Xiphophorus hellerii (green swordtail): 116736692
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Entry
116736692 CDS
T07363
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04260
Cardiac muscle contraction
xhe04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116736692
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116736692
04261 Adrenergic signaling in cardiomyocytes
116736692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116736692
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116736692
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
116736692
NCBI-ProteinID:
XP_032445231
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Position
17:5999526..6092161
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AA seq
1099 aa
AA seq
DB search
MDYSLCMLVLLTTLSSVSPGQFPTSQIIKDWVFQIQKDLITLTDKASGLEDLIKIYHKHK
THFSVESNDARKLVATAAGNIDKLLANRSEALKRLATEAEKFQKEHEWTVDGEANELKYY
NAKDGVNKTALKEKEKDKDKEEDKSNRFIPEDFEIDPDFKRLVSYNTTAVHIPTDIYEGS
TIILNELNWTDELEDVFRQNKEDDPSLLWQVFGSATGLARYYPASPWNDKRSSPDKIDLY
DVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIKTSVSWMLETLSDDDFVNVVSFNK
TARPAACFQNLVQANVRNKRVLKEAVHRLKAEGITNYTSGFELAFEQLAQTNVSRADCNK
IIMLFTDGGEERAEEIFQKYNPKQEVRIFTFSVGQHSYDKGPIQWMACNNKGYYYEIPSI
GAIRLNTQEYLDVLGRPMVKADSGPKRGRKASKQVQWTNVYLDALELGLVITGTLPVFNK
TDTGSKKSQNQLILGVMAIDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLT
AKFDEPVTLDFLDAELENDIKVEMRNKMIDGKTGNYTISTLVKSQDERYIDEGERTYTFA
PVRGTDYSLALVLPNYSMHYIRATIGDTITQAKSFLGKDVSESLLADKFDEYGYTFIAPR
MYCKDLKPPDKETNNTEYLMDFNNYIDTKTPNNPMCNVELVNRLLLDAGITSDLIKIWKR
NELQQGVIARFVATDGGITRVFPKSAGLDWKEDAETYESSFYKRSLDNDVYIFTPTRCTE
SDNDVLVSRAVNLEINNITLKPAVVGVKLDIYAWMESFINITYRMNCKDEICGCKKGDPY
IDCVVLDDGGFMVMSNQEDYLNQIGCFFGIIDPDLMRTLVNSSLFTAKSTYDYQSLCEPK
RESKAAAGLRSIYVPTIADILNLGWWATAAAWSIVQQLLVSITLPNVLDAAETDDQVSDA
MSKEVCITEQTQYFFENDETSFGGLFECANSTRQYLAEKVPNTNLVLIISDRQQGNSQSC
GLGPLVQDEKQSAGPDPCEMALSPRYRKGPIVCFDKTEHEEDPDCGGVSGLTPSLWLMVV
IQVVLLWAVTDSRHYAIPS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggattactctctttgcatgttggttcttctgacgactctttcgtctgtttcgcccgga
caattcccaacatcccagatcataaaagactgggtgttccagattcaaaaagacttgatc
acattaacagacaaagccagtgggctggaggacctaataaagatatatcataaacacaaa
acccacttcagcgtggaatccaacgacgcaagaaagctggtggcaacggctgcaggaaac
atagataaactgctagctaatcgctccgaagccctaaagagacttgcaactgaggccgaa
aaatttcaaaaggaacatgagtggacagtcgacggtgaggctaacgaactcaagtactac
aatgccaaagatggcgtaaataagaccgcattgaaagaaaaagaaaaagataaagataaa
gaagaggacaagagcaacaggttcattccagaggactttgaaatagaccccgacttcaaa
cgtctcgtctcttacaacaccactgccgtccacatccccactgacatatacgaaggctcc
accatcattttgaatgagctgaactggacagacgagttggaggatgttttccgacaaaac
aaagaggatgatccctcactgctctggcaggttttcggctccgctactggactggctcgg
tattacccagcttccccctggaacgacaagagaagttcacctgacaaaattgacctgtat
