Xenopus laevis (African clawed frog): 100505446
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Entry
100505446 CDS
T01010
Name
(RefSeq) nectin-2beta precursor
KO
K06531
poliovirus receptor-related protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03266
Virion - Herpesvirus
xla04514
Cell adhesion molecules
xla04520
Adherens junction
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
100505446
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100505446
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100505446
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100505446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
100505446
04090 CD molecules [BR:
xla04090
]
100505446
Cell adhesion molecules [BR:
xla04515
]
Immunoglobulin superfamily
Nectin family
100505446
CD molecules [BR:
xla04090
]
Proteins
100505446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
C2-set_2
I-set
Ig_2
ig
EphA2_TM
DUF6479
Ig_VEGFR-1-like_5th
FAM163
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
100505446
NCBI-ProteinID:
NP_001184211
UniProt:
D5JEJ7
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All DBs
Position
7S:95528649..95569362
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AA seq
466 aa
AA seq
DB search
MVIGAGRMQRIWAFLLVLLFPVLQAQQITVNEKVTGTLGQQVTLPCTFTSNGVDMQVTQI
MWIKDSINIATYSPQFGIHIQNTNDFNLTANPSSATLLIKSLRASDEGNYICEVTTFPGG
NRRDTTYLSVKADPKNSAEAIPVVAGDIEVPVAKCASVNGRPPSQITWRSTLPGNFATTI
NNNTDGTYTVVSIYKLVPTWTADKQEVTCAISYDSKESPIPVTLSVQYSPIVAIEGYDNN
WYLKRTGASLTCSAHGNPQPTSYTWKTADGSPLPNSVKARDNVLYVEEVDERVNTTIVCE
VTNALGSRASQQEVLVRDKPNTSGAGATGGIIGGIIAAIVGIAVIATVIMICRQQRKNQT
AEDDDLEGPPAYKPPPPSVKMQEEKFPQIQGEEMLPLKAPLEHTDTMEDPDMTPPKYWSP
TGSQDTATLEDDYLEQINPIYSELSIPQSGSHREDQGFMMSPAVYV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcggagccggcaggatgcagcgtatttgggcttttctcttggtgctgctgttc
ccagttttgcaggcacaacagattacagtcaatgagaaggtgaccggtaccctggggcag
caagtcacccttccctgcacatttaccagcaatggtgttgacatgcaagtgactcagata
atgtggataaaagatagtatcaacattgctacctacagcccccagtttggcatacacata
cagaacacgaatgattttaatctcactgccaacccgagcagcgcaacgctccttataaag
tcgctgcgggcttctgatgagggcaactatatctgtgaggtcaccaccttcccaggcggc
aaccgtagggacactacatatctcagtgtgaaagctgatccaaaaaactctgcggaagct
attcctgtagttgccggcgacatagaggttccggtagcaaaatgtgcatcggtcaatggc
agacccccttcccagatcacttggaggtcgacactccctggcaattttgctacgactata
aataacaacactgatggtacatacacggtggtgagcatttacaagctcgtcccaacctgg
actgctgataagcaagaggtcacctgcgctatatcctacgattctaaagagtcgccaatt
cccgtcactctgtctgtacaatacagcccaattgttgccatcgaaggatacgataacaat
tggtacctgaaacgtactggggcctctcttacctgcagcgcacatgggaacccccaacct
acttcatacacctggaaaacggctgatggctcgccgctcccaaactcggtgaaagccaga
gataatgtgctgtatgtggaagaagtggatgagcgagtgaatacgacaatagtttgcgag
gtgaccaatgccctagggagccgagcatcacaacaggaggtgctagtgagagataaacca
aacacttctggagcaggtgccactggtggaatcattggaggaatcattgcagccattgtt
ggtatagccgttattgccacagtgatcatgatctgccggcaacagcgaaagaaccagacg
gctgaagatgatgacttagaggggcccccagcatataaaccacctcctccatctgtaaag
atgcaagaagaaaagtttcctcagatccaaggagaagagatgcttccactcaaggctcct
ctggagcatacagacaccatggaagatcctgatatgacaccccccaagtactggtcgccc
actggatcacaggacactgctacgttagaggatgactacctagaacagatcaatcctata
tacagcgaattgtctataccacaatctggttcccatagagaagaccaaggctttatgatg
tctcctgccgtgtatgtatga
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