Xenopus laevis (African clawed frog): 108697268
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Entry
108697268 CDS
T01010
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108697268
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108697268
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GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
GapR_DNA-bd
Motif
Other DBs
NCBI-GeneID:
108697268
NCBI-ProteinID:
XP_041427579
UniProt:
A0A8J1LEY3
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Position
7S:complement(103356384..103423015)
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AA seq
1215 aa
AA seq
DB search
MADNIQKDQSWIPKLFKKKTCTTFIEDTKNISPTKLCQCGAFMINHVSVAMEDNFGAAIV
SKWNSAEHTTEESTDAYGDIEFVGAGKKHSKFIRLSNDTDPASVYSLITYNWKIPPPNLV
VSVVGGDGDFKMKTWLKDILRKGLVKAAQSTGAWIMTGGMQVGIGKYVGEAVRDHATSNS
NSRTKVVAMGIAPWGIVHNRQSLMNPKGSFPATYYMDSVDGPTYSLDNNYSVFLLADDGT
HGQMGGETSFRFRLEEHISRQKTGVGGKGSIEIPVLCMLIAGESKMLERVYNATKSPIPC
LLVAGSGGVADCLAEILEESLAQESIRGLIEEKLKHYFPNENLTKMVQKVERIVENRDLV
TVYSDSDGTEDFETVILKALVKACKKQSSDATEYLDELKLAVAWNREDIAKTELFHGEIL
WRATDLDDTMTDALINNKPKFVKLFVDNGLNIVDYLTYGRLEELYSSVLDNTLLHQLLKN
KHDERRNSNKVHHEFPLMDSNGKGMEFKLYEVSKILRDLLGDVCAPFYTHVLGNITRRHS
AKKAQEHITVEKYEPKKSTSPWIDLFIWAILQNRDEMASYFWEMGSEAVSSALAAMKLLK
DLSRMQSEAEESLAMRDLAARFEQLAIGVFNECYRNSENRAFKLLVRRSSIWGGATCLQL
AYEADARNFFAQDGVQSMLTDNWWGQMAQNTPVWAMVLTFFCPPLIYTDLITFKSIDHEN
GIESAHRMEMDSLDTDIKTTVAEIMEGEDKQDNEEQAEEVPLKKMSVKKSKKVKAPEAEI
MKHKQRPKWMQRWKQFWSAPVTSFFGNVVMYFAFLFLFSYVLLLEFKMPPPDGPANSELI
LYFWVFTMVCEEIRQSFFVGTMPVAQKVKQYLQDSWNHVDIIALCLFIIGVICRMFNESF
EAGRTILCFDFMVFTLRLIHIFAVNKQLGPKIIIVRKMMKDVFFFLFFLGVWLIAYGVAT
EGLLHPNDMRLSWIFRRVFYRPYLQIFGQIPQEEFDAAKIAASNCTDDPIAIMLEEAEPC
TNTYANWLVILLLVVFLLVANILLLNLLIAMFSYTFSKVQGNSDIYWKFQRYNLIVEYHN
RPALAPPFIIISHINTFIKRKIRKVASQKIRHFMLELTETLDNRMLIWEAVQKENYLVNV
AKHKRDSDTERLRRTSQKVDIALKQLNEIKEHDRRMKVMETELEYCRNALSWIVDALQHS
EVVKTTRSPPVFNEG
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacattcaaaaagaccagagctggattcccaagttgtttaaaaagaaaaca
tgtactaccttcatagaagacacaaagaacatcagcccaacaaaactgtgccagtgtggg
gcattcatgataaatcatgtgtcagtggcaatggaggataattttggtgcagccatcgtc
agtaagtggaactctgcagaacacacaacggaggaatctaccgatgcctacggagatatt
gagtttgtgggtgctgggaaaaaacatagcaagttcatccgcttgtccaatgacactgac
ccagcgagcgtgtacagtctcataacctacaactggaagatccctccaccaaacctggtg
gtctctgttgtgggtggagatggcgactttaaaatgaagacatggctgaaggacatcctg
aggaagggactggtcaaggctgctcagagcacgggtgcctggataatgacaggggggatg
caggtgggcattggcaaatatgtaggggaggcagtgagagaccacgccacctccaactcc
aattccaggaccaaagttgttgcaatgggaatcgctccctggggaattgtacacaaccgg
cagagcttaatgaatcccaagggatcttttccagccacatattacatggacagcgtggat
ggacccacgtattccttggacaacaattactctgtattccttctcgcagatgatgggaca
cacggacagatgggtggcgagacaagtttccgattcaggctggaggaacacatttccaga
caaaaaactggagttgggggcaaaggaagcattgagatcccagtcttgtgcatgttgata
gctggagaatcgaaaatgctggagagagtatataatgccacaaaaagcccgatcccatgt
