Xanthomonas hyacinthi: FZ025_17885
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Entry
FZ025_17885 CDS
T06345
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy01501
beta-Lactam resistance
xhy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FZ025_17885
01503 Cationic antimicrobial peptide (CAMP) resistance
FZ025_17885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_17885
01504 Antimicrobial resistance genes [BR:
xhy01504
]
FZ025_17885
Transporters [BR:
xhy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FZ025_17885
Antimicrobial resistance genes [BR:
xhy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FZ025_17885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QGY78416
LinkDB
All DBs
Position
complement(4056226..4059399)
Genome browser
AA seq
1057 aa
AA seq
DB search
MPKFFIEHPVFAWVVAILISLTGVIAILNLGIESYPSIAPPQVTVTATYPGASASTTERS
VTQVIEQQLTGIDHLLYFSSTSASNGNSTITLTFETGTNADIAQVQVQNKVSLASPRLPS
EVTAQGVVVAKASSGFLSVVAVQSDNPSIDRDALNDIVGARVLEQISRVPGVGSTQQFGA
EYAMDVWLNPEKLQGYHLSASDVYNAIGAQNVQFAAGAIGSDPAATGQSFTATVSAEGRF
SSPEQFENIILRADSNGTVVRLKDVARVAFGPNNFGFDTQYNGKPTGAFAIQLLPGANAL
NVSAAVKAKMDSLQASFPQGVSWFTPYESTTFVTISIEEVVKTLIEAIVLVFLVMLVFLQ
NFRATIIPTLVIPVALLGTFLGMWLIGFTINQLTLFAMVLAIGIVVDDAIVVIENVERIM
SEEHLAPKAATQKAMTQITGAVVAITVVLAAVFVPSALQPGAAGAIYKQFALTIAMAMGF
SAFLALSFTPALCAAFLKPTHNDNPNWMFRTFNKYYDKLAHRYVAAVGGTIRRAPRWMAV
FALLVVLCGFLFARMPSSFLPEEDQGFAIAIVQLPPGATKARTNEVFAQMRGVLAQQKAV
AGMLQITGFSFIGRGENVGMGFVRLKPWDERDITADQLIQQLNGMFYGIKGAQIFVVNLP
TVQGLGQFGGFDMWLQDRTGAGEEALLQARNILLGKAAARQDALTGVRPNGLENAPQLQL
NVDRVQAQSMGLSVNDVYQSIQLMLAPVYVNDFFYEGRVKRVNVQADAPYRTGPESLRNF
YVPSSSSTDSDGLPQMIPLSTVVKAEWIYGSPSLSRYNGYSAVNVVGNPAPGSSSGQAMS
AMEEIIRNDLPPSFGFDWSGMSYQEIIAGNSATLLLVLSIVVVFLCLAALYESWSIPVSV
LLVVPIGVLGAVTFSLLRGLPYDTYFKIGLITVIGLAAKNAILIVEFAVEQRAAGKTLRE
AATEAAHLRFRPILMTSFAFILGVLPMAISTGAGANARHSIGTGVIGGMVFATVLGVLFI
PLFFVVMRRMLGDKLDEPSKEYVAIQQEGQTRNQPDR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagttcttcatcgaacacccggtcttcgcctgggtggtggcgatcctgatctcg
ctcaccggcgtgatcgccatcctcaacctcggcatcgaatcctatccctcgatcgcgccg
ccgcaggtcaccgttaccgcgacctaccccggcgccagcgccagcaccaccgaacgctcg
gtcacccaggtgatcgagcagcagctgaccggcatcgaccacctgctgtacttcagttcc
acgtccgcgtccaacggcaactcgaccatcaccctgaccttcgagaccggcaccaatgcc
gatatcgcacaggtgcaggtgcagaacaaagtgtcgctggcgtcgccgcgcctgccttcg
gaagtaaccgcgcagggcgtggtggtggccaaggccagctccggcttcctcagcgtggtc
gcggtgcaatcggacaatccctcgatcgaccgcgacgcgctcaacgacatcgtcggcgcg
cgcgtgctggagcagatctcgcgcgtgcccggcgtcggcagcacccagcagttcggtgca
gagtacgcgatggacgtctggctgaaccccgagaagctgcagggctaccacctgtcggcc
agcgacgtgtacaacgccatcggcgcgcagaacgtgcagttcgccgccggcgcgatcggc
