Xenopus laevis (African clawed frog): 108701767
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Entry
108701767 CDS
T01010
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108701767
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108701767
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
108701767
NCBI-ProteinID:
XP_041432758
UniProt:
A0A8J1LT74
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Position
9_10L:7374207..7443876
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AA seq
1822 aa
AA seq
DB search
MAGKMRPPGPESLRPFTRESLAAIEKRIEEEVARKAKQIEVLEGRVPKPNNGLEAGKNLP
LIYGDPPPELIGVPLEELDYFYDTQKTFIVLNKGKAIFRFTATKALYLLDPFNPFRRGAI
KVLIHSLFSLFIMFTILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKIFARGFCIDS
FTFLRDPWNWLDFCVIVMAYTTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLAVFALIGLQLFMGNLRHKCVRWPPPADYFMLYDNSTLNTTLYND
TMINSTLSNSTEVFDNYTIDWHAYLNDEANFYFLDGANDALLCGNSSDAGKCPESYTCMK
TGRNPNYGYTSYDSFNWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMVFFVLIIFLGSFY
LINLILAVVAMAYAEQNEATIQEEIEKEKEFQELLEQLKKHQENERRKSSVASVGLIDTE
KKKALSEHSLAGDGTENMDCNGRTVPKVIIERAPSLEDTSSAQSDQQRNSKIYLEEPTLQ
QRAASTRSVVSEVALEELEEAHQKCPPWWYKFANTFLIWDCCVLWVKFKEFVRFVVMDPF
VDLGITICIVLNTLFMAMEHYPMTERFENVLSVGNLVFTGIFAAEMFFKIIALDPYYYFQ
VGWNIFDSIIVTLSLVELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGA
LGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIASDCELPRWHMHDFFHSFLIVFRILC
GEWIETMWDCMEVAGQAMCLVVFMMVMVIGNLVVLNLFLALLLSSFSADNLSASDDDGEM
NNLQIAIGRITRGIDFVKKTFFSILHFKRKPKTEQEEEDHPNKENIALNHVETEPEPKSE
LEPKTEPPLIDGVTKKTRYFMDDYDRANFFNNPNIRIEVPIASEESDFDIPDTDELSTQS
EVEELKKKYDDGSSVCSTVDYKPPEPDEEEEALEHKEDEGPEECFTKDCVRRFPCLYVDI
TTEKGKLWWNIRKTCFVIVEHNWFETFIIFMILLSSGALAFEDVYIEQRQVIKTILEYAD
KVFTYIFVFEMLLKWTAYGFKIYFTNAWCWLDFLIVAVSLISLTANWMGYSELGPIKSLR
TLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRC
INTTTSELFEVNVVNNRSECSALNHTEQVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDI
MYAAVDSRNIEDQPQYEINLYMYLYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPANEIQGLVYDFVMKQLFDIVIMILICLNMVT
MMIETDDQSQEKTDILFKINLVFIVVFTGECVLKMFALRYFFFTIGWNIFDFVVVILSIV
GIVLSDLIAEYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSG
PPDCDPHMENPGTTVSGNCGNPAIGIVFFCSYIIISFLVVVNMYIAIILENFNVATEESG
EPLCEDDFEMFYETWEKFDPDATQFVEYSRMSDFVDTLQDPLRIPKPNKIKLITLDLPMV
TGDKIHCLDILFALTKEVLGDSGEMDALKESMEEKFMAANPSKVSYEPITTTLKRKQEEV
CAIKIQRAFRRHLLRRSVKHASYIFRQSNDEESSAEDPPEKEGLIADRINAAYGKNVEEG
RNGGAHRPRSTNRSSRSSIGYD
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaagatgcgccctcccggtcctgagagtttgcgtccttttaccagagagtcc
ttggctgcaatagagaagcgaattgaggaggaggttgcccggaaagccaaacagattgaa
gtgctcgaagggagagtaccgaaacccaacaatggactggaggctggaaagaacttgcct
cttatatatggagatcctccacctgaacttattggggttcccttagaggaactagattat
