Xenopus laevis (African clawed frog): 108696158
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Entry
108696158 CDS
T01010
Symbol
hps6.L
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108696158 (hps6.L)
Membrane trafficking [BR:
xla04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
108696158 (hps6.L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
OspG_kinase
Motif
Other DBs
NCBI-GeneID:
108696158
NCBI-ProteinID:
XP_018080741
Xenbase:
XB-GENE-6488274
UniProt:
A0A974CEE3
A0A1L8FJE4
LinkDB
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Position
7L:27673420..27677670
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AA seq
806 aa
AA seq
DB search
MMKFGPPKLQCDFQVFGRQHVLREALHSPESRLYHSPDGGHLFVLLPHKVLSFLRLPSQA
PLSPSAYLEKSWAAHSPPLSALLFPQSVPYGWVLTLVWQNGRAEIWSPPRSALSKGWELL
QSLDLCNSPRARLASVCSNGESLVWCEERPPSEAKLQGPSGAKIYRYCICQRRLVWEGEL
QVSLGNMKIVLHHSPLYHVLSSPSHIFMVPDCSLRTNGAKLLLVYSPQDDRINMATVDKG
LVHSKSLSECECDFKRLVYECLGYMTSQVTVSIRTFAVTVSGELLLMDAHGGVHLLHPDG
MIRCICTFDFKTLAPEVRVGIQLHGATLVCAVDTMLYLIESNTGRLLEKKILSSDEVLLM
NLPEADDIHLLTKAGIYSVSPVSSPLETGKMEPALLEMVYEEACKYYQRRSLSSAKLTVS
ELKKEGMFQAPIMLSSILSNYHRAEKAKSKMYGDHTNTMTNELQSCLSLEHLKAKIINMP
KNLTEKYCENLIDQEIVRLIHTDLDRENLTYINSLFSLFPKAAWKSVKGNLQFHQNGDGR
FIVRATVDLWKRILGPLPVGSRESYHNGVSPLFEVICESLYRFKPKWLPLFVQQAQDCSG
LPWSMSNKDNCEGVPLYKRALAVVSKGKASTTANQDCDIEIDILLYSGRPQAIIQAIHML
INLQRWERVIAETKKFSRLSPIVTKDIFITLLAEFVKHRHLDSYINQLCDICPEEMTPTD
LLRILLQNMPVEQDQPFCNGGTPLTVGLLKPLFNKVIQNQKAQHMKSAAMTFSPSTPPET
NHSFVNGDGLTPEICSVPDIYAPNSC
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttcgggcctcctaaattacagtgtgatttccaagtgttcggccggcagcat
gttctccgggaagccttgcacagtccggagtcacggctctaccacagcccagacggggga
caccttttcgtgctgctgcctcacaaagtcttgtcgttcctccgcttaccttcccaagcc
cccctctctccctccgcctacttggagaagtcctgggccgcgcactctccgccgctttca
gccttactcttcccgcagagtgttccgtacggctgggtgcttaccctggtctggcagaat
ggccgagctgagatatggagcccgcccagaagcgccctcagcaaaggctgggaactgcta
cagtcgctggatctgtgcaacagcccccgagcccgccttgcgtctgtctgcagcaatggg
gagagcctggtgtggtgcgaagagaggcctccatctgaggcaaagctacaggggccctca
ggggccaaaatttaccgctactgtatctgtcagaggagactagtgtgggagggggagctg
caagtctccctgggaaacatgaagattgtcctgcaccacagtcccttgtaccacgtgctc
tcatcccccagtcacatattcatggtccctgactgcagcctcaggactaatggtgccaaa
ctcctgcttgtttattcccctcaggatgacaggatcaatatggccaccgttgataagggg
ctagttcacagcaaaagtctatccgagtgcgaatgcgactttaagagactggtgtatgaa
tgcctgggctacatgactagtcaggtaactgtcagcatccgcacctttgccgtgaccgtt
tcgggggagctgctgctaatggatgcacacggcggggttcacttgcttcatccagacggg
atgataaggtgcatctgtaccttcgatttcaaaacacttgctccagaagtcagagtcggc
attcagctacatggggctacactggtgtgtgctgtagacacgatgctgtacctcatcgag
tcaaataccgggagactattggagaaaaaaatactaagctccgatgaagttcttctaatg
aacctcccggaagcagatgatattcatctcctgacaaaggccgggatttattcagtttcg
cctgtgagcagcccgctagagactggcaaaatggagccggccttgctggaaatggtctac
gaagaagcctgcaagtattatcagaggagaagcctgagcagcgccaaactgaccgtgtca
gaactgaagaaggagggaatgtttcaagcacccataatgctctcctccattctcagcaac
taccatagagcggaaaaggcgaaaagcaaaatgtacggagaccacacaaacactatgacg
aatgagctacagagctgcttaagtctggagcatctgaaggccaagatcataaacatgcct
aagaatctgacagaaaaatattgtgagaatttgatcgaccaagaaattgtccgtctcatt
cacacggatttagacagagagaacttgacttatataaattcccttttcagtctgtttcca
aaggcggcgtggaagtctgtaaaaggcaatcttcagttccatcaaaacggcgacgggagg
tttattgtgagggccaccgtggatttgtggaaaaggattttggggccacttcctgttgga
tcgagggaaagttatcacaatggagtcagcccactgtttgaggtcatctgtgagtcgtta
tatagattcaagcccaagtggctcccgctttttgttcagcaggcccaggattgttctggg
ctcccctggagcatgagtaacaaagataactgtgaaggtgttccattgtataaaagagca
ctagctgttgtaagcaagggcaaggcaagcactacagcgaatcaggactgtgatatcgaa
atcgatattttgttgtacagtggccggccccaggccatcattcaagctattcatatgctg
atcaatctccagcgctgggagagagtcattgcagagaccaagaagttctctcggctgagc
ccaattgttacaaaggatatttttattactcttctggcagaatttgtcaagcacagacat
ttggattcttatataaatcagctctgtgacatttgtcctgaagaaatgacccctactgac
ctactgcgcattcttctacagaacatgcctgtggagcaggaccagcccttctgtaatggt
gggactccattgactgtaggcttgctgaagccattgttcaacaaagtcatccagaatcaa
aaggcacaacatatgaagtccgcagcaatgactttttctccatctaccccaccagagaca
aatcactcttttgttaatggcgatggtttaacgccagaaatctgctccgtgcctgatata
tatgctcccaattcttgttaa
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