Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00348
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Entry
AMD24_00348 CDS
T04108
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00300
Lysine biosynthesis
xii00550
Peptidoglycan biosynthesis
xii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMD24_00348 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMD24_00348 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xii01011
]
AMD24_00348 (murE)
Enzymes [BR:
xii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AMD24_00348 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
xii01011
]
Precursor biosynthesis
Amino acid ligase
AMD24_00348 (murE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
ALJ56529
LinkDB
All DBs
Position
369537..371009
Genome browser
AA seq
490 aa
AA seq
DB search
MKLSRLLSATKVQAISGNYDPQIASISYDSRRASPRMLFFALQGEKSDGASFAQEAIENG
AVAVVTSKQLKLQVPVIRVENPRLSLAEVASMFYSNPSSALKVAGVTGTNGKTTTTFLIR
HICSSARLPCGLIGTVVYDTGGGTLEARRTTPEAPDIQEMLARMRNYGLRACALEASSHA
STLHRLHAVEFETFVFTNLTQDHLDFHGNMEAYFNAKVEFFKRLPTQTKRAKAIINCNDR
YGRLLIERLQQHVPIIRYGLGVGADFRALSVRSGTIGTTYQLEARGRSYFVRLPLIGMFN
VHNSLAALSAASSLGIEPRAAVAALASVPQIPGRLERVPAKRSFQVFVDYAHTADALKNA
LLTLRMLHPSRRLIVVFGCGGDRDGSKRPLMARVANDIADWTIVTSDNPREEDPEAIISE
IRGGFFNKHYECITDREIAIFRAVSLAQAGDVVLVAGKGHEKAQEFSGRTTPFDDVEVAA
RAIAEKPVGL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaagtaggctcctttctgcgacaaaagtgcaagctatatccggtaattatgac
ccacaaattgcctcgatttcttatgattcacggcgagcaagtcctaggatgcttttcttt
gctctacaaggcgagaaatcggatggtgcctcatttgcacaagaagccatagaaaatgga
gcagttgccgttgtgacttccaaacaactgaagttgcaggttccagtaattcgtgtagaa
aatcctaggctctccctagcagaggttgcttccatgttctattccaacccatcttctgct
cttaaggtggctggagtaacaggtaccaatggcaaaaccactactactttcctaattcgg
catatttgctcgagcgctagattgccctgtgggcttattggaaccgtcgtttacgacacg
ggaggcggcacactagaagctagacgaaccaccccagaggctccagatatacaagaaatg
cttgctcgtatgcgtaactatggcttgcgtgcctgtgcattagaagcttctagtcatgcc
agcactcttcatagattgcacgctgtagaatttgagactttcgtgtttaccaatcttact
caggatcacttggattttcatggcaatatggaggcatacttcaatgccaaggtcgaattt
ttcaagcgcctccctactcaaaccaagcgtgctaaagcaatcattaactgcaacgatcgc
tatggacgtctgctaatagagcggttacagcagcacgttcccattattcgttatggacta
ggtgtaggggcagactttcgtgctttaagtgtacgttctggtaccatcggtacgacatat
caactagaagcgcgtggccgaagctatttcgttcgtcttcctctgattggtatgtttaac
gttcacaattctcttgctgcgctatccgctgctagctctctgggtatagagcctcgtgct
gcggtggccgctttagcatctgtgcctcagataccaggtaggttagaacgtgtgcctgca
aagcgtagtttccaagtgttcgttgattacgctcatactgctgatgccctgaaaaatgct
ctcctgaccttacgaatgctccatccatctcgacgacttattgtcgtctttggctgcggt
ggagatcgcgacggttctaagcgcccactcatggctcgtgttgcaaacgatatagcagac
tggaccattgtgacatcagataacccacgtgaggaggatccagaggccattatctctgag
atcagagggggattttttaacaagcactatgaatgcatcactgacagagaaatcgccatt
ttccgtgctgtttccctggcgcaagcgggtgacgtcgtccttgttgcaggaaagggccat
gaaaaagcccaagaattttctggccggacgacgccctttgacgatgtagaggtggctgcg
cgtgccattgcggaaaaaccggtggggctttga
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