Xenopus laevis (African clawed frog): 108700333
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Entry
108700333 CDS
T01010
Symbol
setdb1.S
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-like isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108700333 (setdb1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108700333 (setdb1.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
108700333 (setdb1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108700333 (setdb1.S)
Heterochromatin formation proteins
Other heterochromatin formation proteins
108700333 (setdb1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
BAHCC1-like_Tudor
Chromo_MORC2_6th
DUF4537
Oberon_cc
Motif
Other DBs
NCBI-GeneID:
108700333
NCBI-ProteinID:
XP_018088919
Xenbase:
XB-GENE-17337298
UniProt:
A0A1L8F4F5
A0A974H6T6
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All DBs
Position
8S:94949170..94996912
Genome browser
AA seq
1290 aa
AA seq
DB search
MESQEKMESQETMELEQVVVKELGISMDDLRELIDKELEKMEVVKQKKAQLLELEQLVKQ
KEAEVEHVDKLFDNATKAVDDCEALVKSLYDQIGMTYKESSSEDEGASKPVEVIEIPDED
DDDDVMSVGSGEAVSKIPKEKHLLREAMAAMKRSRQDVQSIVEAIQKKSDGPQTKFSSHP
SSTTSSVGGSNQAGASNDMSKDGDLVVGMRILGKKRTKTWHKGTLISIQCVGPGKKYKVK
FDNKGKSLLSGNHIAYDYHPPPENLTVGSRVVAKYKDGNQVWLYAGIVAEPPSNKNKMRY
LIFFDDGYASYVTHPELYPVCRPLINSWEDIEDVSCRDFIQEYVNAYPNRPMVLLKSSQL
IKTEWEGTWWKSKVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQ
AGQQRTRPNVGAIRSKGPVVQYTHDLTGNEPEHKPAAPPSPHSIPSPQLIDTDSDSQQAQ
SKKQVAKKSTSFRPGSAGSGQSSPIPTESVPPPPAAPRPFQPTQSNQSNQSAQPVQSIQP
IHNIQTIQTIQGIQTIQSIQPIQTIQTLQPIQTIQPLQTIQTLQGNRIVTSIQQFHIIHT
ENIPAETTYKAPKEKLFYLPHVCNYTCLSRIRPISHRSKNPLIVPLLYDFRRMTARRRVN
RKMGFHVLYKTPCGLSLRTMPEIERYLFETECKMLFLEMFCLDPYVLVDRKFQPQKPYYY
IPDITYGKEDVPLSCVNEIDRTPPPQVAYSKERIPGKGVFINTGADYLVGCDCTDGCRDK
SKCACHQLTIQATGCTPGAQMNSMAGYQHKRLEECLPTGVYECNKRCKCSANMCNNRLVQ
HGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLD
HIESVENYKEGYESDAKSSSDSSGVDLKEDNEENSGSDDQDESNDSSDDNFGKNEDITTS
SVWRSYATRRTTRGQKENGTSETASKDSALARQTSRDETNDCKLPEETSKNKVASWLSSN
TMADSIMDSDSRSSLKMGDAPEADKPKESEEASKYPGHGEGNRMYGYNPAPAKKDGVRRP
VSKTALHQIRRQSSSAQPTDEVLTLSSSSESEVGSGTNGSKKPAAQATANDSDDIQTISS
GSDEEEEKKHVATNAGPVKRQVAVKSTRGFALKSTHGITVKTNMASGEGGVGRRTTRQFF
DGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTEL
TWDYNYEVGSVEGKKLLCCCGSTECRGRLL
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacaggagaagatggagtcacaggagacgatggagttggagcaggtggtggtg
aaggagctgggcatttccatggatgatctgcgtgagctgatagataaagagctggaaaag
atggaagttgtgaaacagaagaaagctcagctattggaactagagcaactggtgaagcag
aaagaggcagaagtggagcatgtggacaagcttttcgacaacgctacaaaggccgtggat
gattgtgaggcgctagtgaagagtctgtacgaccagattggcatgacttacaaagagagc
agctctgaagatgaaggagcttcaaaaccagtggaggttattgagatccctgatgaagat
gacgatgatgacgttatgagcgtgggatcaggtgaagccgtgagtaagattccaaaagag
aagcatttgttacgagaagcaatggctgctatgaagagatcaagacaagatgtgcagagc
attgtagaagcaatacaaaagaagtcagatggacctcagacaaaattttcttctcatccc
tcctcaacaacaagctctgtgggtggctccaatcaggccggtgcctcaaatgacatgagc
aaagatggagaccttgtcgtggggatgcgtattctgggcaagaagagaaccaagacttgg
cacaaaggaactctgatctctatacagtgtgtgggccctggaaaaaagtacaaggtcaag
ttcgacaacaaagggaaaagcttgttgtctggtaaccacattgcttatgactaccacccg
ccacctgaaaatctgactgttggtagcagagtggtagccaagtataaagatggaaaccag