gacgtacgcaggcgaccttggtacattcagggggcggcgtcacccaaggacatgctgatc
ctagtggatgcgagtggaagtgtatcaggcctcaccctgaaactgatcaaaacctcagtc
agctggatgctggagaccctctccgatgatgacttcgtaaacgtagtgtctttcaacaaa
accgccaggcctgcagcatgctttcagaacctggtgcaggccaatgtgaggaacaaaagg
gtcctgaaggaggcagtgcacagactcaaagccgagggcatcaccaactacacaagtggc
tttgaactcgcctttgaacagcttgcacagaccaatgtgtcgagggccgactgcaacaag
attataatgctgttcactgatggaggagaggagagggctgaggaaatctttcaaaaatac
aacccaaagcaagaggtgcgcatctttactttctccgtaggccagcacagctacgacaaa
ggcccaatacagtggatggcctgcaataataaaggttattactatgagattccatctatt
ggggccattcggctgaacactcaggagtacttggacgttttgggtcggccaatggtcaaa
gctgacagcgggcccaagagaggccgaaaggccagtaagcaagtccagtggacaaatgtc
tacctagatgcactggagctgggtcttgtaatcaccggaacactgcccgtcttcaacaag
actgacacaggctcaaagaagtcacaaaaccagctcatcctgggagttatggctattgat
gtctccttagaagatatcaagagacttacgcctcggttcacatttggtccaaatggttac
tactttgctattgatccaaatgggtatgtgttgctccaccctaatcttcaaccgctgact
gccaagtttgatgaacctgtaacactcgactttctggatgcagagttggagaatgacatc
aaagtggagatgagaaataaaatgattgatgggaaaacgggaaactacacaatatctaca
ctggtgaaatctcaagatgagcgctacattgacgaaggtgagaggacctacactttcgct
cctgtgaggggaacagactacagcctggccctggtcctgccaaactacagcatgcactac
atccgtgcaaccataggcgacacaattacccaggcaaaatcatttttggggaaagatgtt
tctgagagcctgcttgcagacaagtttgatgagtatgggtatacatttattgcaccaagg
atgtactgcaaagacctgaagccgcctgacaaggaaacgaacaacacagagtacctgatg
gacttcaacaattatattgacacaaagactccaaacaaccctatgtgtaatgtggagctt
gtaaaccggcttctccttgatgccggcatcacctctgatctgatcaagatctggaaacgg
aatgagttgcagcagggtgttattgccagatttgttgcgactgatggaggaatcactcgc
gtcttccccaaaagtgccgggctggactggaaagaagacgcagagacctacgaatcgagt
ttttacaagcgaagtttagacaatgacgtgtacatctttactccaactcgctgcaccgaa
agcgataacgatgtactcgtgagccgagcagtaaacctcgaaattaacaacattacactc
aagccagctgttgtgggtgtgaagttggacatctatgcatggatggagagcttcatcaac
atcacttacaggatgaattgcaaggatgaaatctgtggttgtaagaaaggtgatccgtat
atagactgtgtcgttctggatgacggggggttcatggtgatgtccaatcaagaggactat
cttaatcagattggctgtttctttggtatcatcgaccctgacctcatgagaactctggtc
aactcgtcactgttcaccgccaagagcacctacgactaccagtctctctgtgagcccaag
agagagagcaaagcggctgcaggcctgcgatccatttatgtgcccacaatagcagatata
ttgaatttgggatggtgggcgacagctgcagcctggtcaattgtgcaacagttgctggtc
agcatcacattaccaaatgttttggatgcagctgaaacggacgatcaagtgtcggatgca
atgtctaaggaggtgtgcatcacagagcaaacgcagtacttctttgagaacgatgagaca
tcatttggaggcttatttgagtgtgcaaactccaccaggcaatacctagctgaaaaggtg
ccaaatacaaacctggtcttaatcattagtgacagacaacaaggcaacagccagtcgtgt
ggattggggccattagtacaggatgaaaagcagtctgctgggccggatccttgtgaaatg
gctctcagtcctcgctacaggaaaggcccaatagtttgctttgataaaactgagcacgag
gaggatccagactgtggcggggtgtccggcctgaccccctcactttggctgatggtggtc
attcaggtggtgttgctctgggctgtgactgattccaggcactatgccatcccatcatga
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