ctgctggtggctggttcaggaggggtcgctgactgcttggctgaaatcctggaggaatcc
ttagctcaggagtctattaggggtttgatagaagaaaaactgaaacattattttcctaat
gagaacctaacaaaaatggtgcaaaaggtcgagagaattgtggagaacagggatctggtt
actgtctattcagactctgacgggactgaggactttgaaactgtaatcttaaaagcactg
gtaaaagcctgcaagaaacagtcaagtgatgccacggaatacctggatgagcttaaactg
gcagttgcctggaaccgagaggatattgccaaaactgagctgttccatggggagattctc
tggcgggcaactgaccttgatgacacaatgactgatgccctgataaacaacaagcccaag
tttgtgaagcttttcgtggacaatggcttgaacattgtggattacttaacctacgggcga
ctcgaggaactgtacagttctgtgctggacaacactctcctccatcaattgctaaagaac
aagcacgacgaacggaggaattcaaacaaagtccatcatgaattcccactgatggattct
aatggcaaagggatggaattcaaactttacgaggtttccaagatcctacgagacctgttg
ggtgatgtctgtgctcctttctacacacatgtcctgggaaatattaccagaagacactca
gccaaaaaagctcaggaacacatcactgtggaaaagtatgaaccaaagaagtcaacatct
ccatggatagatctctttatttgggcaatattacagaatcgagatgaaatggcctcttac
ttctgggaaatgggctctgaagctgtttcctctgctctggctgctatgaagcttcttaag
gatctttcccgaatgcaatccgaggctgaagaatctttagccatgagggatctagcagca
aggtttgagcagcttgctataggagtatttaatgagtgctacagaaacagtgaaaatcga
gcatttaagctccttgtgcgtcgctccagcatctggggaggagccacgtgtctgcagctg
gcttatgaggctgatgctcgcaatttctttgcccaggatggcgttcagtcaatgttgaca
gacaactggtgggggcaaatggctcagaacacccctgtatgggcgatggtgctgactttc
ttctgtccgcctctgatttatacagacctgatcacatttaagtccattgaccatgaaaat
ggaatagaaagtgctcacagaatggaaatggacagcctggacactgacataaagactact
gttgcggaaattatggaaggagaagacaaacaagacaatgaagagcaagcagaagaggta
ccgctcaaaaagatgagcgtgaaaaaatccaaaaaagtcaaggcccccgaggcagaaatc
atgaaacataaacagcggccgaagtggatgcagcgctggaagcagttctggagtgcccca
gtgacttccttctttggcaacgtggtcatgtactttgctttcctgttccttttttcctat
gtgctgcttttggaattcaagatgcctcctccagatggtccagcaaattcagagcttata
ctatatttctgggtttttacaatggtgtgtgaagagatacggcagagtttctttgtgggc
accatgcccgtggctcagaaggtcaagcaatacttgcaggattcatggaaccatgttgac
atcatagccctatgtctctttatcatcggagtgatttgcaggatgtttaatgaatcgttt
gaagctggccgtacaatcctctgctttgatttcatggtgtttactctcaggctgatccat
atatttgccgtcaacaagcagctggggccaaaaatcattatagtcagaaagatgatgaag
gatgtttttttctttctattcttcctgggtgtctggctcattgcttatggagtagcaacc
gagggcctgcttcatcccaatgacatgcgtctcagctggattttccgccgggtcttctac
aggccttatctccaaatatttggtcaaatcccacaggaggagtttgatgctgccaagata
gctgcttccaactgcacggatgaccctatcgccataatgctggaagaagctgagccttgt
accaacacttatgccaactggctggtcattctcctgcttgtcgttttcctcctggttgcc
aatatccttcttctgaacctgctgatcgccatgttcagttacaccttctcaaaggtccaa
ggcaacagcgatatctattggaaattccagcgttacaacctgatagtggagtatcacaac
cgcccggccctcgctcctccattcatcatcatcagccacattaacacattcatcaagcgt
aagatccgcaaggtggcatctcagaagatccgacatttcatgctggaactgacagagact
ctagacaaccgaatgctcatctgggaagccgtgcagaaggagaactacctggtaaatgtt
gctaagcataaaagggacagtgacacagagcgtctgcgcagaacctcacaaaaggttgat
attgccttaaaacaactcaatgagataaaggaacatgaccgaaggatgaaagtgatggaa
actgagctggaatactgccgcaatgcactttcctggatagtggatgcacttcaacacagt
gaggttgtgaaaaccactagaagtccacctgtttttaatgaaggttaa
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