa
AA seq
DB search
MASCRLLWLTAVCFLSSAWAEQRKLSAENLLVVTAATEETDGFRRFVKTAAQFNYSLKVL
GLGEEWKGGDVARTVGGGQKVRWLKEELLKNSEEQQLVVMFVDSYDVILAAGPDELLTRF
SSLGHRVVFSAEGFCWPDQRLASKYPQVHSGKRYLNSGGFIGFSSDLAAIVQQWKFRDND
DDQLFYTRIYLDQKQRTRFNMTLDHRSRIFQNLNGAIDEVVLKFERSKVRVRNVAYDTLP
VVIHGNGPTKLQLNYLGNYVPTAWTYEHGCGGCDDDLLLLGDQQDVDLPLVFLSVFIEHP
TPFLDEFLQRLVTMNYPKTRIRLFIHNNVVYHEQHIQRFWERHRLLFPDAVLVGPEENLP
EEKARTMAIEACQKNPGCDYFFSIDSDVALTNPDTLRILMEENKSVIAPMLSKHGKLWSN
FWGALSPDGFYSRSEDYIEIVQGKRVGLWNVPYITQVYLVKGSVLRSKLSQVSLFVDEGM
DPDMVFCRTIRDQGIFMFVSNRDEFGRLVASATFNTSRLHPDMWQIFDNPLDWREKYVHE
NYSKIFEEASGMVEQPCPDVYWFPAFSEKMCDHLVETMEDNGQWSGGSHKDERLAGGYEN
VPTVDIHMNQIGFEKEWLKFLKDYIAPVTEKLYPGYYPKAHSIMNFVVRYRPDEQPSLRP
HHDSSTFTINIALNRKGVDYQGGGCRFLRYDCKVESPRKGWSFMHPGRLTHYHEGLPTTQ
GTRYIMVAFVDP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgtcggcttctctggctcactgccgtctgcttcctcagctccgcgtgggcc
gaacagcggaagctctcagcagaaaatctgctggtcgttaccgcggcaacagaggagaca
gacggcttcaggcgcttcgtgaagacggcggctcagttcaactacagcctgaaggtgctg
ggcctgggggaggagtggaagggcggagacgtggcccggacggtgggcggaggtcagaag
gtcaggtggctgaaggaggagctgctgaagaactcggaggagcagcagctggtggtcatg
ttcgtagacagctacgatgtgatcctggcggccggtccagacgagctgctgacccggttc
tcctctctgggccaccgggtcgttttctctgccgaggggttctgctggcccgaccagcgc
ctggcctccaagtacccccaggtgcattctgggaagcgctacctgaactctggaggtttc
atcgggttctcctcggacctggccgccatcgtccagcagtggaagttcagggacaacgac
gacgaccagctgttctacacccggatctacctggaccagaagcagaggacccggttcaac
atgactctggaccaccgatccaggatcttccagaacctcaacggagccatcgacgaggtc
gtcttgaagtttgagaggtcaaaggtcagagtgaggaacgtggcctacgacacgcttcct
gtggtcatccacggcaacggacccaccaagctgcagctcaactacctgggaaactacgtc
ccaacggcctggacctacgaacacggctgtggaggctgcgacgacgacctgctgttgcta
ggcgaccaacaggatgtagacctccctctggtcttcctgtcggtcttcatcgaacatccg
actcccttcctggacgagttcctgcagcgtctggtcaccatgaactaccccaagactcgg
atccgcctcttcatccacaacaacgtggtgtaccatgagcaacacatccagcggttctgg
gagcgccacaggcttctgttcccggatgcggttctggtgggacctgaggagaacctgccg
gaggagaaggccagaaccatggcgatcgaggcgtgccagaagaacccaggctgcgattac
ttcttcagcatcgactcggacgtggcgctgaccaacccggacacgctgcggatcctcatg
gaggagaacaagtccgtcatcgcccccatgctgtccaaacacggcaaactgtggagtaac
ttctggggcgctctgagtccggacgggttctactcgcgctccgaggattacatcgagatc
gtccagggcaagagggtcgggctctggaacgtcccctacatcacccaggtctacctggtg
aagggcagcgtcctgcggtccaaactctcccaggtcagcctgtttgtggacgaaggaatg
gacccggacatggtgttctgcagaaccatcagagaccagggcatcttcatgttcgtctcc
aaccgagacgagttcggccggctggtggcgtccgccaccttcaacacctccagactccat
ccggacatgtggcagatcttcgacaacccactggactggagggagaagtacgtccacgag
aactactccaagatctttgaggaggccagcggcatggtggagcagccctgtccagatgtc
tactggttcccggccttctctgaaaagatgtgtgaccatctggtggagaccatggaggac
aacggccagtggtccggagggtcccacaaggacgagcgtctggccggcggctatgagaac
gtccccaccgtggacatccacatgaaccagatcggcttcgagaaggaatggctcaagttc
ctcaaggattacatcgcccccgtcaccgagaagctgtaccctggatactaccccaaggcc
cactccatcatgaactttgtggtccggtaccgtccagacgagcagccgtctctgcggccg
catcacgactcgtccaccttcaccatcaacatcgccctgaacaggaagggcgtcgactac
cagggtggaggctgcaggttcctgcgctacgactgtaaggtggagtctcccaggaagggc
tggtccttcatgcatcccggccgcctcacccactaccacgagggcctgcccaccacccag
ggcacccgctacatcatggtggccttcgtcgacccctga
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