Xenopus laevis (African clawed frog): 108698786
Help
Entry
108698786 CDS
T01010
Symbol
traf3.L
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04620
Toll-like receptor signaling pathway
xla04621
NOD-like receptor signaling pathway
xla04622
RIG-I-like receptor signaling pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108698786 (traf3.L)
04621 NOD-like receptor signaling pathway
108698786 (traf3.L)
04622 RIG-I-like receptor signaling pathway
108698786 (traf3.L)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108698786 (traf3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
ATG16
zf-C3HC4
Cast
zf-C3HC4_2
Sina_ZnF
zf-RING_5
zf-RING_4
DUF3450
ADIP
Fas1-AflB-like_hel
GAS
Motif
Other DBs
NCBI-GeneID:
108698786
NCBI-ProteinID:
XP_018086062
Xenbase:
XB-GENE-17333929
UniProt:
A0A1L8F9Z2
A0A974C895
LinkDB
All DBs
Position
8L:88858308..88951208
Genome browser
AA seq
569 aa
AA seq
DB search
MHKPSCYNMDTGKKIDPSASVQRGNPDRSLATTIYVPEQGGYKERFLKPVEEKYKCEKCR
LVLCNPRQTECGHRFCETCMNAVLSSANSQCIACEDIITKDKVFKDNCCRREVLALQMFC
RNENRGCKELITLGNLLIHLKSDCQFEELSCPRADCKEKVIRKDLSDHIEKTCKYRETPC
KFCRNQVPLVEMQKHEEVDCPSVVIACPHMCSVKSLLRSELNAHLLECVNAPSTCSFKRY
GCTFKGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKSIQVLHNQMCS
FEIEIERHKDQLRNNESRIIQLQRVIEGQAEKLKDLDKEIRNLRETGDEADGMKSNYESL
QNRLSQLEVTAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYNGVLI
WKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMR
GEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVA
QTVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaacctagctgctataacatggatactggcaaaaagatcgatccatctgcatct
gtacaaagaggcaacccagatcgcagccttgctacaaccatctatgtgccggaacaggga
ggctacaaggaaaggtttttaaaacctgtagaggagaaatacaaatgtgaaaaatgccgc
ttggtactgtgtaaccccagacagacagagtgtggccacagattctgtgaaacttgtatg
aatgcagtactaagttcggctaactcacaatgcatagcctgtgaagatatcatcactaag
gataaggtgtttaaggataactgctgcaggagggaagtcctggcccttcaaatgttctgc
agaaatgaaaacagaggttgcaaggagctaatcacgcttggaaatctcttgatacaccta
aaaagtgactgccagtttgaagaactttcttgtcctcgcgctgactgtaaagaaaaagta
attagaaaggatttaagtgaccatatagagaagacatgcaaatacagagaaactccatgt
aaattctgcagaaaccaggtcccattggtagaaatgcagaaacatgaagaagtggattgc
ccgtctgttgtaatagcttgccctcatatgtgtagcgtgaaaagccttttgcgaagtgag
ttaaatgcacatctgttggaatgtgtaaatgccccaagtacctgtagcttcaaacgttat
gggtgcacttttaagggaacaaaccaacagattaaagcacatgaggctagctcagctgtt
cagcatgtgaatttgatgaaggaatggagtaattatctggaagcaaaggtgtccatgtta
caaaatgaaagctcggaaaagaataaaagcattcaggtattacacaaccagatgtgtagc
tttgaaattgaaatagaacgacacaaggaccagctgcgaaataatgaatcaagaattata
caactacagagagtgattgaggggcaagcagaaaagctaaaggacttggataaggaaata
agaaatctgcgcgaaaccggagatgaagctgatggcatgaagagcaattacgaatcttta
caaaatcgtctgtcacagttagaagttacagccaaaaatgcagcatcttggaatccaggc
gttttagagacgcagatcaacagacatgaccagatgctcagcgttcacgacatcaggctg
gctgacatggatcttagattccaagtgctggaaaccgcaagttacaatggggtactgatc
tggaaaatcagagactacaagagaaggaagcaagaggcagtgatggggaaaaccctctca
ttgtacagccagcctttttacacaggatattttggctacaagatgtgcgcaagagtttat
ctaaacggcgacgggatgggaaaagggacgcatttatctctattttttgtaataatgaga
ggagaatatgatgcattgcttccttggccttttaagcagaaagttagtctcatgttaatg
gaccaaggaccatcacggcgccatttaggggatgcattcaaaccagacccaaacagcagt
agcttcaaaaaacctacaggagaaatgaacattgcttctggctgccctgtgtttgtagcc
caaactgtcctggagaatgggacgtacattaaagatgatactatttttattaaagtcata
gtagatacatcagatctaccagatccttga
DBGET
integrated database retrieval system