tcggaccctgccgcgaccgggcaatcgttcaccgccacggtctcggccgaaggccgcttc
agctcgcccgaacagttcgagaacatcatcctgcgtgcggacagcaacggcaccgtggtg
cggctgaaggacgtggcgcgggtcgcgttcggcccgaataacttcggcttcgatacccag
tacaacggcaagccgaccggcgcgttcgcgatccagctgctgcccggggccaatgcactg
aacgtgtcggcggcggtcaaggccaagatggattcgctgcaggccagcttcccgcagggc
gtgagctggttcacgccgtacgagagcaccaccttcgtcacgatttcgatcgaggaagtg
gtcaagaccctgatcgaagcgatcgtgctggtgttcctggtgatgctggtgttcctgcag
aacttccgcgccaccatcatccccaccctggtgatcccggtggcgctgctgggcacgttc
ctgggcatgtggctgatcggcttcaccatcaaccagctgaccttgttcgcgatggtgctg
gcgatcggcatcgtggtcgacgacgcgatcgtggtgatcgagaacgtcgaacgcatcatg
tccgaggagcacctggcgccgaaggcggccacgcagaaggcgatgacccagatcaccggc
gcggtggtggcgatcaccgtggtgctggcggcggtgttcgtgccctcggcgttgcagccc
ggcgccgccggcgcgatctacaagcagttcgcgctcaccatcgccatggcgatgggcttc
tcggcgttcctggcactgagcttcaccccggcgctgtgcgcggcgttcctgaagcccacc
cacaacgacaatccaaactggatgttccgcaccttcaacaagtactacgacaagctggcg
caccgctacgtcgctgcggtcggcggcaccatccgccgcgcgccgcgctggatggcggtg
ttcgcgctgctggtggtgctgtgcgggttcctgttcgcgcgcatgccgagcagcttcctg
cccgaggaagaccagggcttcgcgatcgcgatcgtgcagttgccgccgggcgcgaccaag
gcgcgcaccaacgaggtgttcgcgcagatgcgcggcgtgctcgcacagcagaaggccgtg
gcaggcatgctgcagatcaccggcttcagcttcatcgggcgcggcgagaacgtcggcatg
ggcttcgtgcggctcaagccatgggatgaacgcgacatcaccgcagatcagctgatccag
cagctcaatgggatgttctacggcatcaagggcgcgcagatcttcgtggtcaacctgccc
acggtacagggcctgggccagttcggcggtttcgacatgtggctgcaggaccgcaccggc
gccggcgaggaagcgctactgcaggcgcgcaatatcctgctgggcaaggccgctgcacgc
caggatgcgctgaccggggtgcgccccaacggcctggagaacgcgccgcagctgcagctg
aacgtggaccgcgtgcaggcgcagtcgatgggcctgtcggtcaacgacgtctaccaatcg
atccagctgatgctggcgccggtctacgtcaacgatttcttctacgaaggccgcgtcaag
cgggtcaacgtgcaggccgacgcgccgtaccgcaccggcccggagtcgctgcgcaacttc
tacgtgcccagcagcagcagcaccgacagcgacggcctgccgcagatgatcccgctgagc
acggtggtcaaggccgagtggatctacggctcgccatcgctgagccgctacaacggctac
tcggcggtcaacgtggtcggcaacccggccccgggcagcagttccggccaggcgatgagc
gcgatggaggagatcatccgcaacgacctgccgccgagcttcggcttcgactggagcggc
atgtcctaccaggaaatcatcgccggcaacagcgccacgctgctgctggtgctgtcgatc
gtggtggtcttcctgtgcctggcggcgctgtacgagagctggtcgatcccggtgtcggtg
ctgctggtggtgccgatcggcgtgctcggcgcggtcaccttctcgctgctgcgcggcctg
ccctacgacacttacttcaagatcggcctgatcacggtaatcggcctggcggcgaagaac
gcgatcctgatcgtggagttcgcggtggagcagcgtgcggcgggcaagaccctgcgcgaa
gcggctaccgaagcggcgcacctgcgcttccgcccgatcctgatgacctcgttcgcgttc
atcctcggcgtgctgccgatggcgatctccaccggtgccggcgccaacgcgcgccactcg
atcggcaccggcgtgatcggcggcatggtattcgccaccgtgctcggcgtgctgttcatc
ccgctgttcttcgtggtgatgcggcgcatgctcggcgacaagctggacgagccgtcgaag
gagtacgtggcgatccagcaggaagggcagacgcggaatcagccggatcggtga
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