Xiphophorus hellerii (green swordtail): 116732698
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Entry
116732698 CDS
T07363
Name
(RefSeq) transcription factor p65-like
KO
K04735
transcription factor p65
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04137
Mitophagy - animal
xhe04210
Apoptosis
xhe04218
Cellular senescence
xhe04620
Toll-like receptor signaling pathway
xhe04621
NOD-like receptor signaling pathway
xhe04622
RIG-I-like receptor signaling pathway
xhe04623
Cytosolic DNA-sensing pathway
xhe04625
C-type lectin receptor signaling pathway
xhe04920
Adipocytokine signaling pathway
xhe05132
Salmonella infection
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116732698
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116732698
09143 Cell growth and death
04210 Apoptosis
116732698
04218 Cellular senescence
116732698
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116732698
04621 NOD-like receptor signaling pathway
116732698
04622 RIG-I-like receptor signaling pathway
116732698
04623 Cytosolic DNA-sensing pathway
116732698
04625 C-type lectin receptor signaling pathway
116732698
09152 Endocrine system
04920 Adipocytokine signaling pathway
116732698
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116732698
09171 Infectious disease: bacterial
05132 Salmonella infection
116732698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116732698
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
116732698
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
116732698
NCBI-ProteinID:
XP_032438917
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Position
14:complement(4613300..4631160)
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AA seq
629 aa
AA seq
DB search
MDGVYGWGMTPINPVQPATPYIEIIEQPKQRGMRFRYKCEGRSAGSIPGEKSNDTTKTYP
AIKVHNYSGPLRVRISLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRIHSFQNLGIQC
VKKKDVNEAITCRLQTSNNPFSIPEPKVWEEEFDLNSVRLCFQASITLPTGDMFPLPPVV
SQPIFDNRAPNTAELKICRVNRNSGSCRGGDEIFLLCDKVQKEDIEVRFYQDSWEGKGTF
SQADVHRQVAIVFRTPPYRDTNLSEPIKVKMQLRRPSDREVSEPMDFQFLPADPDEYRLS
EKRKRTGDMFQNLKLGSMLSTVSVPQDRRHINLARRPVAAKLSSMNTQAAAEVAPSASGL
KPFSYNQPGQLFSVQPKVEASSSISTATTNQTWKIMESLKLGPTNPVQTFTMSSVSAPSS
STASTAANNEYSTVNLSDLHEFFPNISSPMAEESAAPQGSAAAPQTGSTFPLQESQFRVD
PPLVDDEIPDFSNFTDAPVPGTLDSLNMDEFEDLLNPRLMSEGGSAASMLTSSQHGVLSS
SAAASHNGASSQNLPDHVNNPGSTYMNYPNSIANLLRNEDMIILASSTNNNQQPAVLDDF
DVLMSADEDRLISIFNSGSQAGFVSGHPT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgtgtacggatggggcatgacccctattaacccagtccaaccagcgacccct
tacatagagatcatcgagcagccgaagcagagggggatgaggttccgctataaatgtgag
ggtcgctcagctggcagcattcctggagagaaaagcaacgacaccactaagacctacccg
gccatcaaggttcacaactacagcggcccgctccgggtccgcatctccctggtgacaaag
aaccctccgcacaagccccacccccacgaactggttgggaaagactgcaaacatggctac
tatgaggccgacctgcaggagagacgaatccacagttttcagaacctgggcattcagtgt
gtgaagaagaaggatgtcaacgaggccatcacttgcagactgcagaccagcaacaacccc
ttcagcattcctgagcccaaggtgtgggaggaagagtttgacctgaattctgtgcgactt
tgcttccaggcgtccatcacccttcccacgggggacatgtttcctctgccgcccgtcgtc
tcgcagcccatctttgacaacagagccccgaacacagccgagttgaaaatctgcagagtg
aaccgtaactccggcagctgcagaggaggggatgaaatcttcctcctctgcgataaagtg
cagaaagaggacatcgaggtgcggttctaccaggactcctgggaggggaagggcacgttc
tctcaggctgacgtccaccggcaggtggccattgtgttccgcacgcctccctatcgcgac
actaacctcagcgagcccattaaggtgaagatgcagctcagacggccctctgaccgtgaa
gtcagcgagccgatggacttccagttcctacctgctgacccagatgaatacaggctgtct
gagaagagaaagcgtacaggagacatgttccagaacttgaagctgggatctatgttatca
actgtgtccgttccacaagacagacggcacataaacctcgcacggagaccagttgcagct
aaactgagttcaatgaacacacaagcagcagcagaggttgcaccttctgccagtgggttg
aaacccttctcatacaatcaaccaggacagctgttctcagtccagccaaaggttgaagca
tcttcgtccatctctacggcgactaccaaccaaacctggaagatcatggagagcttgaag
ctgggccccaccaacccggtgcagaccttcacgatgagctccgtgtcggccccttcctcc
tccaccgcctccaccgctgccaacaacgagtactccaccgtcaacctgtccgaccttcac
gagttcttccccaacatttcctcccccatggccgaggagtccgcggctcctcagggaagc
gccgccgccccacagactggcagcaccttccccctgcaggagtcccagtttcgggtagac
cccccgctggtggacgacgagatcccggacttctccaacttcaccgacgctccggtgcca
ggcaccctggacagcctcaacatggatgaattcgaggaccttctgaacccgcgcctaatg
agcgagggcggatctgccgcgtccatgctgacatcttcccaacatggagtcctctccagc
tcggctgctgcgtcccacaacggcgcctcgtcccagaacctcccagaccacgtcaacaac
ccaggaagcacctacatgaattaccccaacagcatcgccaacctgctccggaacgaggac
atgatcatcctggcgtccagcaccaacaacaaccagcagcccgccgtgctggatgacttc
gacgtgctgatgtctgccgacgaagaccgcctcatctccatttttaacagcgggagccaa
gctggctttgtgtcaggacacccaacttaa
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