ttttatgacactcaaaagacatttatcgtcttaaacaaagggaaagcaatattccgattc
acagccacaaaagccttgtatttactggatccatttaatccattcagaagaggcgcaatt
aaagtcttaatccattcattgtttagcttatttattatgtttaccatcttaacgaattgt
gtttttatgaccatgagtgacccaccaccgtggtccaagaatgtagagtacacgtttact
ggaatttacacctttgagtccttaataaaaatcttcgctcggggattttgtattgacagt
tttacattcctcagagatccctggaactggctggatttctgtgtcattgttatggcatac
accacagagtttgtagatttggggaatgtgtctgctctcaggacattccgtgtactccgt
gctcttaaaacaatcacagtaattccaggcctgaagaccattgttggtgccttgatccag
tcagtgaagaaactctccgatgtgatgatcctcactgtcttctgtcttgctgtctttgcc
ctcattggccttcagctctttatgggaaatctgaggcacaaatgtgtccgatggccaccc
cctgctgactacttcatgctatatgacaacagtaccttaaacaccaccctatataatgat
acaatgatcaattctactctcagcaatagcacagaggtgttcgacaactacaccattgac
tggcatgcctacctcaacgatgaagcaaatttttacttcctggatggagcaaatgatgct
cttctatgtggcaacagcagcgacgctgggaaatgtccagaaagttacacttgtatgaaa
actggaagaaatccaaattacgggtacaccagctacgactcattcaactgggctttcctt
tcccttttccgattaatgacacaggactactgggagaatcttttccagttgaccctacga
gcagctggtaaaacctacatggtcttctttgtgctgataatatttctggggtctttctac
ctgattaacttgatccttgctgtggtggccatggcatatgcagaacagaatgaagccacc
atccaagaagaaatagaaaaagagaaagagttccaggagcttttggagcagctgaagaaa
catcaagaaaatgaacgtaggaagtccagtgttgcctcagttgggctcatcgacacggaa
aagaaaaaggctctttcagaacacagtcttgctggagacggcacagaaaatatggactgc
aacgggcgaacagtgcccaaagttattattgaacgcgcaccctctttggaggatacaagc
tcagcacagtcagatcaacagaggaattctaagatttatttggaggagccaactctacag
caaagggcagcgagtacccgcagtgtcgtgtcagaagttgctcttgaagaactggaagag
gctcatcaaaaatgccctccctggtggtacaagttcgctaacacctttttgatctgggat
tgctgcgtcctatgggtgaagtttaaggaatttgtacggtttgtggtcatggatccattt
gtcgacttgggaatcaccatttgcatcgtgcttaacaccctttttatggccatggaacac
tacccgatgacggagcggtttgagaatgttctgagcgtaggaaacttggtatttactggc
atatttgcagctgaaatgttcttcaagatcatagccctagatccttactactacttccaa
gtggggtggaatatatttgacagcattatagtcaccttgagtttggtggagttgggtctt
gcaaatgtggaaggtctgtctgtgctcagatcattccgtctgctcagggtattcaagcta
gccaaatcatggccaacccttaacatgctcatcaaaatcatcggcaactcagtgggagct
ctgggaaacctcaccctggtgttggcaattattgtcttcatctttgcggtggtggggatg
cagttgtttgggaagagctacaaggaatgcgtgtgcaagattgcctccgactgcgagctg
ccacggtggcacatgcatgacttcttccactcttttctcattgtctttcggatcctgtgc
ggggagtggatagagacgatgtgggactgcatggaagtagcggggcaagccatgtgcctg
gtcgtgtttatgatggtcatggtgatcggtaacctggtggtcctcaatctctttttggct
ttgttgctgagttccttcagcgcagacaatttatcggcctcggacgacgatggggagatg
aacaacctacagattgccattggaaggatcaccaggggcattgactttgtgaagaaaacg
ttcttctctatcctgcacttcaagaggaagccaaaaaccgagcaggaagaagaggaccac
cctaacaaagaaaacattgctctcaaccacgtagagacagaaccagaacccaagtcagaa
ctggaacccaagacagaacctccactgattgatggtgtgactaaaaaaacacgttatttc
atggacgactatgaccgtgccaatttttttaacaacccaaacattcgtatagaagttcct
atcgcctcagaagagtccgactttgacattccagatacggatgagcttagcacacagtcg
