Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00370
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Entry
AMD24_00370 CDS
T04108
Symbol
sucB
Name
(GenBank) Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
KO
K00658
2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:
2.3.1.61
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00020
Citrate cycle (TCA cycle)
xii00310
Lysine degradation
xii00785
Lipoic acid metabolism
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01200
Carbon metabolism
xii01210
2-Oxocarboxylic acid metabolism
Module
xii_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xii_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AMD24_00370 (sucB)
09105 Amino acid metabolism
00310 Lysine degradation
AMD24_00370 (sucB)
00380 Tryptophan metabolism
AMD24_00370 (sucB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMD24_00370 (sucB)
Enzymes [BR:
xii01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
AMD24_00370 (sucB)
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Motif
Pfam:
2-oxoacid_dh
Biotin_lipoyl
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ALJ56548
UniProt:
A0A0P0G3V0
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All DBs
Position
complement(395689..396765)
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AA seq
358 aa
AA seq
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MRIEVQVPEVGESISSGVLSVWHKKNGEQAHAGEALFSLETDKISTEVNAPESGVVSTLV
SEGDEVRIGQVVATIEVVSARMVPASPSLAEPKKAPMAASFASSEEEREKKKEDGFPPKE
VEIKEDSRITRKRLSPLRKKIAAQLVSSQQSAAILTTFNECDMSAVIRIRKHLQGEFQKQ
HKVKLGFMSFFIKAAVSALRAVPIVNSRIEGDELIQNHFYNIGVAVGTERGLIVPVLRDC
EQRSFADLERELLSFAMKARSGKVALEDLQDGIFTISNGGVYGSLLSTPILNPPQSGILG
MHKIQERTAVMQGQIVIRPMMYLALSYDHRIIDGKEAATFLVHIKDCVENPARLLLVP
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtattgaagttcaagttccggaagttggagaatcgatttctagtggcgttctgtct
gtttggcacaagaagaatggggaacaggctcatgcaggagaggcacttttttctctagaa
acagataagatttccaccgaggtaaatgcacctgaatctggagtggtaagcacactagta
agtgaaggagatgaagtgcgaattggccaggtagttgcaaccattgaggttgtctctgct
aggatggtgcctgcttccccttcccttgcagagcctaagaaggcacctatggctgcctca
tttgccagttctgaggaggagagggaaaagaagaaggaggatggttttcctccaaaagag
gtggagataaaggaggattcccgaattacacgtaaacgcctttctccactccgcaagaaa
atcgcagcccaattggtatcttcacagcaatctgcagctattctaactacattcaatgag
tgtgacatgagcgcggttatcaggattcgcaagcacctccaaggagaatttcaaaagcaa
cataaggtgaagctaggttttatgtctttttttattaaagctgcagtaagtgcactacga
gcagtacctattgttaattctcgcatagaaggcgacgaacttatccaaaaccacttttac
aatattggcgtcgctgtaggtactgaacgcggactaattgtccctgtattacgtgactgt
gagcaaaggtcctttgcagatcttgagcgggagctgttaagttttgcgatgaaggcgcga
tcaggtaaagtggcccttgaagatttacaggacggcatatttaccatttccaacggagga
gtgtatggttccctgttaagcactccgatccttaatcctcctcaaagtggtattctaggg
atgcacaagattcaagagcggacggctgttatgcaagggcagatagtgattcgtcccatg
atgtatcttgctctcagctacgaccaccgtataattgacgggaaggaagcagcaactttt
ttggtccacattaaggactgtgtggagaatcctgccagactgctcctggtgccctaa
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