Xiphophorus hellerii (green swordtail): 116735405
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Entry
116735405 CDS
T07363
Name
(RefSeq) H-2 class II histocompatibility antigen, A-S alpha chain-like
KO
K06752
MHC class II antigen
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04145
Phagosome
xhe04514
Cell adhesion molecules
xhe04672
Intestinal immune network for IgA production
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116735405
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116735405
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116735405
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116735405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116735405
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116735405
Exosomal proteins of epithelial cells
116735405
Exosomal proteins of breast milk
116735405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
C2-set_2
Ig_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
116735405
NCBI-ProteinID:
XP_032443172
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All DBs
Position
16:14508526..14510403
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AA seq
281 aa
AA seq
DB search
MRKFRPAGTGVRLVKSRFHCMFRAKPVRVTMGRQRRSNNLCFVLLLLFFGARFVCAAGSH
QFCFTYGCFDSSDTELYVTLDDDKLYYADFKNNASVWDSKIETMKYKYTYTTSKYAAIYR
TMCKKDIHRWKPDPDVRRTKDPPDVMMYSKDEVIEDVENTLVCFANNFFPPAINIRWTRN
DKQVAVEDPFVKTISNSEGAFHVFSYLNFVPKQGDIYSCTVEHEALEEPKTRFWDVETEK
MSMGPSVFCALGLTLGLLGIAAGTFLFVKGNQYCYNADIVG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagttcagacctgcaggaaccggagtccgtctggtgaaatcacgttttcactgc
atgtttagagcaaagccagtgagagtcacgatgggacgccagcggagatcaaacaatctg
tgcttcgtacttctcctacttttctttggagcacgtttcgtctgtgctgcagggagtcac
caattttgttttacctatggttgctttgactcaagtgacaccgagctctatgtgacatta
gacgatgataaattgtattatgcagattttaaaaacaatgctagcgtctgggatagcaaa
atagaaactatgaaatataaatatacatacactacaagtaaatatgcagcaatataccga
accatgtgtaagaaagatatacatcgatggaaaccggacccagacgttagaaggactaaa
gacccaccagacgtgatgatgtactccaaagatgaagtgattgaagatgtagagaacacc
cttgtgtgttttgccaacaactttttcccacctgcaatcaacatcaggtggaccaggaat
gacaaacaggtggcagtggaagatcccttcgtcaaaactatttccaactctgaaggggcg
tttcatgtcttctcctacctgaactttgttccaaagcaaggagacatttacagctgcact
gtggaacatgaagccctggaggagcctaagaccaggttttgggacgttgaaacagagaag
atgagtatgggtccatccgtcttctgtgcacttggcctgactcttgggcttcttggaatt
gctgcaggaactttcttgtttgtgaaaggaaaccagtattgttacaacgcagacattgtt
ggttaa
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