Xiphophorus hellerii (green swordtail): 116732822
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Entry
116732822 CDS
T07363
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xhe04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116732822
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116732822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116732822
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Nectin family
116732822
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
V-set
ig
Ig_2
C2-set_2
2CompART
LapA_dom
Lectin_N
Ig_5
Helicase_IV_N
Motif
Other DBs
NCBI-GeneID:
116732822
NCBI-ProteinID:
XP_032439210
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Position
14:3332370..3352950
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AA seq
605 aa
AA seq
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MTSLLYRFSLGLLGLQIFVMGVQGQSEDAPSKVSFTTLEEKETVLPCPYELNEEKVVQVT
WYKIGSDENKEQMITVHMTDGQYVSEKWKDRVHFKSNQPIVDSTLVITSTKPSDESDYLC
QITLFPSGSIDKEMHLTVQTIPISSLDPVYVKEGDSYKVVASCRSVAVPPPELSWDTELN
GHAVKQISDKGVVSTHFSLHPLRSMNGKKLDCLVQHPVYDKPRRIQNQLVVHFPPNAEVS
GYSKKWSVGMENAALTCKHAGSPEPVLTWTRLGGQLPSGAVPHPDGRLVFERPLNTNDSG
TYQCLVKNSEGEDKDTVTIALGAETTIDLKKLMFIIAGGAAAGLLILMLVLTCHHQRKNK
KLKKELTQKKEEISTLSRQASFRRVNSVSTDARDVLLELDEHHPLRVEGTLRNSLSSLGV
SLQINEQARCRDSRSTVSGGRGGGAPAFDSLGRPSIYNNSRRGRDRPMDRDSETRLRVEQ
YVRNSNMSLQDPRLLPPLLQPTYPVVRSTEIIRQMNGNAVIPTEGGSHSGSAIRNYQPPP
ISCTYQQVAYDEDEIDEGLGGPASQEHPDDQDSVASSSNFSKNRISPQPHNHNPHTSYVH
KAQIV
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacatctctgctctacagattctcattgggtctccttgggctccagatcttcgtgatg
ggggtacagggacagtctgaggacgctccatcaaaggtttcctttacgactttggaggag
aaagagaccgtcctgccctgcccgtacgagctgaacgaagagaaggtggtgcaggtcacc
tggtataagataggctctgatgagaacaaggagcagatgattactgtacacatgaccgat
ggccagtatgtgtccgagaagtggaaagaccgcgtgcactttaagagcaatcaacccata
gtggattcgactctggtcatcaccagcacaaagccctccgatgaaagcgattacctctgt
cagatcactcttttcccatctgggagcattgacaaagagatgcatctcaccgtgcagacc
attcctatcagctccttggatcctgtctatgtaaaggagggcgattcctacaaggtggtg
gcctcctgtcgctctgtggccgtcccacctcctgagctctcctgggacacagaactgaac
ggtcatgctgtcaaacagatctctgacaagggggttgtctccacacacttctctctgcac
cctctgaggagtatgaatggaaagaagctggactgcctggttcagcatccagtatatgac
aaaccgcgcaggatccaaaatcaactggtggtgcactttcctccaaacgctgaggtgtct
ggctacagtaaaaaatggtctgtcggtatggagaatgctgccctgacgtgcaaacatgca
ggaagccctgaaccagtcctcacttggaccagattaggtgggcagcttcctagcggtgca
gttcctcaccccgatggaagactcgtctttgagcgaccccttaacaccaacgactccggc
acctatcagtgcttggtgaagaactcagagggtgaagataaggatactgtgaccatcgct
ttaggagcagagaccacaatcgatctcaagaagttgatgttcatcattgcgggaggcgcg
gcggccggcctgctgattctcatgctcgtcctcacttgtcaccaccaacgcaagaacaag
aagctgaagaaggagctgactcagaaaaaagaggaaataagcactctgtccagacaagct
tcgttcaggagggtgaactctgtcagcactgatgccagagacgtgttactagaacttgac
gaacaccaccctctgagggtggagggaaccctgaggaacagcctgtcatccctcggggtc
agtctacagatcaatgaacaggcccgttgccgtgacagcagatcaactgtctcaggtggg
cgcggaggaggggctcccgcgtttgactctttaggcagaccgtccatctacaacaactcc
cggaggggaagggacaggcctatggatcgggacagcgaaacccggcttagagtagagcaa
tatgtgagaaacagcaacatgtccttgcaggaccctcgattgcttcctcctctgctgcaa
ccgacatatcccgtggtccgctcaacggagatcataagacagatgaacggcaatgccgtc
atcccaacagagggaggttcccattcagggagcgccataaggaactaccagccccctccc
ataagctgcacataccaacaagtggcgtacgatgaggatgagatcgacgaagggctggga
ggccctgccagtcaggagcatcctgacgatcaggatagcgttgcctccagctcaaatttc
tcaaagaacagaataagccctcagcctcacaatcataacccccacacttcatacgtccac
aaggcccagattgtttag
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