gtgtggctctatgctgggattgtcgctgagcccccaagtaacaagaataaaatgagatat
ctgatctttttcgatgatggctatgcatcctatgttacccacccagaactgtatcctgtc
tgcaggccattgatcaactcatgggaggacatcgaggacgtatcctgtcgggattttatt
caggaatacgtgaatgcttaccccaatagaccaatggttcttttgaagagtagccaactg
attaaaacagagtgggaaggaacatggtggaaatccaaggtggaagaagtagatgggagt
ctggtgaaaatacttttcctggatgacaagcgttgtgaatggatctaccgtggttctaca
cgcctggagcccatgttcagcatgaagacatccacggcctcaacacaagagaagaagcaa
gctgggcaacaaaggacgcgtcctaatgtgggtgccatacggagcaagggtcctgtagtg
cagtacacgcatgacctgactgggaatgagcctgaacacaaacctgcagcacccccatct
cctcattcaatcccatcaccccagcttattgacacagactctgacagtcagcaggcccag
tccaagaagcaagtggccaagaaaagcacttcattccgtcccgggtcagcgggatccgga
cagtcttccccaattcccaccgagtcagtgccgccacctcctgctgctccgcgtcctttc
cagcccacccaatctaaccaatccaaccagtctgcacaacctgtccagtctattcagccc
atccacaatatacagaccattcaaactattcaaggcattcaaactatccaatcaatccag
ccaattcaaaccatacaaactctccagcctatccaaaccattcaacctctccagacaatc
cagactctccaaggaaacaggattgtgacttctattcaacaattccatataatacataca
gaaaatattccagcagagaccacctacaaggcccccaaagagaagcttttctacctccct
cacgtctgcaactacacttgcctctcccgtattcgcccgatctctcacagaagcaagaac
cccctaatagtgccactgctttatgacttccgtcgcatgactgcccgacggcgggtcaac
cgcaaaatgggtttccacgtcctctacaagacgccctgtggcctgagcttgcgtacaatg
ccggagatcgaacgttacctttttgagaccgagtgcaaaatgctcttcctggaaatgttt
tgtctggacccctatgtcttggtggatcggaaatttcagcctcaaaaaccctattactac
atccccgatatcacatatggcaaggaagatgttccactttcttgcgtcaatgaaatagac
aggacaccgccacctcaagtggcctacagcaaggagcgcatccctgggaaaggagtcttc
atcaacaccggtgccgattatcttgtgggatgtgactgcacagatggctgtcgagacaaa
tccaaatgtgcatgtcaccagttgacgattcaagccacaggctgcactccaggggcccag
atgaactcaatggctggataccagcacaagcgcttggaagaatgtcttcccactggggtg
tacgagtgcaacaagagatgcaagtgcagtgctaatatgtgcaacaaccgccttgtacaa
catgggctccaggtgcgcctccaactcttcaaaacccaaaacaagggctgggggatccgg
tgtttggatgatatagcaaaaggctcctttgtctgcatctatgcaggtaagatcctcaca
gatgactttgcagacaaagaaggtctggagatgggtgacgagtactttgctaacttggac
cacatagaaagtgttgagaactataaggaaggctatgagagcgacgccaagtcttcctct
gatagcagcggcgtcgacctcaaagaggacaacgaggaaaacagcggcagcgatgatcag
gacgagtccaacgacagttcagatgacaattttggcaagaacgaggacatcacaaccagc
tcagtgtggcgcagttatgccacccgcagaacaacaagaggccagaaggagaacggaacg
tcggagactgcttccaaggactctgctctggcccgacaaaccagtcgggatgagaccaat
gactgcaaactacccgaggagacctccaagaacaaagtggcttcctggctaagttcaaac
accatggcagactctattatggactctgacagtaggtcttccctaaagatgggagatgca
ccagaagcagataaacctaaggaatcggaagaggcgagcaaatacccagggcatggagaa
ggaaaccggatgtacggctacaatcccgctccagccaaaaaagatggcgtgcgacgaccc
gttagcaaaaccgcattgcaccagatcaggcggcagtcgagctcagcgcaacctaccgat
gaagttctgaccctctccagcagctcagagagtgaggtgggaagtgggaccaacggcagc
aaaaaacctgctgctcaggccacagcaaatgacagtgacgatatccagacaatctcatct
ggatctgacgaggaagaggagaagaagcacgtagctactaatgcaggacctgtaaaaaga
caagtggctgtaaaatccacccgaggctttgccttaaaatccacccacgggatcactgtg
aaaaccaacatggcgtcgggtgagggaggagtaggacgccggaccacgcgacagttcttc
gatggggaggagtcctgttacattattgatgcaaaacttgaaggcaacttgggtcgatac
ttgaatcatagctgcagccccaatctctttgtacagaatgtgtttgtggatacacatgat
ctgcgcttcccttgggtggccttcttcgccagcaagaggatccgcgctggtactgagctc
acgtgggattataattatgaggttggcagtgtagaaggcaagaaactcctgtgctgctgc
ggatccacagaatgtcgtgggcgcctcctgtaa
DBGET
integrated database retrieval system
