Xanthomonas hyacinthi: FZ025_17890
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Entry
FZ025_17890 CDS
T06345
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy01501
beta-Lactam resistance
xhy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FZ025_17890
01503 Cationic antimicrobial peptide (CAMP) resistance
FZ025_17890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhy03036
]
FZ025_17890
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_17890
01504 Antimicrobial resistance genes [BR:
xhy01504
]
FZ025_17890
Chromosome and associated proteins [BR:
xhy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FZ025_17890
Transporters [BR:
xhy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FZ025_17890
Antimicrobial resistance genes [BR:
xhy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FZ025_17890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QGY78417
LinkDB
All DBs
Position
complement(4059412..4060647)
Genome browser
AA seq
411 aa
AA seq
DB search
MTSPLRSLALACAVVVVLASCKKQEQQAMPPPDVGVLEAKPQSLPLQRELVGRLSAYRSA
DVRARVAGVLEKRLYTEGTDVKEGQPLFQIDPAPLRASLASAQGQLASAEATYANAKVAA
ARARSLAPQAYVSRSDLDSAEATERTSAASVQQARAAVETARINLGYATVTAPIAGRAGK
QQVTEGALVGQSDTTLLTTIDQLDPLYVNFSMSSDELAQLRQAQAQGNVALNANDKSTVQ
VKLGDGSTYTQPGMLDFSDTSVDPSTGSVTLRALLPNPDRVLLPGAFVSFAANLGQRNNV
YLIPQEAIQRDAQGAYALVVGKDGKVVRKNVATVGQQENKWIISSGLQAGDQIIVSGLQK
AKEGMPAKAIPWTPGAPGQGAAPQGQAAGQPQGAANGEKPAAAADSKPEQP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgacctccccgttgcgttccctcgccctggcctgcgccgtcgtggtggtgttggcgtcc
tgcaagaaacaggaacagcaggccatgccgccgccggacgtgggcgtgctggaagccaag
ccgcagtcgctgccgctgcagcgcgaactggtcgggcgcctgtccgcgtaccgcagcgcc
gacgtgcgcgcccgcgtggccggggtgctggaaaagcgcctgtacaccgaaggcaccgac
gtgaaggaaggccagccgctgttccagatcgatccggcgccgctgcgcgcctcgctggcc
tcggcacagggtcagctggcctcggccgaggccacctacgccaacgccaaggtcgccgcc
gcccgcgcgcgcagcctggccccgcaggcctatgtgtccaggtccgacctggacagcgcc
gaggccaccgagcgcacctcggccgcgtcggtgcagcaggcgcgcgccgcggtggaaacc
gcgcgcatcaatctcggctacgccaccgtcaccgcaccgatcgccggccgcgccggcaag
cagcaggtcaccgaaggcgcgctggtcggccagagcgacaccaccctgctgaccaccatc
gaccagctcgacccgctgtacgtgaacttctcgatgagttcggacgaactggcgcagctg
cgccaggcgcaggcgcagggcaacgtggcgctgaacgccaacgacaagtcgacggtccag
gtcaagctgggcgacggcagcacctatacccagcccggcatgctggacttctccgacacc
tcggtcgaccccagcaccggctcggtgaccctgcgcgcgctgctgccgaacccggaccgg
gtgctgctgcccggcgcgttcgtgagcttcgcggccaatctcggccagcgcaacaacgtc
tacctgatcccgcaggaagcgatccagcgcgacgcccagggcgcctacgcgctggtggtc
ggcaaggacggcaaggtggtgcgcaagaacgtggccacggtcggccagcaggagaacaag
tggatcatcagctccgggctgcaggccggcgaccagatcatcgtcagcggcctgcagaag
gccaaggaaggcatgccggccaaggccatcccatggacgccgggcgcgccgggccagggc
gccgcgccgcagggccaggccgccggccaaccgcagggcgcagcgaacggcgaaaagccc
gccgccgcggccgactccaagcccgaacagccgtaa
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