gaggtggaggagctcaagaagaagtacgatgatggctcttcagtgtgtagcacagtagat
tacaaaccaccagaacctgacgaggaagaggaggcccttgaacacaaagaagatgaaggc
ccagaggaatgtttcactaaggattgtgtacgaagattcccttgtctttatgtcgacatc
acaacagaaaaagggaaactttggtggaacattcggaaaacatgtttcgtgattgtggag
cacaactggtttgaaaccttcatcatcttcatgatcctactcagtagtggagcactggca
tttgaagatgtctacattgaacagaggcaagtgataaagactatcctggagtatgctgat
aaagtcttcacatatatctttgtgtttgaaatgctactgaagtggacggcgtacggcttt
aagatctatttcacgaatgcctggtgttggctggatttcctaattgttgctgtgtcttta
atcagcctgacagccaactggatgggctactctgaacttggccccatcaaatcccttaga
accttgagggccctcagaccgttacgagcattgtcaagatttgaaggcatgagagtggtc
gtgaacgcccttctaggagccattccatctatcatgaatgtcctgctggtttgtttgatc
ttctggctcatcttcagcattatgggcgttaatctctttgccgggaaatattatcgatgc
atcaacacaaccacgtcagaattatttgaggtcaacgtggtcaacaaccgttccgaatgc
tccgctttaaaccatacagagcaagtgcgatgggttaatgtcaaagtgaattttgacaat
gtgggccttgggtatctctcccttctacaagtggcaaccttcaaaggctggatggatatc
atgtatgctgctgtagattcccggaatattgaggaccagccacaatacgaaataaatctc
tatatgtatttgtactttgtcatattcatcatttttggagctttcttcactctaaacctg
tttatcggtgtcattatcgacaacttcaaccagcaaaagaaaaagtttggaggtaaggac
atctttatgactgaggaacagaagaaatactacaacgctatgaaaaagctgggatccaaa
aaaccccaaaaaccaattccaagacccgcgaacgaaattcaaggtttggtgtatgacttt
gtcatgaagcagctctttgacattgtgattatgattctaatttgcctcaacatggtgacg
atgatgattgaaacagatgaccagagccaggaaaaaactgatattcttttcaagatcaat
ctggtgttcattgtcgtcttcacgggtgaatgtgttctcaaaatgtttgctctgaggtac
ttctttttcacaatcggatggaacatatttgactttgtggtggtcatcctttctattgtt
ggtattgttctctcggatctcatagcagaatactttgtttcaccaacccttttcagagtc
atcagactggcgagaatcggtagagttcttcgtctcattaaaggagcaaaggggattcgc
acactactatttgccctaatgatgtctctccccgctctgtttaacatcgggcttctgctc
ttcttagttatgttcatctattcaatcttcggaatgtccaattttgcctacgtaaagaaa
gaatctggaatagacgacatatttaattttgaaacctttggaaacagcataatatgcttg
ttccaaatcaccacgtctgctggttgggatggtcttctaaatccaatcctaaatagcggc
cctccagattgtgaccctcatatggagaaccctggaacaacagttagcggtaattgtggt
aatccggctataggtatagttttcttctgcagctacatcataatttcatttttagttgtt
gtcaatatgtacattgccattatcctggagaactttaatgttgccactgaagagagcggc
gagccattatgtgaagatgactttgagatgttttatgaaacttgggagaagtttgatcca
gatgccacccagtttgttgaatacagtcggatgtcagactttgtagacactttgcaagac
cctctacggattccaaaacctaacaaaattaaactaattactttggatcttccaatggta
actggagataagattcactgcttggacattttgtttgcactcactaaagaggtgttgggg
gactcaggagaaatggatgccttgaaagaatcaatggaagaaaagtttatggcggcaaat
ccatcaaaagtgtcttatgaaccaatcaccaccactctcaaaaggaagcaggaagaagtc
tgtgccatcaaaatccagagggcttttaggagacatctactaaggcgttcggtgaaacac
gcttcttacatcttccgacagagtaatgatgaagagtcatcagctgaggatcctcctgaa
aaagaagggttgatagcagacagaattaatgccgcttatgggaaaaatgtagaggaagga
cggaatggtggagctcatcgcccaagatcaacaaacaggagctcacgcagcagcataggt
tatgattaa
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integrated database retrieval system
