Xanthomonas hyacinthi: FZ025_14140
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Entry
FZ025_14140 CDS
T06345
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy01501
beta-Lactam resistance
xhy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FZ025_14140
01503 Cationic antimicrobial peptide (CAMP) resistance
FZ025_14140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhy03036
]
FZ025_14140
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_14140
01504 Antimicrobial resistance genes [BR:
xhy01504
]
FZ025_14140
Chromosome and associated proteins [BR:
xhy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FZ025_14140
Transporters [BR:
xhy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FZ025_14140
Antimicrobial resistance genes [BR:
xhy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FZ025_14140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
BSH_CusB
HH_AAEA_pHBA
BSH_CzcB
HH_EMRA
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QGY77727
LinkDB
All DBs
Position
complement(3193947..3195125)
Genome browser
AA seq
392 aa
AA seq
DB search
MSLFSPSRLLIAGLLPVVLASCSKEGAPVARAGQPEVVVVTLQPQPVTLTRELPGRVAPS
LIAEVRPQVNGIVARRLFTEGGRVQAGQALYQLDDASYRATFNNAEANLARAQATVANAR
LTQKRTADLARIEAVSQQDNDDALASLRQAEADLKAAQANTDGSAVTLGFARITSPISGQ
IGRSSVTQGALVTANQSAALATVQQLDPIYVDLSQSSAELLALRKELSSGSLKDGGALPV
SILLEDGTPYAHSGKLAFSEMTVDPTTGSFSLRVVVKNPDQLLMPGMYVRAIVGNGTRQE
ALLVPQQGVARGPKGDATVMVVDKGGKVEQRAIQANRTVGDKWLVDGGLAAGDKVIVEGL
QKIQPGIAVKTTEAKAAPAPAGSPAASAAGVR
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgttttctccctctcgtctgcttatcgcgggcctattacccgttgttctcgcc
agttgcagcaaggagggcgcgcccgtagctcgcgcaggccagccggaggtcgtcgtcgtc
actttgcagccacagcccgtgaccttgacgcgggagctgcctggtcgtgtggctccgtcc
ttgatcgccgaggttcggccgcaggtcaatggcatcgtcgcgcggcgcctgttcaccgaa
ggcggacgcgtgcaggccggccaggccctctaccaactggacgatgcgagttaccgggcc
accttcaacaacgccgaagccaacttggcgcgggcgcaggccaccgtggccaatgccagg
ctgacgcagaagcgtacggctgacctcgcgcgtatcgaagcggttagccagcaggacaac
gacgatgccctggcgtcactgcgtcaagccgaagcagatttgaaggccgcgcaggccaac
accgatggcagcgccgtcaccttaggctttgcacggatcacctcgcccatcagcggccaa
atcggccgatcgtccgtaacgcaaggtgcgctggtcacagccaaccaaagtgcggcactc
gcgacggtgcagcaactggacccgatctatgtggacctcagccagtccagcgcagaactg
ctagccctgcgcaaggaattgtcttctggctcactgaaggacggcggcgcgttgcctgtc
tcgatcctgctcgaagacggcacgccctatgcgcacagcggcaaactggccttctcggag
atgacggtcgacccaacgacgggaagtttttccttgcgtgttgtcgtcaagaacccggac
caacttctcatgcccggcatgtacgtacgtgccatcgtcggcaacggaacacgccaggag
gccctgttggtccctcagcaaggcgttgctcgcggtccgaagggtgatgccaccgttatg
gtggtcgacaagggcggcaaggttgagcagcgcgccatccaggcaaaccgcaccgtgggc
gacaagtggcttgtggatggcgggctggccgcaggtgacaaggtcatcgtggaaggtctg
caaaagatccagcccggcatcgcggtgaagacgaccgaagccaaggccgctcccgctcca
gcgggctccccggcagccagcgccgccggcgtgcgctga
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