Xiphophorus hellerii (green swordtail): 116736905
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Entry
116736905 CDS
T07363
Symbol
mdm2
Name
(RefSeq) E3 ubiquitin-protein ligase Mdm2 isoform X1
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04068
FoxO signaling pathway
xhe04110
Cell cycle
xhe04115
p53 signaling pathway
xhe04120
Ubiquitin mediated proteolysis
xhe04144
Endocytosis
xhe04218
Cellular senescence
xhe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116736905 (mdm2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116736905 (mdm2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116736905 (mdm2)
09143 Cell growth and death
04110 Cell cycle
116736905 (mdm2)
04115 p53 signaling pathway
116736905 (mdm2)
04218 Cellular senescence
116736905 (mdm2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116736905 (mdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116736905 (mdm2)
04121 Ubiquitin system [BR:
xhe04121
]
116736905 (mdm2)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116736905 (mdm2)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116736905 (mdm2)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
116736905 (mdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Zn_ribbon_RanBP
SWIB
zf-RING_2
FAM117
Motif
Other DBs
NCBI-GeneID:
116736905
NCBI-ProteinID:
XP_032445669
LinkDB
All DBs
Position
17:758330..767307
Genome browser
AA seq
504 aa
AA seq
DB search
MSPLICARWAAEARSAVNSATSITMSADGEFANENKLVRPKVEFGSLLQHAGATKDVFTI
KEVMFYLGQYIIQRQLYDQNQQHIVHCAQDALGRVLGVDSFSVKEPRVLFAMITKNLEAV
RNQDSTTDLSEADSSQTEGAESSSSSTDQRRRRRRRSNSGPSHSTEGEEEERQSEDEESD
DSRKRRRSDSFSLTFDGSLSWCVIGGLGSGRDNRGSQSSDSHSVRSGRSEVTIAASDSDS
DNFSVEFEVESVDSDDYNEDDASLSADDQVYEVTIFEADGDDDSFDDDTEITEAFCGFHS
QDYWRCSTCDELNPPLPRNCFRCWTLRHDWLPEASADPKALPTKPTDQSAAKETPGLDVE
DDDGVDVPDGKRAKTPLNSQSWSDCSAPNSQNALCSSQPSSASSSQEKLWTPESQPESQP
SSSGDSQDPVPDLERSVSAESRLPDSCLDPCLICQSRPKNGCIVHGRTGHLMSCYVCARK
LKRRNKLCPVCRMPIQSVVLTYLS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcccactcatctgtgcaagatgggctgctgaggccagatctgctgtgaactcagca
accagcatcaccatgtcagctgacggagagttcgccaatgaaaacaagctggtgagaccg
aaggtggagttcggctctctgctgcaacacgccggagccaccaaagacgttttcaccata
aaggaggtcatgttctacctgggtcagtacatcatccagaggcagctgtacgaccagaac
cagcagcacatcgtccactgcgctcaggacgctctgggccgggttctgggcgtagacagc
ttctccgtgaaggaaccaagggttttgtttgcaatgattaccaagaacctggaggccgtg
aggaaccaagattcgacgacggatttgagtgaagctgacagcagccagacggagggagct
gagagttcatcttcatccacagaccagaggaggaggaggaggaggaggagcaactcaggt
ccgtcccacagcacagagggagaggaagaggagcggcagtcggaggacgaagagtcggac
gacagcaggaagcggcggcgctcggacagcttctcgctgaccttcgacggcagcctgtcc
tggtgcgtgattggagggctgggaagtgggcgggacaaccgcggcagccagtcgtccgac
tcccacagcgtccggtccgggaggtcggaggtcacaatcgcggcgtccgactcggacagc
gacaacttcagcgtggagttcgaggtggagtcggtcgactcggacgactacaacgaggac
gacgcgtcgctgtccgccgacgaccaggtttatgaagtcaccatcttcgaggcggacggc
gacgacgactcgttcgacgacgacacggagatcacagaagctttctgtgggtttcactct
caggattactggcgctgctccacgtgtgacgagctgaacccaccgctgcccagaaactgc
ttccgctgctggacgctgcgtcacgattggctgccggaggcgtccgccgaccctaaagcc
ctccccaccaagcccaccgaccaatcagctgccaaagaaactccaggtttggatgtggag
gacgacgacggcgtcgacgttcctgatggaaaaagagcaaaaactcctctgaactcccag
agttggtccgactgctccgccccaaactcccagaatgccctttgctcctcccagccttcc
tccgcctcttcctcccaggagaagctctggacgcccgagtcccagcccgagtcccagccg
tcgtcgtcgggcgactcccaggacccggtgccggacctggagcgcagcgtgtcggccgag
tcccggctgccggactcgtgtctggacccgtgtctcatctgccagtcccgacccaaaaat
ggctgcatcgtccacgggcggaccggacacctcatgtcctgctacgtctgcgccaggaag
ctgaagaggaggaacaagctgtgccccgtctgcaggatgcccatccagtccgtcgtcctg
acctacctgagctga
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