Xanthomonas hyacinthi: FZ025_17075
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Entry
FZ025_17075 CDS
T06345
Symbol
dksA
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
xhy
Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhy03000
]
FZ025_17075 (dksA)
03021 Transcription machinery [BR:
xhy03021
]
FZ025_17075 (dksA)
03009 Ribosome biogenesis [BR:
xhy03009
]
FZ025_17075 (dksA)
Transcription factors [BR:
xhy03000
]
Prokaryotic type
Other transcription factors
Others
FZ025_17075 (dksA)
Transcription machinery [BR:
xhy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
FZ025_17075 (dksA)
Ribosome biogenesis [BR:
xhy03009
]
Prokaryotic type
rRNA transcription factors
FZ025_17075 (dksA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
QGY78264
LinkDB
All DBs
Position
3870619..3871686
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AA seq
355 aa
AA seq
DB search
MAAKKPVKKAVKAAKKPVQPVAKKATASTAAKPLKKPVVKPASTPAPAKKAPAKAVAKKP
VARPAAALAKKAAARPAAKPATAAKSSATPAAKPATPVAKPKQATAPVAAPAVSKSVPKP
AAKPAPAKSVPAKAATPAAAPVSKPVAAKPAAPSAPPHKNPVSVSKSSAKTPTKSESTPK
APIAKPTGKVAVAVTAKSNTPAKPAKHKVVEYKTDEATGRPILPKGYKPASDEEYMSTLQ
QEYFRQRLLSWRADLVEESKQTIENLRDEVRDIGDEAERATRETENSLELRTRDRYRKLI
GKIDSTLKRLDAGDYGYCVDTGEEIGLERLDARLTAERTIDAQERWEHLQKQQGE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctaaaaaacctgtaaagaaggccgtcaaggccgccaagaagcccgtccagccc
gttgccaagaaagcgacggcgtccactgctgccaagccgctgaagaaaccggtggtcaaa
ccggcgtccacgcctgcgccggcgaagaaggcgccagccaaggcggtggcgaagaagccg
gtggccaggccggccgctgcgcttgccaagaaagccgcggccaggccggccgccaagcca
gcgaccgccgccaaatccagcgcgacgccggcagcgaagccggccacgcccgttgcaaag
ccaaagcaggccaccgccccggtcgccgccccggcggtgtccaaatccgtaccgaagccg
gctgccaagccggcgccggccaagtctgtcccggccaaggccgccacgcccgccgctgca
ccggtttccaagccggttgccgccaagcccgccgcgccctcggccccgccacataagaat
cccgtgtccgtttcgaaatcctccgcgaaaacccccaccaaatccgaatccacccccaag
gcgccgatcgccaagcccaccggcaaggtcgccgtcgcggtgaccgccaagtccaacacg
cccgccaagccggccaagcacaaggtggtcgagtacaagaccgacgaagccaccggtcgc
ccgatcctgcccaagggctacaagccggcgagcgacgaggagtacatgagcacgctgcag
caggagtacttccgccagcgcctgctcagctggcgtgccgatctggtcgaggaatccaag
cagaccatcgagaacctgcgcgacgaagtccgcgacatcggcgacgaggccgagcgcgcc
acccgcgagaccgaaaactcgctggaactgcgcacccgcgaccgctaccgcaagctgatc
ggcaagatcgacagcacgctcaagcgcctggatgccggcgactacggctactgcgtcgac
accggcgaggaaatcggcctggagcgcctggacgcgcgcctgaccgccgagcgcaccatc
gacgcgcaggagcgctgggagcacctgcagaagcagcagggcgagtga
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