Xenopus laevis (African clawed frog): 108699773
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Entry
108699773 CDS
T01010
Symbol
traf3.S
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04620
Toll-like receptor signaling pathway
xla04621
NOD-like receptor signaling pathway
xla04622
RIG-I-like receptor signaling pathway
xla05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108699773 (traf3.S)
04621 NOD-like receptor signaling pathway
108699773 (traf3.S)
04622 RIG-I-like receptor signaling pathway
108699773 (traf3.S)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108699773 (traf3.S)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
ATG16
zf-C3HC4_2
Sina_ZnF
zf-RING_5
ADIP
zf-RING_4
CEP104_ZnF
GAS
DUF3450
Motif
Other DBs
NCBI-GeneID:
108699773
NCBI-ProteinID:
XP_018087810
Xenbase:
XB-GENE-17333930
UniProt:
A0A8J0TFI3
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Position
8S:complement(11412391..11511191)
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AA seq
569 aa
AA seq
DB search
MHKPSCYIMDTGKKTDPSASVQRANPDRSLATTIYVPEQGGYKERFLKPVEMKYKCEKCR
LVLCNPRQTECGHRFCETCMNAVLSSSNSQCMACEDIITKDKVFKDNCCRREVLALQMYC
RNENRGCKELITLGNLLIHLKSDCQFEELSCPRADCKEKVIRKDLSDHIEKTCKYRETLC
KFCRNQVSLVEMQKHEEVDCPSVVISCPHMCSVKSLLRSELNAHLLECVNAPSTCSFKRY
GCTFKGTNQQIKAHEASSAVQHVNLMKEWSNYLETKVSMLQNESSEKNKSIQLLHNQMCS
FEIEIERHKEQLRNNETRIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYESL
QNRLSQLEIMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYNGVLI
WKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMR
GEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVA
QTVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaacctagctgctatatcatggatactggcaaaaagaccgacccatctgcatct
gtgcaaagagccaacccagatcgcagccttgctacaaccatctatgtgccagaacaggga
ggatacaaagaaaggtttttaaaacctgtagagatgaaatacaaatgtgaaaaatgccgc
ttggtactgtgtaaccccagacagacggagtgtggccacagattctgtgaaacttgcatg
aatgcagtactaagttcgtctaactcacaatgcatggcctgtgaagatatcatcactaaa
gataaggtgtttaaggataactgctgcaggagggaagtcctggcccttcagatgtactgc
agaaatgaaaacagaggttgcaaggaacttatcacattgggaaatctcttgattcaccta
aaaagtgactgccagtttgaggaactttcttgtccgcgtgcagactgtaaagaaaaagta
atcagaaaggacttaagtgaccatatagaaaagacatgcaaatacagagaaactctgtgt
aaattctgcagaaaccaggtctcgttggtagaaatgcagaaacatgaagaagtggattgc
ccttccgttgtaatatcttgccctcatatgtgtagcgtgaaaagccttttgcgaagtgag
ttgaatgcacatttgttagaatgtgtaaatgccccaagtacctgtagcttcaaacgctat
ggatgcacttttaagggaacaaaccaacagattaaagcacatgaggctagctcagctgta
cagcatgtgaatttgatgaaggaatggagtaattatctggaaacaaaggtgtccatgtta
caaaatgaaagttcagaaaagaataaaagtattcagttattgcacaaccagatgtgtagc
tttgaaattgaaatagagcgacacaaggagcagctgcgaaataatgaaacaaggattata
caactacagagagtgatagaggggcaagcagataagctaaaggacttggacaaggaaata
agaaatctgcgccaaactggagatgaagctgatggcatgaagagcaattacgaatcttta
caaaatcgtctgtcacagttagaaattatggccaaaaatgcagcatcttggaatccaggt
gttttagagacgcagatcaacagacatgaccagatgctcagtgttcatgacatcaggctg
gccgacatggatcttagattccaagtgctggaaacagcaagttataatggggtgctgatc
tggaaaatcagggactacaaaagaaggaagcaagaggcagttatggggaaaaccctctcg
ttgtacagccagcctttttacacgggatatttcggctacaagatgtgcgcaagagtgtat
ctaaacggcgacgggatgggaaaagggactcatttatcactattctttgtaataatgaga
ggagaatatgatgcattgcttccttggccttttaaacagaaagttagcctcatgttaatg
gaccaaggaccatcacggcgccatttaggggatgcattcaaaccggacccaaacagcagt
agcttcaaaaaacctacaggagaaatgaacattgcttctggctgcccagtgtttgtagcc
caaactgtcctggagaatgggacgtacattaaagatgatactatttttattaaagtcata
gtagatacatctgatctaccagatccttga
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